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The map label for this gene is yurN [H]

Identifier: 187935088

GI number: 187935088

Start: 3315543

End: 3316439

Strand: Reverse

Name: yurN [H]

Synonym: CLL_A3191

Alternate gene names: 187935088

Gene position: 3316439-3315543 (Counterclockwise)

Preceding gene: 187933864

Following gene: 187934080

Centisome position: 87.27

GC content: 27.65

Gene sequence:

>897_bases
GTGAGAATTATGAAAAAGTCTAATATTAAAAAGTTCGATCAAATTTTTACTATACTTATGTTTGTATTGCCAGCTATTAT
TCCACTTATAGTATTTTGGATAGTTCCAATTTTCAAATCATTATTTATAAGTTTTACAGATTGGGATTATATAAGTGCTG
AATACAGTATTGTAGGTTTAAAAAATTATAGGGAGTTATTTTCTAATAAATTATTTTATGATGCATTAAAAAATACAAGT
ATATTTACATTAGGAACATTACTTCCAACAATAGCTGGTGGATTAAGTTTAGCATTATTGTTAAGATCAAATTTTAAATC
TTCAGCAATATATAAAGCTATAATATTTTCTCCATGGATAACTCCTACAGTTGCAATTTCTATTGTATGGAGTTGGATAT
TTGAACCTAATTATGGATTTGCAAATTATATATTAAATCTATGTAATTTACCTAAATTACAATGGTTGCAAAGTTCGAAT
ACCGCTATGGGTGGGGTAATTATTGTTACAGTTTGGAAAAGTATAGGATGGGCTATGATTTTTTATTTAACTGCACTAGA
GAAAATACCTAAAGATTTATATGAATCAGCTTCAATTGATGGGGCTGATTCATTAAATAAATTTAAAAGTATAACATTAC
CTTTAATTTCACCGACTACATTTTTTCTATGTGTAATAACAATGATAAATTCTTTACAGGCATATGATCAAATTCAAGTG
TTGACTCAGGGGGGACCATCTGGAAGCACTAGAACATTATTATATATGTATTATCAATGTGCATTTGAAAATTTTAATAT
GGGAGAAGCCACTGCAATAGCAACAGTGATTTTGGTTATAACTTGCATACTTTCATTAATTCAATTTGTTGTTTCAAAAA
GGTGGGTACATTATTAG

Upstream 100 bases:

>100_bases
TAGTAGAGGATTTATACTTACCTACTAAAACAGAGACTTATTGTTAAAAATAGATGGAAATATATTTAATAGAGGCCTAA
ATTTTATTTGAGGGGTTATG

Downstream 100 bases:

>100_bases
TTACTTTATTTTAAGATGGGAAATCATAGAGTTTTATAAGCTTGAAAAATAGGTAGGGCCTAGGAGTGAGTAAATATTAG
TTGAGAAGTGAGAGTGAAGA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MRIMKKSNIKKFDQIFTILMFVLPAIIPLIVFWIVPIFKSLFISFTDWDYISAEYSIVGLKNYRELFSNKLFYDALKNTS
IFTLGTLLPTIAGGLSLALLLRSNFKSSAIYKAIIFSPWITPTVAISIVWSWIFEPNYGFANYILNLCNLPKLQWLQSSN
TAMGGVIIVTVWKSIGWAMIFYLTALEKIPKDLYESASIDGADSLNKFKSITLPLISPTTFFLCVITMINSLQAYDQIQV
LTQGGPSGSTRTLLYMYYQCAFENFNMGEATAIATVILVITCILSLIQFVVSKRWVHY

Sequences:

>Translated_298_residues
MRIMKKSNIKKFDQIFTILMFVLPAIIPLIVFWIVPIFKSLFISFTDWDYISAEYSIVGLKNYRELFSNKLFYDALKNTS
IFTLGTLLPTIAGGLSLALLLRSNFKSSAIYKAIIFSPWITPTVAISIVWSWIFEPNYGFANYILNLCNLPKLQWLQSSN
TAMGGVIIVTVWKSIGWAMIFYLTALEKIPKDLYESASIDGADSLNKFKSITLPLISPTTFFLCVITMINSLQAYDQIQV
LTQGGPSGSTRTLLYMYYQCAFENFNMGEATAIATVILVITCILSLIQFVVSKRWVHY
>Mature_298_residues
MRIMKKSNIKKFDQIFTILMFVLPAIIPLIVFWIVPIFKSLFISFTDWDYISAEYSIVGLKNYRELFSNKLFYDALKNTS
IFTLGTLLPTIAGGLSLALLLRSNFKSSAIYKAIIFSPWITPTVAISIVWSWIFEPNYGFANYILNLCNLPKLQWLQSSN
TAMGGVIIVTVWKSIGWAMIFYLTALEKIPKDLYESASIDGADSLNKFKSITLPLISPTTFFLCVITMINSLQAYDQIQV
LTQGGPSGSTRTLLYMYYQCAFENFNMGEATAIATVILVITCILSLIQFVVSKRWVHY

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=280, Percent_Identity=28.2142857142857, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1790465, Length=262, Percent_Identity=28.6259541984733, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787570, Length=231, Percent_Identity=25.974025974026, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33782; Mature: 33782

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIMKKSNIKKFDQIFTILMFVLPAIIPLIVFWIVPIFKSLFISFTDWDYISAEYSIVGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEH
KNYRELFSNKLFYDALKNTSIFTLGTLLPTIAGGLSLALLLRSNFKSSAIYKAIIFSPWI
HHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
TPTVAISIVWSWIFEPNYGFANYILNLCNLPKLQWLQSSNTAMGGVIIVTVWKSIGWAMI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
FYLTALEKIPKDLYESASIDGADSLNKFKSITLPLISPTTFFLCVITMINSLQAYDQIQV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LTQGGPSGSTRTLLYMYYQCAFENFNMGEATAIATVILVITCILSLIQFVVSKRWVHY
EECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRIMKKSNIKKFDQIFTILMFVLPAIIPLIVFWIVPIFKSLFISFTDWDYISAEYSIVGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEH
KNYRELFSNKLFYDALKNTSIFTLGTLLPTIAGGLSLALLLRSNFKSSAIYKAIIFSPWI
HHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
TPTVAISIVWSWIFEPNYGFANYILNLCNLPKLQWLQSSNTAMGGVIIVTVWKSIGWAMI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
FYLTALEKIPKDLYESASIDGADSLNKFKSITLPLISPTTFFLCVITMINSLQAYDQIQV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LTQGGPSGSTRTLLYMYYQCAFENFNMGEATAIATVILVITCILSLIQFVVSKRWVHY
EECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]