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The map label for this gene is copB [H]

Identifier: 187928920

GI number: 187928920

Start: 1928081

End: 1929370

Strand: Reverse

Name: copB [H]

Synonym: Rpic_1839

Alternate gene names: 187928920

Gene position: 1929370-1928081 (Counterclockwise)

Preceding gene: 187928921

Following gene: 187928919

Centisome position: 48.94

GC content: 60.78

Gene sequence:

>1290_bases
ATGACCACGCATAAGCACGTTAAGACAGCACTGGCAGTTGCCTTGGCCCTTGTCAGCATCAGCGCCGCATCTGCACAGGA
ATCTACAGCGACCTACGACACCATGGCGCCAAGCTCGGGCGCCGACACTCAGCCAGCAGCCCGCGGCTCGATGCAGGGCA
TGGACCACGGCTCGATGCAGGGCATGGATCAGGGCTCGATGCAGGGCATGGATCAGGGCTCGATGCAGGGCATGGATCAG
GGCTCGATGCAGGGCATGGACCACGGCTCGATGCAGGGCATGGATCAGGGCTCGATGCAGGGCATGGACCACGGCTCGAT
GCAGGGCATGGATCAGGGCTCGATGCAGGGCATGGATCAGGGCTCGATGCAGGGCATGGATCAGGGCTCGATGCAGGGCA
TGGACCACGGCTCGATGCAGGGCATGGACCACGGCTCGATGCAGGGCATGGACCACGGCTCGATGCAGGGCATGGATCAG
GGCTCGATGCAGGGCATGGACCACGGCTCGATGCAGGGCATGGACCATGGCTCGATGCAAATGCAAGGCGGCTCGGCGCC
ACCTGATGCACGGGATCCGAATGCATACTCGGGTGGATATCAACTGGGTGTTGGCAAGTACGCGCTGAGCAACACCCGCC
AACTCATGATGGCCGATGAACACAATTTCGGATCGTTCTTAATTGATCGCCTGGAGTGGGTGCGGGGGCCCAACTCCAAT
GCCGCGTCTTATGAGGCCCAAGCGTGGTACGGAAGCACTTACAACAAGGTCGTACTGAAGGCGGAAGGCGATGTGAAAAA
AGGTCGACTCGAGGAGGCGCGCACCGAGTTGCTATGGGGACATGCGATCACGACGTTCTGGGACACCCAGCTTGGGATCC
GGAACGACGTCGGATCGGGACGTCCGGCGCGGAACTGGGCGGCTTTCGGCGTGCAAGGCCTAGCGCCATATTGGTTCAAC
ATCCAGGCCACCGCATACGTCGGTAATAGCGGTCGCACCGCGCTGCGACTGTCCACGGAGTATGAATTGCTGCTGAGCCA
GCGTCTCATTCTACAACCACGCGTGGAAGCCAACTTCTATGGGAAAAATGATCCGGCTCTGGAGATAGGCAGCGGTCTGT
CCAGCGCTAGCGTCGGCCTGCGTTTGCGTTACGAATTCAGCCGGCAGTTCGCGCCTTACATCGGCGTCGAGCGGTACCAG
ACTTTTGGCAACACCGCCAACATGATTCGGGCCGATGGCGGCCGAAGCGGTGAGACCCGATTTGTGGCGGGCCTGCGCGT
TTGGTACTAA

Upstream 100 bases:

>100_bases
GCTCTTGGCCGATGGGCTTGGCACTGCCATCTCATGCTTCATATGGATGCAGGTATGTTCCGTGAAGTGATCGTCGCCTA
AGCCCGGATCGACAAGTCAA

Downstream 100 bases:

>100_bases
CCGTTCTCTTTTTACATCACCAGGAGGTATTGACATGTTGAACAATCGTTACATCGCAAGCATTGCGGTCGCGGCATCGG
CCATTTTCGCCAGCACGGCC

Product: copper resistance B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MTTHKHVKTALAVALALVSISAASAQESTATYDTMAPSSGADTQPAARGSMQGMDHGSMQGMDQGSMQGMDQGSMQGMDQ
GSMQGMDHGSMQGMDQGSMQGMDHGSMQGMDQGSMQGMDQGSMQGMDQGSMQGMDHGSMQGMDHGSMQGMDHGSMQGMDQ
GSMQGMDHGSMQGMDHGSMQMQGGSAPPDARDPNAYSGGYQLGVGKYALSNTRQLMMADEHNFGSFLIDRLEWVRGPNSN
AASYEAQAWYGSTYNKVVLKAEGDVKKGRLEEARTELLWGHAITTFWDTQLGIRNDVGSGRPARNWAAFGVQGLAPYWFN
IQATAYVGNSGRTALRLSTEYELLLSQRLILQPRVEANFYGKNDPALEIGSGLSSASVGLRLRYEFSRQFAPYIGVERYQ
TFGNTANMIRADGGRSGETRFVAGLRVWY

Sequences:

>Translated_429_residues
MTTHKHVKTALAVALALVSISAASAQESTATYDTMAPSSGADTQPAARGSMQGMDHGSMQGMDQGSMQGMDQGSMQGMDQ
GSMQGMDHGSMQGMDQGSMQGMDHGSMQGMDQGSMQGMDQGSMQGMDQGSMQGMDHGSMQGMDHGSMQGMDHGSMQGMDQ
GSMQGMDHGSMQGMDHGSMQMQGGSAPPDARDPNAYSGGYQLGVGKYALSNTRQLMMADEHNFGSFLIDRLEWVRGPNSN
AASYEAQAWYGSTYNKVVLKAEGDVKKGRLEEARTELLWGHAITTFWDTQLGIRNDVGSGRPARNWAAFGVQGLAPYWFN
IQATAYVGNSGRTALRLSTEYELLLSQRLILQPRVEANFYGKNDPALEIGSGLSSASVGLRLRYEFSRQFAPYIGVERYQ
TFGNTANMIRADGGRSGETRFVAGLRVWY
>Mature_428_residues
TTHKHVKTALAVALALVSISAASAQESTATYDTMAPSSGADTQPAARGSMQGMDHGSMQGMDQGSMQGMDQGSMQGMDQG
SMQGMDHGSMQGMDQGSMQGMDHGSMQGMDQGSMQGMDQGSMQGMDQGSMQGMDHGSMQGMDHGSMQGMDHGSMQGMDQG
SMQGMDHGSMQGMDHGSMQMQGGSAPPDARDPNAYSGGYQLGVGKYALSNTRQLMMADEHNFGSFLIDRLEWVRGPNSNA
ASYEAQAWYGSTYNKVVLKAEGDVKKGRLEEARTELLWGHAITTFWDTQLGIRNDVGSGRPARNWAAFGVQGLAPYWFNI
QATAYVGNSGRTALRLSTEYELLLSQRLILQPRVEANFYGKNDPALEIGSGLSSASVGLRLRYEFSRQFAPYIGVERYQT
FGNTANMIRADGGRSGETRFVAGLRVWY

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 46290; Mature: 46159

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
9.1 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.9 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEEEEECC
>Mature Secondary Structure 
TTHKHVKTALAVALALVSISAASAQESTATYDTMAPSSGADTQPAARGSMQGMDHGSMQ
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GMDQGSMQGMDQGSMQGMDQGSMQGMDHGSMQGMDQGSMQGMDHGSMQGMDQGSMQGMDQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSMQGMDQGSMQGMDHGSMQGMDHGSMQGMDHGSMQGMDQGSMQGMDHGSMQGMDHGSMQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
MQGGSAPPDARDPNAYSGGYQLGVGKYALSNTRQLMMADEHNFGSFLIDRLEWVRGPNSN
ECCCCCCCCCCCCCCCCCCEEECCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCC
AASYEAQAWYGSTYNKVVLKAEGDVKKGRLEEARTELLWGHAITTFWDTQLGIRNDVGSG
CCCEECCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RPARNWAAFGVQGLAPYWFNIQATAYVGNSGRTALRLSTEYELLLSQRLILQPRVEANFY
CCCCCHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEC
GKNDPALEIGSGLSSASVGLRLRYEFSRQFAPYIGVERYQTFGNTANMIRADGGRSGETR
CCCCCCEEECCCCCCCCCCEEEEEECCCCCCCHHCHHHHHHHCCCCCEEEECCCCCCCEE
FVAGLRVWY
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]