Click here to switch to the map view.

The map label for this gene is flgB [H]

Identifier: 187928838

GI number: 187928838

Start: 1852569

End: 1852991

Strand: Reverse

Name: flgB [H]

Synonym: Rpic_1755

Alternate gene names: 187928838

Gene position: 1852991-1852569 (Counterclockwise)

Preceding gene: 187928841

Following gene: 187928836

Centisome position: 47.0

GC content: 57.68

Gene sequence:

>423_bases
ATGGACACGCCATACGTCGCAAAATGGGCGCGTAGCGAAGACAGCGTTCATGAGCAAGCGCTGCGACTTCGCACACGGAG
GTTCGAGCTGCTGTCTGCAAATATTGCAAATGCGGATACGCCGAACTACAAGGCGCGCGATATCGACTTCAGCGCCGAGT
TGGATAGGGTGATGGGCAGTGGCCAGAATTTTGCGGGCATGACCATGACTTCGCCGCGACACATCGAGGCAAGCAAGCCC
GCGCTGGAAGAGGATCTGATGTATCGCGTCCCCCTGCAGTCGAGTATGGACGGCAACACCGTGGAGATGGACGTCGAGCG
TGTGGCGTTTGCAGAGAACGCGCTGCGGATGCGGTTCTCCATTCAAAAGACTGCCGACGAGTACAAGGACATGCTCAAGC
TCTACCAGGACATGCGGCCCTAG

Upstream 100 bases:

>100_bases
GCCGGTAATGGGAAACTCACGAAAAGAGGTCGCTTCTCTCGAAGCAAGATCGACTGCCTTTGCAATACGCTGCGGGTTCC
GATCTAGTTGGAGAGTAAGG

Downstream 100 bases:

>100_bases
CGGGGAAACCGCGACTACTGGCAGGGCGGCTTGGGTGCGGCGACAGCGCTGGACGCGTCTCTGGAAGACGGCTCCGGTGT
GCTCGCTGCGGATTCCTGCT

Product: flagellar basal-body rod protein FlgB

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDTPYVAKWARSEDSVHEQALRLRTRRFELLSANIANADTPNYKARDIDFSAELDRVMGSGQNFAGMTMTSPRHIEASKP
ALEEDLMYRVPLQSSMDGNTVEMDVERVAFAENALRMRFSIQKTADEYKDMLKLYQDMRP

Sequences:

>Translated_140_residues
MDTPYVAKWARSEDSVHEQALRLRTRRFELLSANIANADTPNYKARDIDFSAELDRVMGSGQNFAGMTMTSPRHIEASKP
ALEEDLMYRVPLQSSMDGNTVEMDVERVAFAENALRMRFSIQKTADEYKDMLKLYQDMRP
>Mature_140_residues
MDTPYVAKWARSEDSVHEQALRLRTRRFELLSANIANADTPNYKARDIDFSAELDRVMGSGQNFAGMTMTSPRHIEASKP
ALEEDLMYRVPLQSSMDGNTVEMDVERVAFAENALRMRFSIQKTADEYKDMLKLYQDMRP

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787313, Length=125, Percent_Identity=48, Blast_Score=114, Evalue=3e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006300 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 16115; Mature: 16115

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTPYVAKWARSEDSVHEQALRLRTRRFELLSANIANADTPNYKARDIDFSAELDRVMGS
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC
GQNFAGMTMTSPRHIEASKPALEEDLMYRVPLQSSMDGNTVEMDVERVAFAENALRMRFS
CCCCCCEECCCCCCCCCCCCCHHHHHEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
IQKTADEYKDMLKLYQDMRP
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDTPYVAKWARSEDSVHEQALRLRTRRFELLSANIANADTPNYKARDIDFSAELDRVMGS
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC
GQNFAGMTMTSPRHIEASKPALEEDLMYRVPLQSSMDGNTVEMDVERVAFAENALRMRFS
CCCCCCEECCCCCCCCCCCCCHHHHHEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH
IQKTADEYKDMLKLYQDMRP
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 2404955; 11677609; 8200538; 2181149 [H]