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The map label for this gene is ugpB [H]

Identifier: 187933864

GI number: 187933864

Start: 3316948

End: 3318270

Strand: Reverse

Name: ugpB [H]

Synonym: CLL_A3192

Alternate gene names: 187933864

Gene position: 3318270-3316948 (Counterclockwise)

Preceding gene: 187933103

Following gene: 187935088

Centisome position: 87.32

GC content: 31.59

Gene sequence:

>1323_bases
ATGAAGAGGATTTTTAAAAAGGGTTTTGCAATTGGGTTAGCGTTAATGATTTCTGTAGGGCTAATTTCATGCAATACGGG
AAAAAGTAAAGAAACTTTCAGTAGTAATGGAAAAATTAAGGTTGAATATTGGTATGGTCTGGGAGGAAAGCTTGGAAAAA
ATATGGACAATATAATAAATGATTTTAATAACTCTCAAGATAAGTATGAAGTTAAAGGAATTTCACAGGAAGATTATGAT
GCAACTTTTAAAAATTTGCAAGCAGCTATTGCAGCTAAAAAGACACCAACGCTTGTGGTTTTGGAACCAGATAAAGGTGC
TATATTAAATAATAAAGGTGCACTTGCAGATATAAGTAATTATACAGCAGAAGATAGTGATTTTAATAGCGATAATTACA
TAAAATCATTTTTTGAGTCATGTAAAAAAGATAATAAACTATATGCATTTCCTATGTTTGGAACAACACAAGTTTTATAT
TATAACAAGAAGGAACTTGAAAATGCAGGGATATCTAAAGATTCATTAAATACGTGGAGTAAAATAGCTGAAGCAAGTAA
AAAATTAATCAAAAAAGATGGTGATGAGACTAAGTTTTATGGTTGGGAACCTATGTGGGGAGCTGATAATTTAATTGATG
CTTCATTAAGTAATGGTGGAAGTATTTTAAGTGAAGATGGTAGTAGAGTATTAATAAATTCACCTGAATGGGTAGAAGTT
TGGGATAATTTTAGACTGTGGATACATGATGATAAAATCATGAAAGTTAATTCAAGTGGACAAGGATGGGAATACTGGTA
TTCAACAATTGATGATGTTATGCAAGATAGAGCAGGGGGATATACAGGATCATCAGGAGATCAAGGAGATTTAGATTTTG
AAAAGTTAGGGGCTATTGAACAACCTGCATTTAAAGATGGTAAAGAAGCAAAACCAATTGCGGAAGCAAGACTTTTAGTG
ATACCAAATTTAGCAAATGAAGAAGCAAAAAAAGGAGCTTATGAATTCATTAAATATTTTACAAGTCCAGAAGTTAATGC
AAAATGGTCAATAGCTTCAGGTTATATTCCTGTTAATAAAGCGGCATGTAATACTGATGCATTTAAGGAATATGTGGAAA
AAAATCCGCAAGCACTTGTTCCAATAACACAAGCGTTACATGCAAGTAAATCATTTATTGATCCCACTAATGGAAAAATA
TATGATGCTTTAAAAGTTGCGGCAGATAAGGTTGAATTGGAAAATGTATCAGCACAAGAAGCTTTAGATGAAGCAGAAAA
AATAGCACAATCAGAATTAGATAAAACTTTAAAAAAGCAATAA

Upstream 100 bases:

>100_bases
TTTAGGATGAACATATTGTATTGAACAGTGAACAATGTTAGTATATAGATGTTCAATAAATGAACTAAAAAATAAGGGTA
TTAATGAGGGGGATAAGTAA

Downstream 100 bases:

>100_bases
AACTTTAACTTATGTTTTAAATATGTGTTGATATATGCATAGGTAAAGGTGGGCTGAGTAATTGAACTTAGGAATACTAA
AATAACTATAGTCCCATTTT

Product: glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MKRIFKKGFAIGLALMISVGLISCNTGKSKETFSSNGKIKVEYWYGLGGKLGKNMDNIINDFNNSQDKYEVKGISQEDYD
ATFKNLQAAIAAKKTPTLVVLEPDKGAILNNKGALADISNYTAEDSDFNSDNYIKSFFESCKKDNKLYAFPMFGTTQVLY
YNKKELENAGISKDSLNTWSKIAEASKKLIKKDGDETKFYGWEPMWGADNLIDASLSNGGSILSEDGSRVLINSPEWVEV
WDNFRLWIHDDKIMKVNSSGQGWEYWYSTIDDVMQDRAGGYTGSSGDQGDLDFEKLGAIEQPAFKDGKEAKPIAEARLLV
IPNLANEEAKKGAYEFIKYFTSPEVNAKWSIASGYIPVNKAACNTDAFKEYVEKNPQALVPITQALHASKSFIDPTNGKI
YDALKVAADKVELENVSAQEALDEAEKIAQSELDKTLKKQ

Sequences:

>Translated_440_residues
MKRIFKKGFAIGLALMISVGLISCNTGKSKETFSSNGKIKVEYWYGLGGKLGKNMDNIINDFNNSQDKYEVKGISQEDYD
ATFKNLQAAIAAKKTPTLVVLEPDKGAILNNKGALADISNYTAEDSDFNSDNYIKSFFESCKKDNKLYAFPMFGTTQVLY
YNKKELENAGISKDSLNTWSKIAEASKKLIKKDGDETKFYGWEPMWGADNLIDASLSNGGSILSEDGSRVLINSPEWVEV
WDNFRLWIHDDKIMKVNSSGQGWEYWYSTIDDVMQDRAGGYTGSSGDQGDLDFEKLGAIEQPAFKDGKEAKPIAEARLLV
IPNLANEEAKKGAYEFIKYFTSPEVNAKWSIASGYIPVNKAACNTDAFKEYVEKNPQALVPITQALHASKSFIDPTNGKI
YDALKVAADKVELENVSAQEALDEAEKIAQSELDKTLKKQ
>Mature_440_residues
MKRIFKKGFAIGLALMISVGLISCNTGKSKETFSSNGKIKVEYWYGLGGKLGKNMDNIINDFNNSQDKYEVKGISQEDYD
ATFKNLQAAIAAKKTPTLVVLEPDKGAILNNKGALADISNYTAEDSDFNSDNYIKSFFESCKKDNKLYAFPMFGTTQVLY
YNKKELENAGISKDSLNTWSKIAEASKKLIKKDGDETKFYGWEPMWGADNLIDASLSNGGSILSEDGSRVLINSPEWVEV
WDNFRLWIHDDKIMKVNSSGQGWEYWYSTIDDVMQDRAGGYTGSSGDQGDLDFEKLGAIEQPAFKDGKEAKPIAEARLLV
IPNLANEEAKKGAYEFIKYFTSPEVNAKWSIASGYIPVNKAACNTDAFKEYVEKNPQALVPITQALHASKSFIDPTNGKI
YDALKVAADKVELENVSAQEALDEAEKIAQSELDKTLKKQ

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=416, Percent_Identity=25.7211538461538, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48871; Mature: 48871

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIFKKGFAIGLALMISVGLISCNTGKSKETFSSNGKIKVEYWYGLGGKLGKNMDNIIN
CCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCCCEEEEEEECCCCHHCCCHHHHHH
DFNNSQDKYEVKGISQEDYDATFKNLQAAIAAKKTPTLVVLEPDKGAILNNKGALADISN
HCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCEEECCC
YTAEDSDFNSDNYIKSFFESCKKDNKLYAFPMFGTTQVLYYNKKELENAGISKDSLNTWS
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECHHHHHHCCCCCCHHHHHH
KIAEASKKLIKKDGDETKFYGWEPMWGADNLIDASLSNGGSILSEDGSRVLINSPEWVEV
HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEECCCCCCCCEEECCCCEEEECCCCCEEE
WDNFRLWIHDDKIMKVNSSGQGWEYWYSTIDDVMQDRAGGYTGSSGDQGDLDFEKLGAIE
CCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCC
QPAFKDGKEAKPIAEARLLVIPNLANEEAKKGAYEFIKYFTSPEVNAKWSIASGYIPVNK
CCCCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCEECCC
AACNTDAFKEYVEKNPQALVPITQALHASKSFIDPTNGKIYDALKVAADKVELENVSAQE
CCCCHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH
ALDEAEKIAQSELDKTLKKQ
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRIFKKGFAIGLALMISVGLISCNTGKSKETFSSNGKIKVEYWYGLGGKLGKNMDNIIN
CCHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCCCEEEEEEECCCCHHCCCHHHHHH
DFNNSQDKYEVKGISQEDYDATFKNLQAAIAAKKTPTLVVLEPDKGAILNNKGALADISN
HCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCEEECCC
YTAEDSDFNSDNYIKSFFESCKKDNKLYAFPMFGTTQVLYYNKKELENAGISKDSLNTWS
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECHHHHHHCCCCCCHHHHHH
KIAEASKKLIKKDGDETKFYGWEPMWGADNLIDASLSNGGSILSEDGSRVLINSPEWVEV
HHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEECCCCCCCCEEECCCCEEEECCCCCEEE
WDNFRLWIHDDKIMKVNSSGQGWEYWYSTIDDVMQDRAGGYTGSSGDQGDLDFEKLGAIE
CCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCC
QPAFKDGKEAKPIAEARLLVIPNLANEEAKKGAYEFIKYFTSPEVNAKWSIASGYIPVNK
CCCCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCEECCC
AACNTDAFKEYVEKNPQALVPITQALHASKSFIDPTNGKIYDALKVAADKVELENVSAQE
CCCCHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH
ALDEAEKIAQSELDKTLKKQ
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]