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The map label for this gene is yisV [H]

Identifier: 187932887

GI number: 187932887

Start: 1630729

End: 1632189

Strand: Reverse

Name: yisV [H]

Synonym: CLL_A1574

Alternate gene names: 187932887

Gene position: 1632189-1630729 (Counterclockwise)

Preceding gene: 187934272

Following gene: 187933435

Centisome position: 42.95

GC content: 25.26

Gene sequence:

>1461_bases
TTGATATTTTCTACTCTTAATATCAATAAAAATAAACCTATTTATTTACAAATAAAACAACATATTATTAATGGAATAAA
AAAAGGTGAATTAAAAAGAGATAGTAAACTTCCTTCTACAAGAGAAGTAAGTAAATTTTTAAATATAAGTAGAAATTCCG
TTATTTCTGCTTATGAAGAATTAGAAAGCAACGGGATTATAGTTACTAAAAGAGGTATTGGTACTTTTATTGCAATAGAA
AGTGAAACTAAATGTTATTCCTATAATATAGACTACTCTTCTATGACAAATGATTATTCTAATAATCTTAGAAATTTGGA
TATAATAAAAGATGAATTTCCTTATAAAAAAGGTCTAATATCCTTTAAGTCTATAGCACCTGAAAGTAATCTTTTCAATC
TTGATGATTTTAAAAGAGCTTTATTAGACGCATGGTCATATGAAAATACTAACCTTTTAAACTATGGGTATGCCAAAGGA
TACAAGCCACTAATTGATTATTTTTTTGATTATATGATAAAAAAAAGAGTTAATGTAGATAGTAAAGATATTTTAATAAC
AAATGGTTTTACAGAAGCTTTTGATATAGTAATGTCTTCTTTAACTACAAAAGGCGATACTATTATTTGTGAAAAGCCTA
CTCATAATACTGCAATAAAAATAATGAAATCATATGGTTTAAATGTTGTACAAATTAATATGGATAAGGATGGTTTAGAT
TTAATTGAACTCGAAAAAGGATTAAGTGAGTGCAAACCTAAATTTGGATACTTAATACCTTCTTATAATAATCCAACTGG
TATTGTAACTAAGAGTGAAAGGCGAAAAGAAATATATAATCTTTTTAGAAAATATTCCGTTCCAATAATAGAAGATGGAT
TTAATGAAGAACTTTTATATTCTAGTTCTCCAATTGATCCTATAGCATCTTTAGCTGGAGAGGGTAATGGTATTATATAT
ATAGGTAGCCTTTCAAAAATTTTATTTCCTGGACTTAGAATTGGTTGGATATTTGCTGATCAAAAACTTATAGATATTTT
AGAAAGTGTAAAACGTGGAAAAACAATTCACTCTTCTTTTTTAGACCAAAGTGCTTTCTATTATTATTTAAAAAGTGGTT
CTTTTAATAAATATTTGAAGAATGTTAGAAAATATTATAAAGATAAATATAATCTTGTTATCGAAACGATAAATAATCAC
ATTCCTTATGAATATATAACTGGTGAGGGTGGTCTACATATTTTTATTAAATTAAAAGATCATATAAATTCCAGACAACT
ATTAGAATTATGTTATAAAGATGGAGTTATCTTTATGCCTGGAGATATTTTTTATGAAGGTAATGCTGATGAGACTACTT
TTAGAATTGGGTTCGGTAGAGTAACTGATAATGATATAAGAATAGGTATTAAAATCATAGGAGATAATATAAAATTTTTA
TCAAGAAAATCTAAAATATAA

Upstream 100 bases:

>100_bases
TGAATACTTATATAGATTTCATAAAACTTTATACAAAAAATATAATTAATATATTGTAATGTATAAAAATAAAATGTATT
TAAACATGAGGTGATTAAAT

Downstream 100 bases:

>100_bases
GATAAACCACTCTTTATGCAAATTAAAAACTTAGTGGTTCTTTCATTAAAGTATCTACTTTAATAAAATAATATTATAAA
ACAAACTATACTTTATTAAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MIFSTLNINKNKPIYLQIKQHIINGIKKGELKRDSKLPSTREVSKFLNISRNSVISAYEELESNGIIVTKRGIGTFIAIE
SETKCYSYNIDYSSMTNDYSNNLRNLDIIKDEFPYKKGLISFKSIAPESNLFNLDDFKRALLDAWSYENTNLLNYGYAKG
YKPLIDYFFDYMIKKRVNVDSKDILITNGFTEAFDIVMSSLTTKGDTIICEKPTHNTAIKIMKSYGLNVVQINMDKDGLD
LIELEKGLSECKPKFGYLIPSYNNPTGIVTKSERRKEIYNLFRKYSVPIIEDGFNEELLYSSSPIDPIASLAGEGNGIIY
IGSLSKILFPGLRIGWIFADQKLIDILESVKRGKTIHSSFLDQSAFYYYLKSGSFNKYLKNVRKYYKDKYNLVIETINNH
IPYEYITGEGGLHIFIKLKDHINSRQLLELCYKDGVIFMPGDIFYEGNADETTFRIGFGRVTDNDIRIGIKIIGDNIKFL
SRKSKI

Sequences:

>Translated_486_residues
MIFSTLNINKNKPIYLQIKQHIINGIKKGELKRDSKLPSTREVSKFLNISRNSVISAYEELESNGIIVTKRGIGTFIAIE
SETKCYSYNIDYSSMTNDYSNNLRNLDIIKDEFPYKKGLISFKSIAPESNLFNLDDFKRALLDAWSYENTNLLNYGYAKG
YKPLIDYFFDYMIKKRVNVDSKDILITNGFTEAFDIVMSSLTTKGDTIICEKPTHNTAIKIMKSYGLNVVQINMDKDGLD
LIELEKGLSECKPKFGYLIPSYNNPTGIVTKSERRKEIYNLFRKYSVPIIEDGFNEELLYSSSPIDPIASLAGEGNGIIY
IGSLSKILFPGLRIGWIFADQKLIDILESVKRGKTIHSSFLDQSAFYYYLKSGSFNKYLKNVRKYYKDKYNLVIETINNH
IPYEYITGEGGLHIFIKLKDHINSRQLLELCYKDGVIFMPGDIFYEGNADETTFRIGFGRVTDNDIRIGIKIIGDNIKFL
SRKSKI
>Mature_486_residues
MIFSTLNINKNKPIYLQIKQHIINGIKKGELKRDSKLPSTREVSKFLNISRNSVISAYEELESNGIIVTKRGIGTFIAIE
SETKCYSYNIDYSSMTNDYSNNLRNLDIIKDEFPYKKGLISFKSIAPESNLFNLDDFKRALLDAWSYENTNLLNYGYAKG
YKPLIDYFFDYMIKKRVNVDSKDILITNGFTEAFDIVMSSLTTKGDTIICEKPTHNTAIKIMKSYGLNVVQINMDKDGLD
LIELEKGLSECKPKFGYLIPSYNNPTGIVTKSERRKEIYNLFRKYSVPIIEDGFNEELLYSSSPIDPIASLAGEGNGIIY
IGSLSKILFPGLRIGWIFADQKLIDILESVKRGKTIHSSFLDQSAFYYYLKSGSFNKYLKNVRKYYKDKYNLVIETINNH
IPYEYITGEGGLHIFIKLKDHINSRQLLELCYKDGVIFMPGDIFYEGNADETTFRIGFGRVTDNDIRIGIKIIGDNIKFL
SRKSKI

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=399, Percent_Identity=25.062656641604, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI33469970, Length=399, Percent_Identity=25.062656641604, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI4507369, Length=267, Percent_Identity=26.2172284644195, Blast_Score=72, Evalue=2e-12,
Organism=Escherichia coli, GI1787710, Length=472, Percent_Identity=22.6694915254237, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1790797, Length=473, Percent_Identity=21.9873150105708, Blast_Score=127, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6321236, Length=395, Percent_Identity=23.2911392405063, Blast_Score=90, Evalue=7e-19,
Organism=Drosophila melanogaster, GI21356535, Length=392, Percent_Identity=26.7857142857143, Blast_Score=98, Evalue=1e-20,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 55701; Mature: 55701

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSTLNINKNKPIYLQIKQHIINGIKKGELKRDSKLPSTREVSKFLNISRNSVISAYEE
CEEEEEECCCCCCEEEEEHHHHHCCHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
LESNGIIVTKRGIGTFIAIESETKCYSYNIDYSSMTNDYSNNLRNLDIIKDEFPYKKGLI
HCCCCEEEEECCCEEEEEEECCCEEEEEECCHHHHCCHHHCCCCCCEEECCCCCHHHCCE
SFKSIAPESNLFNLDDFKRALLDAWSYENTNLLNYGYAKGYKPLIDYFFDYMIKKRVNVD
EHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCC
SKDILITNGFTEAFDIVMSSLTTKGDTIICEKPTHNTAIKIMKSYGLNVVQINMDKDGLD
CCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCH
LIELEKGLSECKPKFGYLIPSYNNPTGIVTKSERRKEIYNLFRKYSVPIIEDGFNEELLY
HHHHHHHHHHCCCCCCEEEECCCCCCCEEECHHHHHHHHHHHHHCCCCEEECCCCCCEEE
SSSPIDPIASLAGEGNGIIYIGSLSKILFPGLRIGWIFADQKLIDILESVKRGKTIHSSF
CCCCCCHHHHHCCCCCCEEEECCCHHHHCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHH
LDQSAFYYYLKSGSFNKYLKNVRKYYKDKYNLVIETINNHIPYEYITGEGGLHIFIKLKD
HCCCEEEEEEECCCHHHHHHHHHHHHCCHHEEEEEECCCCCCEEEEECCCCEEEEEEEEC
HINSRQLLELCYKDGVIFMPGDIFYEGNADETTFRIGFGRVTDNDIRIGIKIIGDNIKFL
CCCHHHHHHHHHHCCEEECCCCEEECCCCCCEEEEEEECCEECCCEEEEEEEECCCHHHH
SRKSKI
HHCCCC
>Mature Secondary Structure
MIFSTLNINKNKPIYLQIKQHIINGIKKGELKRDSKLPSTREVSKFLNISRNSVISAYEE
CEEEEEECCCCCCEEEEEHHHHHCCHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHH
LESNGIIVTKRGIGTFIAIESETKCYSYNIDYSSMTNDYSNNLRNLDIIKDEFPYKKGLI
HCCCCEEEEECCCEEEEEEECCCEEEEEECCHHHHCCHHHCCCCCCEEECCCCCHHHCCE
SFKSIAPESNLFNLDDFKRALLDAWSYENTNLLNYGYAKGYKPLIDYFFDYMIKKRVNVD
EHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCC
SKDILITNGFTEAFDIVMSSLTTKGDTIICEKPTHNTAIKIMKSYGLNVVQINMDKDGLD
CCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCH
LIELEKGLSECKPKFGYLIPSYNNPTGIVTKSERRKEIYNLFRKYSVPIIEDGFNEELLY
HHHHHHHHHHCCCCCCEEEECCCCCCCEEECHHHHHHHHHHHHHCCCCEEECCCCCCEEE
SSSPIDPIASLAGEGNGIIYIGSLSKILFPGLRIGWIFADQKLIDILESVKRGKTIHSSF
CCCCCCHHHHHCCCCCCEEEECCCHHHHCCCCEEEEEECCHHHHHHHHHHHHCCHHHHHH
LDQSAFYYYLKSGSFNKYLKNVRKYYKDKYNLVIETINNHIPYEYITGEGGLHIFIKLKD
HCCCEEEEEEECCCHHHHHHHHHHHHCCHHEEEEEECCCCCCEEEEECCCCEEEEEEEEC
HINSRQLLELCYKDGVIFMPGDIFYEGNADETTFRIGFGRVTDNDIRIGIKIIGDNIKFL
CCCHHHHHHHHHHCCEEECCCCEEECCCCCCEEEEEEECCEECCCEEEEEEEECCCHHHH
SRKSKI
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]