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The map label for this gene is copC [H]

Identifier: 187928919

GI number: 187928919

Start: 1927660

End: 1928046

Strand: Reverse

Name: copC [H]

Synonym: Rpic_1838

Alternate gene names: 187928919

Gene position: 1928046-1927660 (Counterclockwise)

Preceding gene: 187928920

Following gene: 187928918

Centisome position: 48.9

GC content: 57.36

Gene sequence:

>387_bases
ATGTTGAACAATCGTTACATCGCAAGCATTGCGGTCGCGGCATCGGCCATTTTCGCCAGCACGGCCGCATTCGCCCATCC
TAAGCTGCTGTCTTCGACGCCTGCCGACAAAGCGGAGGTCGCCGCGCCGGCAAAGATCGAACTCAAGTTCTCGGAAAATC
TCTCGACGCAATTCTCGGGAGCAAATCTCGTTATGACTGAGATGCCTGGCATGTCCGGTCATGACGCCATGAAAGTCGCC
GCGAAAGTCGCTGCCGGCGATGACCCCAAGACGATGGTGATCACGCCCGCACAGCCGCTGATGACGGGTACGTACAAGGT
CGAATGGCGTGCTGTCTCGTCGGATACGCACCCGATGTCGGGGAACTTCTCGTTCAAGGTGAAGTAA

Upstream 100 bases:

>100_bases
ATTCGGGCCGATGGCGGCCGAAGCGGTGAGACCCGATTTGTGGCGGGCCTGCGCGTTTGGTACTAACCGTTCTCTTTTTA
CATCACCAGGAGGTATTGAC

Downstream 100 bases:

>100_bases
GGTTATGGCAGACGATTGGCTCAATATCGCCCTGCGCTTTGCGCTATACGTGGATCTGACGATCCTGTTTGGAGTCTCGT
TATTCGGTGCCTACGCTCTG

Product: copper resistance protein CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MLNNRYIASIAVAASAIFASTAAFAHPKLLSSTPADKAEVAAPAKIELKFSENLSTQFSGANLVMTEMPGMSGHDAMKVA
AKVAAGDDPKTMVITPAQPLMTGTYKVEWRAVSSDTHPMSGNFSFKVK

Sequences:

>Translated_128_residues
MLNNRYIASIAVAASAIFASTAAFAHPKLLSSTPADKAEVAAPAKIELKFSENLSTQFSGANLVMTEMPGMSGHDAMKVA
AKVAAGDDPKTMVITPAQPLMTGTYKVEWRAVSSDTHPMSGNFSFKVK
>Mature_128_residues
MLNNRYIASIAVAASAIFASTAAFAHPKLLSSTPADKAEVAAPAKIELKFSENLSTQFSGANLVMTEMPGMSGHDAMKVA
AKVAAGDDPKTMVITPAQPLMTGTYKVEWRAVSSDTHPMSGNFSFKVK

Specific function: Mediates copper resistance by sequestration of copper in the periplasm along with the copper-binding protein CopA [H]

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=108, Percent_Identity=37.037037037037, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 13492; Mature: 13492

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNNRYIASIAVAASAIFASTAAFAHPKLLSSTPADKAEVAAPAKIELKFSENLSTQFSG
CCCCEEEHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEEEEEEECCCCCCEECC
ANLVMTEMPGMSGHDAMKVAAKVAAGDDPKTMVITPAQPLMTGTYKVEWRAVSSDTHPMS
CEEEEEECCCCCCCHHHHHEEHCCCCCCCCEEEEECCCCCEECEEEEEEEEECCCCCCCC
GNFSFKVK
CCEEEEEC
>Mature Secondary Structure
MLNNRYIASIAVAASAIFASTAAFAHPKLLSSTPADKAEVAAPAKIELKFSENLSTQFSG
CCCCEEEHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCEEEEEEECCCCCCEECC
ANLVMTEMPGMSGHDAMKVAAKVAAGDDPKTMVITPAQPLMTGTYKVEWRAVSSDTHPMS
CEEEEEECCCCCCCHHHHHEEHCCCCCCCCEEEEECCCCCEECEEEEEEEEECCCCCCCC
GNFSFKVK
CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]