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The map label for this gene is yhfR [C]

Identifier: 187934272

GI number: 187934272

Start: 1636000

End: 1636734

Strand: Reverse

Name: yhfR [C]

Synonym: CLL_A1579

Alternate gene names: 187934272

Gene position: 1636734-1636000 (Counterclockwise)

Preceding gene: 187935384

Following gene: 187932887

Centisome position: 43.07

GC content: 28.3

Gene sequence:

>735_bases
ATGAATGATATTAACTTAAGTGTAAAACCTAAAGAATTAAGATATGTTACTGTATATAATCAACTTTTTAAAATGATAAA
TGAAGGTACATTTAAAGAAGGTAGCAGACTTCCATCTGAACCTGAATTAGCAAAGTTCATTGGTGTGAGTAGAACAACTT
TGAGGCAGGCCTTAGCTTTACTTCAAGATGATGGTTTAATAAAGAACATTAGAGGTAAAGGTAATTTTATAATAAAATCT
GAAACTTCCAAAGACATAGGTCTTGAAAAGATAGGACATCCTGTTTATAAGTCTTTAGATGAACCAATTGACGATATTGA
AATTATTTTGCGTATAGAACCATCTACTGATTATTTTAATAAAGTTTTAATTAGAAATACTGCTGCCGTTGTACTTATTG
ATAGATGGTATAAGTATCAAGGAAAAGCCATTGCTTACACATTTACTTTGATACCAATTGAAACCATATCATCACTTAAT
ATAGATTTGAATAATAAAAAACAACTTCTAGAATTTTTAGAAAAAGAACTTTATGAAATAGCTGATGATGTATTAATCGA
ACTAAAGTATTCAACTTCCGGGAATTTTGCTGCAAAACAGCATCCAATTGCATCTGAAGATAAATTCTACTTGATTCAAG
AAACAATATTTAAAGATAATGAATTTCCAATAGTATCAAACAAACATTATCTTCCTATAAAGTCAACATCTATAAAGCTA
CATCCTACAAAATAA

Upstream 100 bases:

>100_bases
AAATTGTATTAATACTTTTCTAGGTAGTTTATGAAAAAATATGCTAGTTTAATCAGCATAATGCATAGCCTACACTAGTT
ATTGATGAAGGGTGAATTTT

Downstream 100 bases:

>100_bases
AAAAATAATTTTAATAACAATAAAATCACCTATTACTAAAATATTTTTAGTAATAGGTGATTTCGTTATATCAACTACTA
TATATCAATCTCCATAAATA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulatory Protein; Transcriptional Regulator GntR Family; GntR Family Transcriptional Regulator; Transcription Regulator; Regulatory Protein GntR HTH

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNDINLSVKPKELRYVTVYNQLFKMINEGTFKEGSRLPSEPELAKFIGVSRTTLRQALALLQDDGLIKNIRGKGNFIIKS
ETSKDIGLEKIGHPVYKSLDEPIDDIEIILRIEPSTDYFNKVLIRNTAAVVLIDRWYKYQGKAIAYTFTLIPIETISSLN
IDLNNKKQLLEFLEKELYEIADDVLIELKYSTSGNFAAKQHPIASEDKFYLIQETIFKDNEFPIVSNKHYLPIKSTSIKL
HPTK

Sequences:

>Translated_244_residues
MNDINLSVKPKELRYVTVYNQLFKMINEGTFKEGSRLPSEPELAKFIGVSRTTLRQALALLQDDGLIKNIRGKGNFIIKS
ETSKDIGLEKIGHPVYKSLDEPIDDIEIILRIEPSTDYFNKVLIRNTAAVVLIDRWYKYQGKAIAYTFTLIPIETISSLN
IDLNNKKQLLEFLEKELYEIADDVLIELKYSTSGNFAAKQHPIASEDKFYLIQETIFKDNEFPIVSNKHYLPIKSTSIKL
HPTK
>Mature_244_residues
MNDINLSVKPKELRYVTVYNQLFKMINEGTFKEGSRLPSEPELAKFIGVSRTTLRQALALLQDDGLIKNIRGKGNFIIKS
ETSKDIGLEKIGHPVYKSLDEPIDDIEIILRIEPSTDYFNKVLIRNTAAVVLIDRWYKYQGKAIAYTFTLIPIETISSLN
IDLNNKKQLLEFLEKELYEIADDVLIELKYSTSGNFAAKQHPIASEDKFYLIQETIFKDNEFPIVSNKHYLPIKSTSIKL
HPTK

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28000; Mature: 28000

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDINLSVKPKELRYVTVYNQLFKMINEGTFKEGSRLPSEPELAKFIGVSRTTLRQALAL
CCCCCEEECHHHEEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH
LQDDGLIKNIRGKGNFIIKSETSKDIGLEKIGHPVYKSLDEPIDDIEIILRIEPSTDYFN
HHCCCCEEECCCCCCEEEEECCCCCCCHHHHCCHHHHHHCCCCCCEEEEEEEECCCHHHH
KVLIRNTAAVVLIDRWYKYQGKAIAYTFTLIPIETISSLNIDLNNKKQLLEFLEKELYEI
HHHHCCCEEEEEEEEHHCCCCCEEEEEEEEEEEEHHCEEECCCCCHHHHHHHHHHHHHHH
ADDVLIELKYSTSGNFAAKQHPIASEDKFYLIQETIFKDNEFPIVSNKHYLPIKSTSIKL
HHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCEECCCEEEEEECCEEEE
HPTK
ECCC
>Mature Secondary Structure
MNDINLSVKPKELRYVTVYNQLFKMINEGTFKEGSRLPSEPELAKFIGVSRTTLRQALAL
CCCCCEEECHHHEEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH
LQDDGLIKNIRGKGNFIIKSETSKDIGLEKIGHPVYKSLDEPIDDIEIILRIEPSTDYFN
HHCCCCEEECCCCCCEEEEECCCCCCCHHHHCCHHHHHHCCCCCCEEEEEEEECCCHHHH
KVLIRNTAAVVLIDRWYKYQGKAIAYTFTLIPIETISSLNIDLNNKKQLLEFLEKELYEI
HHHHCCCEEEEEEEEHHCCCCCEEEEEEEEEEEEHHCEEECCCCCHHHHHHHHHHHHHHH
ADDVLIELKYSTSGNFAAKQHPIASEDKFYLIQETIFKDNEFPIVSNKHYLPIKSTSIKL
HHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCEECCCEEEEEECCEEEE
HPTK
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA