| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934709
Identifier: 187934709
GI number: 187934709
Start: 3465925
End: 3467196
Strand: Reverse
Name: 187934709
Synonym: CLL_A3297
Alternate gene names: NA
Gene position: 3467196-3465925 (Counterclockwise)
Preceding gene: 187935735
Following gene: 187933685
Centisome position: 91.23
GC content: 25.63
Gene sequence:
>1272_bases ATGAAAATAAGTAAAAAAGAAAGAATAATGCTATGTATACTGGCTATTGTAATTGTAGGATTTATTTATTATCAATTCAT ATACTTAAATCAAACCTCAAAGATAGTAGATAAATCAAAAACAAAAAATGAATTAGAACAAAAATATAATAATACAATAG AGACTATAAATTCATTGGAAAATAGAAAAAGTGAAATAAAAATATTAAATACTAAGGTTTCAGATAAATCCACATCATTT TATCCAATAATAAATCAAGAACATCTAATTTTAGAATTAGATAAATTATTAAAAGATAGTGGCCTTGAAGGTGGATTTAT ATTTAATAAAATAGAAGTGACAGAAGTGCCAAAAACAGAGAAATCACAGGAAGATTTAAAGGAAAGTACAATCACACAAA TGACAGAAAAATATAATAATGAAGTTAATGATATTATTGAAGATAATACTTCTTCATCAAAAAATGAATCAGTAAAAGGC AATTCAGAAGAATCATCAAATTCAAATGGAGCTTCATCAGCTAATGAAAATACTTCAAATGAAAGCAAGAAGGATGTAGA ACAAATAAAACTTGAATTGAATTTTTCAGGATCATATACATCACTAGATTCATTTTTAAATTCAGTTAGAAATTATGAAA GAAAGATAGTGGTAAATTCTATAACGATTACTCAAAAAACTATAGATGAAGTTGTTGGGACTATAGGCTTAGAGGTATAT GCTATGCCTAAGGTAGATAATGATTTACAAAAGTATTTAAATTGGACTTTAAATAATACTTATGGCAAATTATCACCATT TAGTTTAGATAGTTCAGTTGGAAATGTAGTGACAGATGGTGAAAAGACAGATAGTGATTTTCTAGTTTCAGTAAAATCAA TAACTTCAGAGTTGCCAAGCATTATAATGGGAAAAAGTAATGATAAATCAAAAGCTACCTATGTATATGCAAATAATAAT GATGTAGAAGAAGCAGAAATTATAATAACCAAAAGTGATGATAAATATTATTGTAAATATAAGACAGTAAATGGAAGTTT TCCAGTTAGTTATGGAGGATTAGGACAAGAATTTACACCAATTTCAGATAATATAAATATAAAAATTTTAAGTGAAAGTA GAGTTAATTCAGATGATAAATCAGGGTTAAGAATAAGTGTAGTGAATAAAACTGATAAGTTAATTAATGTAGAAATAGAC AATGATGATTTAGGAAATGCAAGAGTAACTGTAAATGGTGATGGTAAAAATATAAGTGTCACTAATAAGTAG
Upstream 100 bases:
>100_bases TAATGAATGATGTATTTGTTAATTCAATAGATATTGATGGAGCATTAGAAGGTAATTATTCCTTTGATATTAAATGCATA TTAAAGGAGGTTAATTTAAG
Downstream 100 bases:
>100_bases GTGATTATTTATGAAATATATTTGTAAAATATTAAAAATACCTATGTTAAAAATAAGTAATAAAAATAAGGGATTTACAT TAATTGAAATAATAATAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MKISKKERIMLCILAIVIVGFIYYQFIYLNQTSKIVDKSKTKNELEQKYNNTIETINSLENRKSEIKILNTKVSDKSTSF YPIINQEHLILELDKLLKDSGLEGGFIFNKIEVTEVPKTEKSQEDLKESTITQMTEKYNNEVNDIIEDNTSSSKNESVKG NSEESSNSNGASSANENTSNESKKDVEQIKLELNFSGSYTSLDSFLNSVRNYERKIVVNSITITQKTIDEVVGTIGLEVY AMPKVDNDLQKYLNWTLNNTYGKLSPFSLDSSVGNVVTDGEKTDSDFLVSVKSITSELPSIIMGKSNDKSKATYVYANNN DVEEAEIIITKSDDKYYCKYKTVNGSFPVSYGGLGQEFTPISDNINIKILSESRVNSDDKSGLRISVVNKTDKLINVEID NDDLGNARVTVNGDGKNISVTNK
Sequences:
>Translated_423_residues MKISKKERIMLCILAIVIVGFIYYQFIYLNQTSKIVDKSKTKNELEQKYNNTIETINSLENRKSEIKILNTKVSDKSTSF YPIINQEHLILELDKLLKDSGLEGGFIFNKIEVTEVPKTEKSQEDLKESTITQMTEKYNNEVNDIIEDNTSSSKNESVKG NSEESSNSNGASSANENTSNESKKDVEQIKLELNFSGSYTSLDSFLNSVRNYERKIVVNSITITQKTIDEVVGTIGLEVY AMPKVDNDLQKYLNWTLNNTYGKLSPFSLDSSVGNVVTDGEKTDSDFLVSVKSITSELPSIIMGKSNDKSKATYVYANNN DVEEAEIIITKSDDKYYCKYKTVNGSFPVSYGGLGQEFTPISDNINIKILSESRVNSDDKSGLRISVVNKTDKLINVEID NDDLGNARVTVNGDGKNISVTNK >Mature_423_residues MKISKKERIMLCILAIVIVGFIYYQFIYLNQTSKIVDKSKTKNELEQKYNNTIETINSLENRKSEIKILNTKVSDKSTSF YPIINQEHLILELDKLLKDSGLEGGFIFNKIEVTEVPKTEKSQEDLKESTITQMTEKYNNEVNDIIEDNTSSSKNESVKG NSEESSNSNGASSANENTSNESKKDVEQIKLELNFSGSYTSLDSFLNSVRNYERKIVVNSITITQKTIDEVVGTIGLEVY AMPKVDNDLQKYLNWTLNNTYGKLSPFSLDSSVGNVVTDGEKTDSDFLVSVKSITSELPSIIMGKSNDKSKATYVYANNN DVEEAEIIITKSDDKYYCKYKTVNGSFPVSYGGLGQEFTPISDNINIKILSESRVNSDDKSGLRISVVNKTDKLINVEID NDDLGNARVTVNGDGKNISVTNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47300; Mature: 47300
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISKKERIMLCILAIVIVGFIYYQFIYLNQTSKIVDKSKTKNELEQKYNNTIETINSLE CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRKSEIKILNTKVSDKSTSFYPIINQEHLILELDKLLKDSGLEGGFIFNKIEVTEVPKTE CCCCEEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCC KSQEDLKESTITQMTEKYNNEVNDIIEDNTSSSKNESVKGNSEESSNSNGASSANENTSN CHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESKKDVEQIKLELNFSGSYTSLDSFLNSVRNYERKIVVNSITITQKTIDEVVGTIGLEVY CHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHCEEEEEEEEEEHHHHHHHHHHHHCEEEE AMPKVDNDLQKYLNWTLNNTYGKLSPFSLDSSVGNVVTDGEKTDSDFLVSVKSITSELPS EECCCCHHHHHHHCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCHHEEEHHHHHHHCCH IIMGKSNDKSKATYVYANNNDVEEAEIIITKSDDKYYCKYKTVNGSFPVSYGGLGQEFTP HEECCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCC ISDNINIKILSESRVNSDDKSGLRISVVNKTDKLINVEIDNDDLGNARVTVNGDGKNISV CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEECCCCEEEE TNK CCC >Mature Secondary Structure MKISKKERIMLCILAIVIVGFIYYQFIYLNQTSKIVDKSKTKNELEQKYNNTIETINSLE CCCCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRKSEIKILNTKVSDKSTSFYPIINQEHLILELDKLLKDSGLEGGFIFNKIEVTEVPKTE CCCCEEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCC KSQEDLKESTITQMTEKYNNEVNDIIEDNTSSSKNESVKGNSEESSNSNGASSANENTSN CHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESKKDVEQIKLELNFSGSYTSLDSFLNSVRNYERKIVVNSITITQKTIDEVVGTIGLEVY CHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHCEEEEEEEEEEHHHHHHHHHHHHCEEEE AMPKVDNDLQKYLNWTLNNTYGKLSPFSLDSSVGNVVTDGEKTDSDFLVSVKSITSELPS EECCCCHHHHHHHCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCHHEEEHHHHHHHCCH IIMGKSNDKSKATYVYANNNDVEEAEIIITKSDDKYYCKYKTVNGSFPVSYGGLGQEFTP HEECCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCC ISDNINIKILSESRVNSDDKSGLRISVVNKTDKLINVEIDNDDLGNARVTVNGDGKNISV CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEECCCCEEEE TNK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA