| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933685
Identifier: 187933685
GI number: 187933685
Start: 3464895
End: 3465914
Strand: Reverse
Name: 187933685
Synonym: CLL_A3296
Alternate gene names: NA
Gene position: 3465914-3464895 (Counterclockwise)
Preceding gene: 187934709
Following gene: 187935383
Centisome position: 91.2
GC content: 22.94
Gene sequence:
>1020_bases ATGAAATATATTTGTAAAATATTAAAAATACCTATGTTAAAAATAAGTAATAAAAATAAGGGATTTACATTAATTGAAAT AATAATAGCATTTGCGCTTTTTGCAATAATGATGGTTGGAATATATGGAATTGTAATTTCAGCTATGAATACTAATAAAG CTGGAGAAGTAAAACAGAAAGCTGCATTGTATGGACAACTGATATTTGAGGATATTAAAAGTGGAGATATAAGAAAAGAT GAGACGGGAAAAATTAAGATATCTAATGAAATAATATTAGAGGAAAATAGAAGTGATTCAAAATACAGTTGGAATGGATA TTTAGACAAGAATAATAACTATTATGCTGAAATTGAAATGAATAAAAATACGTCAATAACACTTAATAATTCTAAAAAAG AAGGTAATAGTTCTGATGAAGGAGAATCAGAAAAGAAAATATCTAGAACATTTGATTTTAATATAGCTTTAAGTGGTGAC AATAGTGATAGTGATTATATAAGAGTTAAAGCAGATACTAACGAAAATGGAAAATTAAAATATGATATTAATTCAGATAA AAATTTAAAGTTGATTGTTAATATAATGAAAAAATCAAATAAAAAAATAGTGATTATAAAAGACAGTAATAATAAAGAAA TATTAACTACTAAAAGTGATATAAAAAAAGATGAAGACAAAGACAATGAAATACGGTTAAATTTTAATTTTGCTGAATAT AAAGTTAAAAGCAATTTAGATAATAACAAATATAGAAAAATAGAAATAGATATATTAAATCAAGATGATATACCTTTAAA TGTAATTTTAAAAAAGTCAGAAAAATTAGATGTTGAAGTAAATAATAAATTAGGAAATATTAAAGTTTATGATAATCGTC CAGACAATGATGAGTTATCAAAAGTTGGACAATTATATGATATAAAAGTTGAAATAAAGAAAAAGCCAAGTGATACTACT TCTATATTTACTGGACATAGTAGTCAAAACATTGATATTAAGCAGGTGGTGATTGAATGA
Upstream 100 bases:
>100_bases ATTAATGTAGAAATAGACAATGATGATTTAGGAAATGCAAGAGTAACTGTAAATGGTGATGGTAAAAATATAAGTGTCAC TAATAAGTAGGTGATTATTT
Downstream 100 bases:
>100_bases TGAAAAAGAACAAAGGATCTAGTTTAATTACTGTAGTTATTATTTTTAGCATTTTAATTACAGTTGGAACAGCGCTGTTA TCAATGACTATTGGAGATTA
Product: prokaryotic N- methylation motif domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKYICKILKIPMLKISNKNKGFTLIEIIIAFALFAIMMVGIYGIVISAMNTNKAGEVKQKAALYGQLIFEDIKSGDIRKD ETGKIKISNEIILEENRSDSKYSWNGYLDKNNNYYAEIEMNKNTSITLNNSKKEGNSSDEGESEKKISRTFDFNIALSGD NSDSDYIRVKADTNENGKLKYDINSDKNLKLIVNIMKKSNKKIVIIKDSNNKEILTTKSDIKKDEDKDNEIRLNFNFAEY KVKSNLDNNKYRKIEIDILNQDDIPLNVILKKSEKLDVEVNNKLGNIKVYDNRPDNDELSKVGQLYDIKVEIKKKPSDTT SIFTGHSSQNIDIKQVVIE
Sequences:
>Translated_339_residues MKYICKILKIPMLKISNKNKGFTLIEIIIAFALFAIMMVGIYGIVISAMNTNKAGEVKQKAALYGQLIFEDIKSGDIRKD ETGKIKISNEIILEENRSDSKYSWNGYLDKNNNYYAEIEMNKNTSITLNNSKKEGNSSDEGESEKKISRTFDFNIALSGD NSDSDYIRVKADTNENGKLKYDINSDKNLKLIVNIMKKSNKKIVIIKDSNNKEILTTKSDIKKDEDKDNEIRLNFNFAEY KVKSNLDNNKYRKIEIDILNQDDIPLNVILKKSEKLDVEVNNKLGNIKVYDNRPDNDELSKVGQLYDIKVEIKKKPSDTT SIFTGHSSQNIDIKQVVIE >Mature_339_residues MKYICKILKIPMLKISNKNKGFTLIEIIIAFALFAIMMVGIYGIVISAMNTNKAGEVKQKAALYGQLIFEDIKSGDIRKD ETGKIKISNEIILEENRSDSKYSWNGYLDKNNNYYAEIEMNKNTSITLNNSKKEGNSSDEGESEKKISRTFDFNIALSGD NSDSDYIRVKADTNENGKLKYDINSDKNLKLIVNIMKKSNKKIVIIKDSNNKEILTTKSDIKKDEDKDNEIRLNFNFAEY KVKSNLDNNKYRKIEIDILNQDDIPLNVILKKSEKLDVEVNNKLGNIKVYDNRPDNDELSKVGQLYDIKVEIKKKPSDTT SIFTGHSSQNIDIKQVVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38739; Mature: 38739
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYICKILKIPMLKISNKNKGFTLIEIIIAFALFAIMMVGIYGIVISAMNTNKAGEVKQK CHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHH AALYGQLIFEDIKSGDIRKDETGKIKISNEIILEENRSDSKYSWNGYLDKNNNYYAEIEM HHHHHHHHHHHHCCCCCCCCCCCEEEEECEEEEECCCCCCEEEECEEEECCCCEEEEEEE NKNTSITLNNSKKEGNSSDEGESEKKISRTFDFNIALSGDNSDSDYIRVKADTNENGKLK CCCCEEEECCCCCCCCCCCCCCCHHHHHEEEEEEEEECCCCCCCCEEEEEECCCCCCEEE YDINSDKNLKLIVNIMKKSNKKIVIIKDSNNKEILTTKSDIKKDEDKDNEIRLNFNFAEY EECCCCCCEEEEEEEHHCCCCEEEEEECCCCCEEEEEHHHCCCCCCCCCEEEEEEEHEEE KVKSNLDNNKYRKIEIDILNQDDIPLNVILKKSEKLDVEVNNKLGNIKVYDNRPDNDELS EEECCCCCCCEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCCHHHHH KVGQLYDIKVEIKKKPSDTTSIFTGHSSQNIDIKQVVIE HCCCEEEEEEEEEECCCCCCEEEECCCCCCCEEEEEEEC >Mature Secondary Structure MKYICKILKIPMLKISNKNKGFTLIEIIIAFALFAIMMVGIYGIVISAMNTNKAGEVKQK CHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHH AALYGQLIFEDIKSGDIRKDETGKIKISNEIILEENRSDSKYSWNGYLDKNNNYYAEIEM HHHHHHHHHHHHCCCCCCCCCCCEEEEECEEEEECCCCCCEEEECEEEECCCCEEEEEEE NKNTSITLNNSKKEGNSSDEGESEKKISRTFDFNIALSGDNSDSDYIRVKADTNENGKLK CCCCEEEECCCCCCCCCCCCCCCHHHHHEEEEEEEEECCCCCCCCEEEEEECCCCCCEEE YDINSDKNLKLIVNIMKKSNKKIVIIKDSNNKEILTTKSDIKKDEDKDNEIRLNFNFAEY EECCCCCCEEEEEEEHHCCCCEEEEEECCCCCEEEEEHHHCCCCCCCCCEEEEEEEHEEE KVKSNLDNNKYRKIEIDILNQDDIPLNVILKKSEKLDVEVNNKLGNIKVYDNRPDNDELS EEECCCCCCCEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCCEEEECCCCCHHHHH KVGQLYDIKVEIKKKPSDTTSIFTGHSSQNIDIKQVVIE HCCCEEEEEEEEEECCCCCCEEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA