Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187928841
Identifier: 187928841
GI number: 187928841
Start: 1855115
End: 1855510
Strand: Reverse
Name: 187928841
Synonym: Rpic_1758
Alternate gene names: NA
Gene position: 1855510-1855115 (Counterclockwise)
Preceding gene: 187928842
Following gene: 187928838
Centisome position: 47.06
GC content: 59.6
Gene sequence:
>396_bases ATGAAAACGAAGAAACACGCCTTGCTGTTTGCGGCGTTGCTGTTGGGTGGGATGTCGGCTTCGTATGCTTTGGAAATGAC CGGGTTGAAACCGGGCGTGCCTGCGTCGACGGCGACGGCGCAGGCGATGGCGAAGCGTCACGCGACCTTGTATGGCGATC CAGCCGGCCAATCTCAGGCCAGTCGCATTATCGACGTGAAGCCAGGGATGCGGTATGTCAACGTGGACTCTGGCGAGACG GTGGCGTTTCGGGCCGGCGAGAAGATCGTCGCATGGACCTTCGCCCAGATGGTCAGGGATACGAGTGTGGACCTTGGCTT GTTGATGCCGGATCTGCCGGGTAGCGCTGGCGTGCGCGTCTATATTGATAGAAGCGACCTCTTCACAGGTGGCTGA
Upstream 100 bases:
>100_bases CCCGATTGCCTATTTGTAATCGCCGGGCAAGGCTGCAGCATGCGTACAATTTATACACTCGTTTTCATAGATCAACGAAG TCTCTAGAAAGGAGATGACT
Downstream 100 bases:
>100_bases ACGTTGCTGAACCGGTGAACTACAGGCCCCGCACAATGCGGGGCCTTTTTCATCGTCATTGGCGTCGGTTCTGCCGCTTA GCAATACACGAGGCGATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MKTKKHALLFAALLLGGMSASYALEMTGLKPGVPASTATAQAMAKRHATLYGDPAGQSQASRIIDVKPGMRYVNVDSGET VAFRAGEKIVAWTFAQMVRDTSVDLGLLMPDLPGSAGVRVYIDRSDLFTGG
Sequences:
>Translated_131_residues MKTKKHALLFAALLLGGMSASYALEMTGLKPGVPASTATAQAMAKRHATLYGDPAGQSQASRIIDVKPGMRYVNVDSGET VAFRAGEKIVAWTFAQMVRDTSVDLGLLMPDLPGSAGVRVYIDRSDLFTGG >Mature_131_residues MKTKKHALLFAALLLGGMSASYALEMTGLKPGVPASTATAQAMAKRHATLYGDPAGQSQASRIIDVKPGMRYVNVDSGET VAFRAGEKIVAWTFAQMVRDTSVDLGLLMPDLPGSAGVRVYIDRSDLFTGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13833; Mature: 13833
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKKHALLFAALLLGGMSASYALEMTGLKPGVPASTATAQAMAKRHATLYGDPAGQSQA CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCC SRIIDVKPGMRYVNVDSGETVAFRAGEKIVAWTFAQMVRDTSVDLGLLMPDLPGSAGVRV CEEEECCCCCEEEECCCCCEEEEECCCEEEHHHHHHHHHCCCCCEEEEECCCCCCCCEEE YIDRSDLFTGG EEECCCCCCCC >Mature Secondary Structure MKTKKHALLFAALLLGGMSASYALEMTGLKPGVPASTATAQAMAKRHATLYGDPAGQSQA CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCC SRIIDVKPGMRYVNVDSGETVAFRAGEKIVAWTFAQMVRDTSVDLGLLMPDLPGSAGVRV CEEEECCCCCEEEECCCCCEEEEECCCEEEHHHHHHHHHCCCCCEEEEECCCCCCCCEEE YIDRSDLFTGG EEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA