| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935383
Identifier: 187935383
GI number: 187935383
Start: 3462541
End: 3464898
Strand: Reverse
Name: 187935383
Synonym: CLL_A3295
Alternate gene names: NA
Gene position: 3464898-3462541 (Counterclockwise)
Preceding gene: 187933685
Following gene: 187935367
Centisome position: 91.17
GC content: 26.17
Gene sequence:
>2358_bases ATGATGAAAAAGAACAAAGGATCTAGTTTAATTACTGTAGTTATTATTTTTAGCATTTTAATTACAGTTGGAACAGCGCT GTTATCAATGACTATTGGAGATTATAAAATGAGAACTAAGGAAAGTAAAAGAATAGAGAATTTATATGGGTCAGACTCAG GATTAGATGTTGCCTACGATATAATAATAAAAACTTTTGATTCAGCTACTCAGTTTGGAGATGAAGAAGTAAAAGCACTA AAAAGTAAAGATGGAAATCCTGATAGTCCTAATGATACTCAATATAAAGAGTATCAAAAGGAAATTTATTATTGGAAACA TTATAATGATGATAAAGATGAATCACACAAAATTAGCAAAACAAAAATTAAAGAAGAAATAGAAAAAAGAAAGAAAGAAA TTGAAATTCTTATTAATAAAGAATTTAGAAGAACATTTAAAAATTTCATATATGTAAATGAAGCTGAAATAAGTAAAAGT GAAGACGATTCCAATCAAAGTAAAGAGTATAAGCCTAATAAACTTAAAGAATTGATAGAAGCAAGAAAATATGTAGATAG TGTTAGTGGGATAAAAGAAGGGGATTTATCTTATAAAGAAGTTAGTTTAACTTCACAAGCAAATAAACCAGAACTTGTTG CTGATATTTCTGATCCAGAAAATGAAAATGAAGAAGAAGTGTATACAATAAAAATAACATCAACATTTGAAACAAAAGAG GCTAATACCAATATAATAGGAACTAATACCAGAAAAGTTCAAACAACTTATAATATAGTAGTTCCGGACTATAAAGATAT AGCTTTTTCAGAAAGTATTTCAAAGGTACAAAATAGTACTGTTTTAAATGATAAAGTTATGGTTATTGGTAGAAACATGA ATGTAAATCAGTATAATAAGATCACTATAGATGGAGACATATTTGTCTGGGGAGATAGTCCTACAATTACTAATAAGGTT TATGATAAATATAAAGGCGGAATAAACTTAAAAAGTTGTGCTATAAATTTTAATGGTGAAGTTGTCACTGAGAAGACATT CAATATAGAGAATAATGTAAAATCAAATATAAATGGAAATTTATATGCTAGAAATGTTTATATGGGAAACTTAAATGGAA GTCCATCTGAAAATTCAAATTTGACAATTAAAGAATCAAAAAAAGATGATAATGAAGGTAATATTTCTAATAAAAATAGT GAAGAAAGCGGACAAGTAGTACTTGATAATGACATTACTTTAAAATCTAGAAATACTAATGTTAGTATAGATAATTTTTA TGGTATTAATGATAAAAATATTAAGTATGGCAATGTATTTAATGCTTCTTCAGAAGGAACTAATGAAAGAACATCTAGTA GCATTATAGTTAATGGAGATGAAAATTCAAATATAAAAATTAATAATAAAGCTTATATCATGGGAGTAGCACATATTGAT ACGTTTCCTGAATACCAAACAGGTGAATCTACAGGAGTTAAAGGGAATTATATAGCTTATGCAACACCCTTAAATAATGA GGAGAAATTTGAATATTATGATCCACTGCAATTATTAGATGAAGATAATATTTTGAATAAAAGTAAACACTTTGTTGACT ATTGGCAAGTTAAATTATCAGATGTAAACACTGGAGGAATTCAATTGCCTGATGAGATTCATTCTGTAGGAACTATTGTA TATAAAGATAAATTTGGTAATATTCAAGTTAAAGATAGCAGTTACACATTAGATATAGATAATAAGATAAAGGAAAAACA AGTAGAGTATGCATCAAAAGTATATGCAATGGGAAAAAAAGTAGGAATGAATTGGTATGATACTTTAGGTAATTTAGGGA GTCCAGTTAATTATTTAATGAAATTAGATAATATCCCAATAGATTATGATTTAGAACGTGAAAATTCAAATAATGAAAAA GCAATATTTAATAATGAAGATAATAAGACAATAATAATTAGAGGAAAAAATGCATCTTCAATTTATTATGATGGCTCTAA TGTAATTGAAGAAAAAGATAAAATAGTTATAAATGCAGATAGTGGAGAAGTTAATTCATTTATAGCAACTAATGGAAATG TGATTATTGATGGTGAAATTAATTTTAATGGAAATATAGTTACTGAAGGAAATTTAACCATTCAAGGAAATCAAGAGAAG AATATAAAATATGATAAGGAATTATGTGACAGAATTAAAGTTTCTAATGAGGAACTTTTTTGTGCTGTATTTGGGGATTC TAGTGACGAAGAGAATATAGATGATAGTGAACCAAATCTCAATAACAAGGATGATTTAAATATTCAATATGATTTAAATA AATTCTTAAAGACTAAGATTTGGAAAATTATAAAGTAA
Upstream 100 bases:
>100_bases ATGATATAAAAGTTGAAATAAAGAAAAAGCCAAGTGATACTACTTCTATATTTACTGGACATAGTAGTCAAAACATTGAT ATTAAGCAGGTGGTGATTGA
Downstream 100 bases:
>100_bases TATTAATAAAATGGAGGTGGATTTGATGTTTAAGACAAAGAAAAAAGGTTTTACTTTAGTGGAACTTATAATAGTTATGG TATTAACAATTGTTATATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 785; Mature: 785
Protein sequence:
>785_residues MMKKNKGSSLITVVIIFSILITVGTALLSMTIGDYKMRTKESKRIENLYGSDSGLDVAYDIIIKTFDSATQFGDEEVKAL KSKDGNPDSPNDTQYKEYQKEIYYWKHYNDDKDESHKISKTKIKEEIEKRKKEIEILINKEFRRTFKNFIYVNEAEISKS EDDSNQSKEYKPNKLKELIEARKYVDSVSGIKEGDLSYKEVSLTSQANKPELVADISDPENENEEEVYTIKITSTFETKE ANTNIIGTNTRKVQTTYNIVVPDYKDIAFSESISKVQNSTVLNDKVMVIGRNMNVNQYNKITIDGDIFVWGDSPTITNKV YDKYKGGINLKSCAINFNGEVVTEKTFNIENNVKSNINGNLYARNVYMGNLNGSPSENSNLTIKESKKDDNEGNISNKNS EESGQVVLDNDITLKSRNTNVSIDNFYGINDKNIKYGNVFNASSEGTNERTSSSIIVNGDENSNIKINNKAYIMGVAHID TFPEYQTGESTGVKGNYIAYATPLNNEEKFEYYDPLQLLDEDNILNKSKHFVDYWQVKLSDVNTGGIQLPDEIHSVGTIV YKDKFGNIQVKDSSYTLDIDNKIKEKQVEYASKVYAMGKKVGMNWYDTLGNLGSPVNYLMKLDNIPIDYDLERENSNNEK AIFNNEDNKTIIIRGKNASSIYYDGSNVIEEKDKIVINADSGEVNSFIATNGNVIIDGEINFNGNIVTEGNLTIQGNQEK NIKYDKELCDRIKVSNEELFCAVFGDSSDEENIDDSEPNLNNKDDLNIQYDLNKFLKTKIWKIIK
Sequences:
>Translated_785_residues MMKKNKGSSLITVVIIFSILITVGTALLSMTIGDYKMRTKESKRIENLYGSDSGLDVAYDIIIKTFDSATQFGDEEVKAL KSKDGNPDSPNDTQYKEYQKEIYYWKHYNDDKDESHKISKTKIKEEIEKRKKEIEILINKEFRRTFKNFIYVNEAEISKS EDDSNQSKEYKPNKLKELIEARKYVDSVSGIKEGDLSYKEVSLTSQANKPELVADISDPENENEEEVYTIKITSTFETKE ANTNIIGTNTRKVQTTYNIVVPDYKDIAFSESISKVQNSTVLNDKVMVIGRNMNVNQYNKITIDGDIFVWGDSPTITNKV YDKYKGGINLKSCAINFNGEVVTEKTFNIENNVKSNINGNLYARNVYMGNLNGSPSENSNLTIKESKKDDNEGNISNKNS EESGQVVLDNDITLKSRNTNVSIDNFYGINDKNIKYGNVFNASSEGTNERTSSSIIVNGDENSNIKINNKAYIMGVAHID TFPEYQTGESTGVKGNYIAYATPLNNEEKFEYYDPLQLLDEDNILNKSKHFVDYWQVKLSDVNTGGIQLPDEIHSVGTIV YKDKFGNIQVKDSSYTLDIDNKIKEKQVEYASKVYAMGKKVGMNWYDTLGNLGSPVNYLMKLDNIPIDYDLERENSNNEK AIFNNEDNKTIIIRGKNASSIYYDGSNVIEEKDKIVINADSGEVNSFIATNGNVIIDGEINFNGNIVTEGNLTIQGNQEK NIKYDKELCDRIKVSNEELFCAVFGDSSDEENIDDSEPNLNNKDDLNIQYDLNKFLKTKIWKIIK >Mature_785_residues MMKKNKGSSLITVVIIFSILITVGTALLSMTIGDYKMRTKESKRIENLYGSDSGLDVAYDIIIKTFDSATQFGDEEVKAL KSKDGNPDSPNDTQYKEYQKEIYYWKHYNDDKDESHKISKTKIKEEIEKRKKEIEILINKEFRRTFKNFIYVNEAEISKS EDDSNQSKEYKPNKLKELIEARKYVDSVSGIKEGDLSYKEVSLTSQANKPELVADISDPENENEEEVYTIKITSTFETKE ANTNIIGTNTRKVQTTYNIVVPDYKDIAFSESISKVQNSTVLNDKVMVIGRNMNVNQYNKITIDGDIFVWGDSPTITNKV YDKYKGGINLKSCAINFNGEVVTEKTFNIENNVKSNINGNLYARNVYMGNLNGSPSENSNLTIKESKKDDNEGNISNKNS EESGQVVLDNDITLKSRNTNVSIDNFYGINDKNIKYGNVFNASSEGTNERTSSSIIVNGDENSNIKINNKAYIMGVAHID TFPEYQTGESTGVKGNYIAYATPLNNEEKFEYYDPLQLLDEDNILNKSKHFVDYWQVKLSDVNTGGIQLPDEIHSVGTIV YKDKFGNIQVKDSSYTLDIDNKIKEKQVEYASKVYAMGKKVGMNWYDTLGNLGSPVNYLMKLDNIPIDYDLERENSNNEK AIFNNEDNKTIIIRGKNASSIYYDGSNVIEEKDKIVINADSGEVNSFIATNGNVIIDGEINFNGNIVTEGNLTIQGNQEK NIKYDKELCDRIKVSNEELFCAVFGDSSDEENIDDSEPNLNNKDDLNIQYDLNKFLKTKIWKIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88985; Mature: 88985
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKNKGSSLITVVIIFSILITVGTALLSMTIGDYKMRTKESKRIENLYGSDSGLDVAYD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCCCEEEE IIIKTFDSATQFGDEEVKALKSKDGNPDSPNDTQYKEYQKEIYYWKHYNDDKDESHKISK EEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCHHCCHHH TKIKEEIEKRKKEIEILINKEFRRTFKNFIYVNEAEISKSEDDSNQSKEYKPNKLKELIE HHHHHHHHHHHHHEEEEECHHHHHHHHHEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHH ARKYVDSVSGIKEGDLSYKEVSLTSQANKPELVADISDPENENEEEVYTIKITSTFETKE HHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEEEEEEECCC ANTNIIGTNTRKVQTTYNIVVPDYKDIAFSESISKVQNSTVLNDKVMVIGRNMNVNQYNK CCCCEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCEEECCEEEEEECCCCCCCCEE ITIDGDIFVWGDSPTITNKVYDKYKGGINLKSCAINFNGEVVTEKTFNIENNVKSNINGN EEECCEEEEECCCCCCHHHHHHHHCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCC LYARNVYMGNLNGSPSENSNLTIKESKKDDNEGNISNKNSEESGQVVLDNDITLKSRNTN EEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCE VSIDNFYGINDKNIKYGNVFNASSEGTNERTSSSIIVNGDENSNIKINNKAYIMGVAHID EEEEEEECCCCCCEEECCEECCCCCCCCCCCCCEEEEECCCCCCEEECCCEEEEEEEECC TFPEYQTGESTGVKGNYIAYATPLNNEEKFEYYDPLQLLDEDNILNKSKHFVDYWQVKLS CCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCHHHCCCCCCCCCCCCEEEEEEEEEE DVNTGGIQLPDEIHSVGTIVYKDKFGNIQVKDSSYTLDIDNKIKEKQVEYASKVYAMGKK ECCCCCEECCHHHHHCEEEEEEECCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHH VGMNWYDTLGNLGSPVNYLMKLDNIPIDYDLERENSNNEKAIFNNEDNKTIIIRGKNASS CCCCHHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCEEEEEECCCCCE IYYDGSNVIEEKDKIVINADSGEVNSFIATNGNVIIDGEINFNGNIVTEGNLTIQGNQEK EEECCCHHCCCCCCEEEECCCCCCCEEEEECCCEEEEEEEECCCCEEECCEEEEECCCCC NIKYDKELCDRIKVSNEELFCAVFGDSSDEENIDDSEPNLNNKDDLNIQYDLNKFLKTKI CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHH WKIIK HHHCC >Mature Secondary Structure MMKKNKGSSLITVVIIFSILITVGTALLSMTIGDYKMRTKESKRIENLYGSDSGLDVAYD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCCCEEEE IIIKTFDSATQFGDEEVKALKSKDGNPDSPNDTQYKEYQKEIYYWKHYNDDKDESHKISK EEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCHHCCHHH TKIKEEIEKRKKEIEILINKEFRRTFKNFIYVNEAEISKSEDDSNQSKEYKPNKLKELIE HHHHHHHHHHHHHEEEEECHHHHHHHHHEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHH ARKYVDSVSGIKEGDLSYKEVSLTSQANKPELVADISDPENENEEEVYTIKITSTFETKE HHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEEEEEEECCC ANTNIIGTNTRKVQTTYNIVVPDYKDIAFSESISKVQNSTVLNDKVMVIGRNMNVNQYNK CCCCEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCEEECCEEEEEECCCCCCCCEE ITIDGDIFVWGDSPTITNKVYDKYKGGINLKSCAINFNGEVVTEKTFNIENNVKSNINGN EEECCEEEEECCCCCCHHHHHHHHCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCC LYARNVYMGNLNGSPSENSNLTIKESKKDDNEGNISNKNSEESGQVVLDNDITLKSRNTN EEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCE VSIDNFYGINDKNIKYGNVFNASSEGTNERTSSSIIVNGDENSNIKINNKAYIMGVAHID EEEEEEECCCCCCEEECCEECCCCCCCCCCCCCEEEEECCCCCCEEECCCEEEEEEEECC TFPEYQTGESTGVKGNYIAYATPLNNEEKFEYYDPLQLLDEDNILNKSKHFVDYWQVKLS CCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCHHHCCCCCCCCCCCCEEEEEEEEEE DVNTGGIQLPDEIHSVGTIVYKDKFGNIQVKDSSYTLDIDNKIKEKQVEYASKVYAMGKK ECCCCCEECCHHHHHCEEEEEEECCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHH VGMNWYDTLGNLGSPVNYLMKLDNIPIDYDLERENSNNEKAIFNNEDNKTIIIRGKNASS CCCCHHHHHCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCEEEEEECCCCCE IYYDGSNVIEEKDKIVINADSGEVNSFIATNGNVIIDGEINFNGNIVTEGNLTIQGNQEK EEECCCHHCCCCCCEEEECCCCCCCEEEEECCCEEEEEEEECCCCEEECCEEEEECCCCC NIKYDKELCDRIKVSNEELFCAVFGDSSDEENIDDSEPNLNNKDDLNIQYDLNKFLKTKI CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHH WKIIK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA