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The map label for this gene is tsr [C]

Identifier: 187934153

GI number: 187934153

Start: 2775247

End: 2777283

Strand: Reverse

Name: tsr [C]

Synonym: CLL_A2657

Alternate gene names: 187934153

Gene position: 2777283-2775247 (Counterclockwise)

Preceding gene: 187935446

Following gene: 187933929

Centisome position: 73.08

GC content: 28.57

Gene sequence:

>2037_bases
ATGTTGAAAAAGTTTTCTTTTAGGACGAAATTATTAATTACGATTTTACCAGTTATAATAATTGGAATGTTGATTTTAAG
TTTTACAACATTCTATCAATTTAGAAAAAATATCGAAAATGAACTTATCAACAATAAATCAGAAGAGATAAATAAGTTAA
CAGAGAATATAAATACTTGGATGGATGGTAAGTTATTAGAAGTAAAGTCTTCTGCAAATACTCCTACAGCAAAATTAATA
GATAAAGATATACAAGCAGTAGATAACTTTAACGCAGAAAGGATTAAATTTCTAGAAGAAAATTATCCAGGAGAATATGA
TAATGCAGCAGCAACATTATTTAACAACGATGGTAAATCAAGAGCTCAGTATTCAAATGGTACTTTCGTAAATGGTGATG
TCTCAGAAAAACTTTGGTATAAGGATTTAATGAGTGGTGTACCTTATAATATTTCTAATCCAGTAATATCAAAAGGAACA
GGAAAAACATTAGTTGTAATTGGAGTTCCTATTAAAGGTGAAACTGATCAATCAATAGGAACAATGATATCAGCAGTAAA
TCTTTCTTACATACAAGAAAAAGTTAAAGACTTTAAATTTGGGAAAAATGGTTATAGTTTATTAGTTGGAAAAGATGGAA
CTATTCTTGAACATCCAGATGAAGAATTAATAATGAAAAAGAATATATCAGAGATTGAAGATGAGAACATAAAATTATTA
GGTGAAAAAATGCAAGGAAATGAGGAGGGAATCTTTAGATTTGGAACTGGAGATAATAAATTCATTGTATTTTATGATAA
AGTACCTTTATCAGATTGGAGTGTAGCTAGTGTCTTATCAGAAAAAGAATTATTTGCTTCAGTTGATAAATTGATGATTA
TGTCACTTTTAATAACAGCAGTTATTGTTTTAGTTAGTGCAATTATAATTGTTTTTGTGGCAAAACAAATGACTTCACCA
TTAGCTAGTTTATCAGATTTTTCAGAAGAAATATCTTTAGGTGATCTTACTAATAAGTTAGAAATTGATGGTGAAGATGA
AGTTGCTAAAGTAGCTAATGGACTAAATAATACGGTATTTAAACTTAAAGAAATGATAAGTGATATAAGTACTTCTGCTG
ATGAAGTTATGGTAGTATCAAATAGTTTATCACTAGCTACAAGTGAATCTTTAAAAGGAAATGAAGAAGTGTCTAAAAGT
ATGCAAGAGATAGCGGCAGGTGCTGTAACTCAAGCACAAGGAGCTAGTGAAGCATCTATTGTTACAGGAGAATTAATTGA
AGAGATAAATGAAGTATTTAAAAAGTGCAATCATATGATTAATATAGTTGAAAAATCAAGTGATATTAGCAATTCAGTAT
CAAAAGGTGTTAAAGAGGCAATAGATAGTATACAAAATATAGCTGAAACTAATAAATTAAATGTTCAAGAGACTCAAACT
TTATTAGAACAATCTAAGGAAATAGGACAAATCGTAGATGTAATAAGTGAAATATCAGAACAAACTAATCTTTTATCACT
TAATGCAGCAATTGAAGCTGCTAGAGCTGGTGAACAAGGAAAAGGATTTGCTATAGTTGCAGATGAAGTAAGACAATTAG
CAGAGCAATCAGCTAATTCTTCAAAAAAAATAGCTAATCTTATTAGTATGATTCAAAATCAAATTGAAATTATATCAAAT
AAGATGGAAACTGGAACATGCGAAGTTGTATCTGGTGTTAAAAAAGCAACATTAGTAGGTGAGAATTTCAAAGAAATAGA
AAGAGTTTTTACTACAGTAATTAATGTTGCAGATGAAGTGTCAAAAGCTACAAATAGAATGGAAAAGAAAGCTAGCACAA
CATCAGATATTATAAATAATGTTGCAGCAATAACTGAGGAAAATTCAGCAGCAACAGAACAAGTTACTGCATCAAATGAA
GAACAAATTGCATTTATGCATGAAATTGTAGATTCAACATATAAGTTAGAAGATTTAGTTAATAATCTTAATAATACAGT
AGAAAGATTTAAATTAGATAAAAAGAGTAATGAATAG

Upstream 100 bases:

>100_bases
TTTATTTTTATAAAGCTATTTATGGGATTTTTTATATTTAAAGTATTGATGATAACATTCGATATAATTAGCATATAAAC
TAATTTATAGGAGTGATAAT

Downstream 100 bases:

>100_bases
TATTAAACATTAGTATAATTTTTATGAATAAGTTATAGTATGTTATTTTATGTAAAAATAAAATAACATACTGTTTTTCA
TTATAACTTCTTATTTTAAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MLKKFSFRTKLLITILPVIIIGMLILSFTTFYQFRKNIENELINNKSEEINKLTENINTWMDGKLLEVKSSANTPTAKLI
DKDIQAVDNFNAERIKFLEENYPGEYDNAAATLFNNDGKSRAQYSNGTFVNGDVSEKLWYKDLMSGVPYNISNPVISKGT
GKTLVVIGVPIKGETDQSIGTMISAVNLSYIQEKVKDFKFGKNGYSLLVGKDGTILEHPDEELIMKKNISEIEDENIKLL
GEKMQGNEEGIFRFGTGDNKFIVFYDKVPLSDWSVASVLSEKELFASVDKLMIMSLLITAVIVLVSAIIIVFVAKQMTSP
LASLSDFSEEISLGDLTNKLEIDGEDEVAKVANGLNNTVFKLKEMISDISTSADEVMVVSNSLSLATSESLKGNEEVSKS
MQEIAAGAVTQAQGASEASIVTGELIEEINEVFKKCNHMINIVEKSSDISNSVSKGVKEAIDSIQNIAETNKLNVQETQT
LLEQSKEIGQIVDVISEISEQTNLLSLNAAIEAARAGEQGKGFAIVADEVRQLAEQSANSSKKIANLISMIQNQIEIISN
KMETGTCEVVSGVKKATLVGENFKEIERVFTTVINVADEVSKATNRMEKKASTTSDIINNVAAITEENSAATEQVTASNE
EQIAFMHEIVDSTYKLEDLVNNLNNTVERFKLDKKSNE

Sequences:

>Translated_678_residues
MLKKFSFRTKLLITILPVIIIGMLILSFTTFYQFRKNIENELINNKSEEINKLTENINTWMDGKLLEVKSSANTPTAKLI
DKDIQAVDNFNAERIKFLEENYPGEYDNAAATLFNNDGKSRAQYSNGTFVNGDVSEKLWYKDLMSGVPYNISNPVISKGT
GKTLVVIGVPIKGETDQSIGTMISAVNLSYIQEKVKDFKFGKNGYSLLVGKDGTILEHPDEELIMKKNISEIEDENIKLL
GEKMQGNEEGIFRFGTGDNKFIVFYDKVPLSDWSVASVLSEKELFASVDKLMIMSLLITAVIVLVSAIIIVFVAKQMTSP
LASLSDFSEEISLGDLTNKLEIDGEDEVAKVANGLNNTVFKLKEMISDISTSADEVMVVSNSLSLATSESLKGNEEVSKS
MQEIAAGAVTQAQGASEASIVTGELIEEINEVFKKCNHMINIVEKSSDISNSVSKGVKEAIDSIQNIAETNKLNVQETQT
LLEQSKEIGQIVDVISEISEQTNLLSLNAAIEAARAGEQGKGFAIVADEVRQLAEQSANSSKKIANLISMIQNQIEIISN
KMETGTCEVVSGVKKATLVGENFKEIERVFTTVINVADEVSKATNRMEKKASTTSDIINNVAAITEENSAATEQVTASNE
EQIAFMHEIVDSTYKLEDLVNNLNNTVERFKLDKKSNE
>Mature_678_residues
MLKKFSFRTKLLITILPVIIIGMLILSFTTFYQFRKNIENELINNKSEEINKLTENINTWMDGKLLEVKSSANTPTAKLI
DKDIQAVDNFNAERIKFLEENYPGEYDNAAATLFNNDGKSRAQYSNGTFVNGDVSEKLWYKDLMSGVPYNISNPVISKGT
GKTLVVIGVPIKGETDQSIGTMISAVNLSYIQEKVKDFKFGKNGYSLLVGKDGTILEHPDEELIMKKNISEIEDENIKLL
GEKMQGNEEGIFRFGTGDNKFIVFYDKVPLSDWSVASVLSEKELFASVDKLMIMSLLITAVIVLVSAIIIVFVAKQMTSP
LASLSDFSEEISLGDLTNKLEIDGEDEVAKVANGLNNTVFKLKEMISDISTSADEVMVVSNSLSLATSESLKGNEEVSKS
MQEIAAGAVTQAQGASEASIVTGELIEEINEVFKKCNHMINIVEKSSDISNSVSKGVKEAIDSIQNIAETNKLNVQETQT
LLEQSKEIGQIVDVISEISEQTNLLSLNAAIEAARAGEQGKGFAIVADEVRQLAEQSANSSKKIANLISMIQNQIEIISN
KMETGTCEVVSGVKKATLVGENFKEIERVFTTVINVADEVSKATNRMEKKASTTSDIINNVAAITEENSAATEQVTASNE
EQIAFMHEIVDSTYKLEDLVNNLNNTVERFKLDKKSNE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=345, Percent_Identity=28.4057971014493, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1787690, Length=486, Percent_Identity=25.9259259259259, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI1788195, Length=325, Percent_Identity=28.3076923076923, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI1788194, Length=348, Percent_Identity=27.2988505747126, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1789453, Length=387, Percent_Identity=21.9638242894057, Blast_Score=94, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 74510; Mature: 74510

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKFSFRTKLLITILPVIIIGMLILSFTTFYQFRKNIENELINNKSEEINKLTENINTW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MDGKLLEVKSSANTPTAKLIDKDIQAVDNFNAERIKFLEENYPGEYDNAAATLFNNDGKS
CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCC
RAQYSNGTFVNGDVSEKLWYKDLMSGVPYNISNPVISKGTGKTLVVIGVPIKGETDQSIG
HHCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHH
TMISAVNLSYIQEKVKDFKFGKNGYSLLVGKDGTILEHPDEELIMKKNISEIEDENIKLL
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHCCHHHHCCCCHHHH
GEKMQGNEEGIFRFGTGDNKFIVFYDKVPLSDWSVASVLSEKELFASVDKLMIMSLLITA
HHHHCCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIVLVSAIIIVFVAKQMTSPLASLSDFSEEISLGDLTNKLEIDGEDEVAKVANGLNNTVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEECCCCHHHHHHHCCCCHHHH
KLKEMISDISTSADEVMVVSNSLSLATSESLKGNEEVSKSMQEIAAGAVTQAQGASEASI
HHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
VTGELIEEINEVFKKCNHMINIVEKSSDISNSVSKGVKEAIDSIQNIAETNKLNVQETQT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LLEQSKEIGQIVDVISEISEQTNLLSLNAAIEAARAGEQGKGFAIVADEVRQLAEQSANS
HHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCC
SKKIANLISMIQNQIEIISNKMETGTCEVVSGVKKATLVGENFKEIERVFTTVINVADEV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SKATNRMEKKASTTSDIINNVAAITEENSAATEQVTASNEEQIAFMHEIVDSTYKLEDLV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
NNLNNTVERFKLDKKSNE
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLKKFSFRTKLLITILPVIIIGMLILSFTTFYQFRKNIENELINNKSEEINKLTENINTW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MDGKLLEVKSSANTPTAKLIDKDIQAVDNFNAERIKFLEENYPGEYDNAAATLFNNDGKS
CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCC
RAQYSNGTFVNGDVSEKLWYKDLMSGVPYNISNPVISKGTGKTLVVIGVPIKGETDQSIG
HHCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHH
TMISAVNLSYIQEKVKDFKFGKNGYSLLVGKDGTILEHPDEELIMKKNISEIEDENIKLL
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHCCHHHHCCCCHHHH
GEKMQGNEEGIFRFGTGDNKFIVFYDKVPLSDWSVASVLSEKELFASVDKLMIMSLLITA
HHHHCCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIVLVSAIIIVFVAKQMTSPLASLSDFSEEISLGDLTNKLEIDGEDEVAKVANGLNNTVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEECCCCHHHHHHHCCCCHHHH
KLKEMISDISTSADEVMVVSNSLSLATSESLKGNEEVSKSMQEIAAGAVTQAQGASEASI
HHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
VTGELIEEINEVFKKCNHMINIVEKSSDISNSVSKGVKEAIDSIQNIAETNKLNVQETQT
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LLEQSKEIGQIVDVISEISEQTNLLSLNAAIEAARAGEQGKGFAIVADEVRQLAEQSANS
HHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCC
SKKIANLISMIQNQIEIISNKMETGTCEVVSGVKKATLVGENFKEIERVFTTVINVADEV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SKATNRMEKKASTTSDIINNVAAITEENSAATEQVTASNEEQIAFMHEIVDSTYKLEDLV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
NNLNNTVERFKLDKKSNE
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA