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The map label for this gene is rsmI [H]

Identifier: 187933851

GI number: 187933851

Start: 3558262

End: 3559107

Strand: Reverse

Name: rsmI [H]

Synonym: CLL_A3374

Alternate gene names: 187933851

Gene position: 3559107-3558262 (Counterclockwise)

Preceding gene: 187934189

Following gene: 187933114

Centisome position: 93.65

GC content: 29.08

Gene sequence:

>846_bases
ATGGAAGTAGGAAAGTTATATTTAGTACCAACCCCAATAGGTAATTTAAAAGATATAACATTAAGAGCTTTGGAAGTACT
AAATGAAGCGGATATTATAGCGGCAGAAGACACTAGACAGACTTTAAAATTATTAAATCATTTTGAGATAAAGAAAACAT
TAATAAGTTATCATAAATTTAATGAGAAAGATAAGAGTAATGAAATTATTGATAGACTTTTAAATGGGCAAAGCATAGCA
TTGGTATCTGATGCAGGAACTCCTGGTATATCTGATCCTGGAAGTGTTATAGTTAAAAGATGTATAGAAGAAGGAATTTC
ATTTAATGTTTTACCAGGTGCAACAGCTATAACAACAGCTTTGGTATACTCAGGGTTAGATACAACAAAATTTATTTTTA
GAGGTTTTTTACCTAGAGAAAACAAAGATAGAAATATAATAAAGGAAGAATTACTTCAAAGCCAAGAAACTTTAATATTC
TATGAAGCACCACATAGATTGCTTGATACATTATCTTTTCTATATAATTCATTTGGAAATAGACAAATTGCAGTTTGTAG
AGAGCTGACAAAACTATATGAACAAATATTCAGAGGTACTATTGAAGAATCCATTAATTATTTCATAGAGAATAAACCTA
GAGGCGAGTTTGTACTTGTACTTGAAGGTAAAAGACTTGAAGAAATAAAACAAGAAAGAGAAAGTGAATGGATTGATTTG
TCAATTCAAGATCACATAATGAAATATATAGATGAAGGTATAAGTAAGAAAGAAGCTATTAAAACTGTTGCTAAAGATAG
GGGTATACCCAAAAGCGAAGTTTATAAGTTTTCAATTGATATATAA

Upstream 100 bases:

>100_bases
GACGGCGGTTCATATTTGAAATGGGATATTCCTTTATATGTTCACAATGAGGATGGATCTTATACAAAGCAAATAGATAA
AATATATGGGAGGATATAAA

Downstream 100 bases:

>100_bases
ATATAAGGCTGTGTTTTAGTAGAGTGTTGATATATGCAATAGGTAAAGTGGCATTGTAATTGGACTTTGAGAATTCTTAA
TGAGTATTGTCATATTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MEVGKLYLVPTPIGNLKDITLRALEVLNEADIIAAEDTRQTLKLLNHFEIKKTLISYHKFNEKDKSNEIIDRLLNGQSIA
LVSDAGTPGISDPGSVIVKRCIEEGISFNVLPGATAITTALVYSGLDTTKFIFRGFLPRENKDRNIIKEELLQSQETLIF
YEAPHRLLDTLSFLYNSFGNRQIAVCRELTKLYEQIFRGTIEESINYFIENKPRGEFVLVLEGKRLEEIKQERESEWIDL
SIQDHIMKYIDEGISKKEAIKTVAKDRGIPKSEVYKFSIDI

Sequences:

>Translated_281_residues
MEVGKLYLVPTPIGNLKDITLRALEVLNEADIIAAEDTRQTLKLLNHFEIKKTLISYHKFNEKDKSNEIIDRLLNGQSIA
LVSDAGTPGISDPGSVIVKRCIEEGISFNVLPGATAITTALVYSGLDTTKFIFRGFLPRENKDRNIIKEELLQSQETLIF
YEAPHRLLDTLSFLYNSFGNRQIAVCRELTKLYEQIFRGTIEESINYFIENKPRGEFVLVLEGKRLEEIKQERESEWIDL
SIQDHIMKYIDEGISKKEAIKTVAKDRGIPKSEVYKFSIDI
>Mature_281_residues
MEVGKLYLVPTPIGNLKDITLRALEVLNEADIIAAEDTRQTLKLLNHFEIKKTLISYHKFNEKDKSNEIIDRLLNGQSIA
LVSDAGTPGISDPGSVIVKRCIEEGISFNVLPGATAITTALVYSGLDTTKFIFRGFLPRENKDRNIIKEELLQSQETLIF
YEAPHRLLDTLSFLYNSFGNRQIAVCRELTKLYEQIFRGTIEESINYFIENKPRGEFVLVLEGKRLEEIKQERESEWIDL
SIQDHIMKYIDEGISKKEAIKTVAKDRGIPKSEVYKFSIDI

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=228, Percent_Identity=47.3684210526316, Blast_Score=203, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32100; Mature: 32100

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVGKLYLVPTPIGNLKDITLRALEVLNEADIIAAEDTRQTLKLLNHFEIKKTLISYHKF
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHC
NEKDKSNEIIDRLLNGQSIALVSDAGTPGISDPGSVIVKRCIEEGISFNVLPGATAITTA
CCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHH
LVYSGLDTTKFIFRGFLPRENKDRNIIKEELLQSQETLIFYEAPHRLLDTLSFLYNSFGN
HHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCC
RQIAVCRELTKLYEQIFRGTIEESINYFIENKPRGEFVLVLEGKRLEEIKQERESEWIDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCEEEE
SIQDHIMKYIDEGISKKEAIKTVAKDRGIPKSEVYKFSIDI
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHEEEEEECC
>Mature Secondary Structure
MEVGKLYLVPTPIGNLKDITLRALEVLNEADIIAAEDTRQTLKLLNHFEIKKTLISYHKF
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHC
NEKDKSNEIIDRLLNGQSIALVSDAGTPGISDPGSVIVKRCIEEGISFNVLPGATAITTA
CCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHH
LVYSGLDTTKFIFRGFLPRENKDRNIIKEELLQSQETLIFYEAPHRLLDTLSFLYNSFGN
HHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCC
RQIAVCRELTKLYEQIFRGTIEESINYFIENKPRGEFVLVLEGKRLEEIKQERESEWIDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCEEEE
SIQDHIMKYIDEGISKKEAIKTVAKDRGIPKSEVYKFSIDI
CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]