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The map label for this gene is yabB [H]

Identifier: 187934189

GI number: 187934189

Start: 3559109

End: 3559861

Strand: Reverse

Name: yabB [H]

Synonym: CLL_A3375

Alternate gene names: 187934189

Gene position: 3559861-3559109 (Counterclockwise)

Preceding gene: 187935163

Following gene: 187933851

Centisome position: 93.67

GC content: 28.02

Gene sequence:

>753_bases
ATGCTTGAAAATAATTTGATTAATTTAGATACAGATGAAGTTATAGATGATCTACAATTAAAAGGTCTACAATTAATACA
AAAGGTTAATGGATTTAAATTTGGTGTAGATGCTGTAATATTATCTGATTTTGCAAATGTTAAGAATAAATATAGAGTTA
TTGATTTATGTACAGGTACAGGAATAATACCATTTTTATTGTATGGAAAGTATAACCCAAAAGAGGTTTATGGACTAGAG
ATACAAGAAGAAATGGTTAATATGGCAGAGAAAAGTGTAAAATTAAATGCGTTAGAAGATAAGATTACATTTATAAAGGA
AGATTTAAAAAATATAGAGTATTTAAAGAAAATGGATAAGTTTGATGTAGTTACTGTAAACCCACCATACAAGTTGAATA
ATGCAGGAATTATAAATCCTAGTGATAAACTTGCTATTGCAAGGCATGAAGTTTTATGTAATTTAGAAGATGTGATTTAT
GCATCTAAAGTATTACTAAAAGATAATGGTAGAATGTTTATAGTACATAGACCAGAGAGATTAGCAGATATATTTACTTT
AATGAGAAAATATAAAATAGAGCCCAAAAGAGTTAAAATGGTATATCCTAAACCTGGTAAGGCAGCAAATATAGTATTAG
TAGAGGGGCAAAGAGACGGCGGTTCATATTTGAAATGGGATATTCCTTTATATGTTCACAATGAGGATGGATCTTATACA
AAGCAAATAGATAAAATATATGGGAGGATATAA

Upstream 100 bases:

>100_bases
AAGCATAACTATAAAATAAATTACTAAAATCATATTAAGTTGTTTAGAATATATGTATAAGTTATAATTATTTAGAATAT
ATGGATAAAGGAAGATAACT

Downstream 100 bases:

>100_bases
AATGGAAGTAGGAAAGTTATATTTAGTACCAACCCCAATAGGTAATTTAAAAGATATAACATTAAGAGCTTTGGAAGTAC
TAAATGAAGCGGATATTATA

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MLENNLINLDTDEVIDDLQLKGLQLIQKVNGFKFGVDAVILSDFANVKNKYRVIDLCTGTGIIPFLLYGKYNPKEVYGLE
IQEEMVNMAEKSVKLNALEDKITFIKEDLKNIEYLKKMDKFDVVTVNPPYKLNNAGIINPSDKLAIARHEVLCNLEDVIY
ASKVLLKDNGRMFIVHRPERLADIFTLMRKYKIEPKRVKMVYPKPGKAANIVLVEGQRDGGSYLKWDIPLYVHNEDGSYT
KQIDKIYGRI

Sequences:

>Translated_250_residues
MLENNLINLDTDEVIDDLQLKGLQLIQKVNGFKFGVDAVILSDFANVKNKYRVIDLCTGTGIIPFLLYGKYNPKEVYGLE
IQEEMVNMAEKSVKLNALEDKITFIKEDLKNIEYLKKMDKFDVVTVNPPYKLNNAGIINPSDKLAIARHEVLCNLEDVIY
ASKVLLKDNGRMFIVHRPERLADIFTLMRKYKIEPKRVKMVYPKPGKAANIVLVEGQRDGGSYLKWDIPLYVHNEDGSYT
KQIDKIYGRI
>Mature_250_residues
MLENNLINLDTDEVIDDLQLKGLQLIQKVNGFKFGVDAVILSDFANVKNKYRVIDLCTGTGIIPFLLYGKYNPKEVYGLE
IQEEMVNMAEKSVKLNALEDKITFIKEDLKNIEYLKKMDKFDVVTVNPPYKLNNAGIINPSDKLAIARHEVLCNLEDVIY
ASKVLLKDNGRMFIVHRPERLADIFTLMRKYKIEPKRVKMVYPKPGKAANIVLVEGQRDGGSYLKWDIPLYVHNEDGSYT
KQIDKIYGRI

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 28688; Mature: 28688

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENNLINLDTDEVIDDLQLKGLQLIQKVNGFKFGVDAVILSDFANVKNKYRVIDLCTGT
CCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCCCEEEEEEECCC
GIIPFLLYGKYNPKEVYGLEIQEEMVNMAEKSVKLNALEDKITFIKEDLKNIEYLKKMDK
CHHHHEEECCCCCCEEECCCHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
FDVVTVNPPYKLNNAGIINPSDKLAIARHEVLCNLEDVIYASKVLLKDNGRMFIVHRPER
CCEEECCCCEEECCCCEECCCCCEEHHHHHHHHCHHHHHHHEEEEEECCCCEEEEECCHH
LADIFTLMRKYKIEPKRVKMVYPKPGKAANIVLVEGQRDGGSYLKWDIPLYVHNEDGSYT
HHHHHHHHHHHCCCCHHEEEEECCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCHH
KQIDKIYGRI
HHHHHHHCCC
>Mature Secondary Structure
MLENNLINLDTDEVIDDLQLKGLQLIQKVNGFKFGVDAVILSDFANVKNKYRVIDLCTGT
CCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCCCEEEEEEECCC
GIIPFLLYGKYNPKEVYGLEIQEEMVNMAEKSVKLNALEDKITFIKEDLKNIEYLKKMDK
CHHHHEEECCCCCCEEECCCHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
FDVVTVNPPYKLNNAGIINPSDKLAIARHEVLCNLEDVIYASKVLLKDNGRMFIVHRPER
CCEEECCCCEEECCCCEECCCCCEEHHHHHHHHCHHHHHHHEEEEEECCCCEEEEECCHH
LADIFTLMRKYKIEPKRVKMVYPKPGKAANIVLVEGQRDGGSYLKWDIPLYVHNEDGSYT
HHHHHHHHHHHCCCCHHEEEEECCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCHH
KQIDKIYGRI
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]