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The map label for this gene is nusB

Identifier: 187927756

GI number: 187927756

Start: 701912

End: 702379

Strand: Reverse

Name: nusB

Synonym: Rpic_0660

Alternate gene names: 187927756

Gene position: 702379-701912 (Counterclockwise)

Preceding gene: 187927757

Following gene: 187927755

Centisome position: 17.82

GC content: 65.17

Gene sequence:

>468_bases
ATGACGCAAGACAATTCCCAAGCCAAGGCCAAAGCGCCCGCCAAGAGCGCGCGCCGCCGTGCGCGCGAACTGGCGCTGCA
GGGTCTGTATCAATGGCTGCTCAATCGCAACGACCCGGGCGTGGTCGAGGCGCATCTGCAGGACGCGCAAGGCTTCAACA
AGGCCGACCGCGCGCACTTCGACGCGCTGCTGCACGGTGCGATCCGCGAAGAAACCACGCTGACCGAGGCGTTCACGCCG
TACCTGGATCGCCCGGTTGCCGAGCTGTCGCCGGTCGAGCGTGCCGCCCTGCTGGTCGGCGCGTACGAGTTGGTGCACTG
CGTGGACATCCCGTACAAGGTCGTGATCAACGAAGCGGTTGAACTGACCAAGACCTTCGGCGGCGTGGAAGGCTACAAGT
ACGTCAACGGCGTGCTGGACAAGCTGGCTACGCAAGTGCGCGCTGTCGAGGTCGCTGCCCGCCGGTAA

Upstream 100 bases:

>100_bases
AATGGCCAACCTGACCAACGACCTCGACGGTCTGCAGGATCACGGCCAGGACGACGACGGCGAGAATGAATAAGCGCTTC
CTCGCGCAAAGGCTTTTCCC

Downstream 100 bases:

>100_bases
TTCGGCGTCTGCTGTTCGCTTTACCTTTTTCGCTTCGCTTCAAGATGGACGCCCACCGCCTAAACACAGCCGCCCGGCTG
GCCAATATCCGCGCCTTTCA

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MTQDNSQAKAKAPAKSARRRARELALQGLYQWLLNRNDPGVVEAHLQDAQGFNKADRAHFDALLHGAIREETTLTEAFTP
YLDRPVAELSPVERAALLVGAYELVHCVDIPYKVVINEAVELTKTFGGVEGYKYVNGVLDKLATQVRAVEVAARR

Sequences:

>Translated_155_residues
MTQDNSQAKAKAPAKSARRRARELALQGLYQWLLNRNDPGVVEAHLQDAQGFNKADRAHFDALLHGAIREETTLTEAFTP
YLDRPVAELSPVERAALLVGAYELVHCVDIPYKVVINEAVELTKTFGGVEGYKYVNGVLDKLATQVRAVEVAARR
>Mature_154_residues
TQDNSQAKAKAPAKSARRRARELALQGLYQWLLNRNDPGVVEAHLQDAQGFNKADRAHFDALLHGAIREETTLTEAFTPY
LDRPVAELSPVERAALLVGAYELVHCVDIPYKVVINEAVELTKTFGGVEGYKYVNGVLDKLATQVRAVEVAARR

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

Organism=Escherichia coli, GI1786618, Length=125, Percent_Identity=44, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_RALPJ (B2U7E9)

Other databases:

- EMBL:   CP001068
- RefSeq:   YP_001898243.1
- ProteinModelPortal:   B2U7E9
- SMR:   B2U7E9
- GeneID:   6288300
- GenomeReviews:   CP001068_GR
- KEGG:   rpi:Rpic_0660
- HOGENOM:   HBG734409
- OMA:   IPYKVVI
- ProtClustDB:   PRK00202
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 17157; Mature: 17025

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQDNSQAKAKAPAKSARRRARELALQGLYQWLLNRNDPGVVEAHLQDAQGFNKADRAHF
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHH
DALLHGAIREETTLTEAFTPYLDRPVAELSPVERAALLVGAYELVHCVDIPYKVVINEAV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ELTKTFGGVEGYKYVNGVLDKLATQVRAVEVAARR
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQDNSQAKAKAPAKSARRRARELALQGLYQWLLNRNDPGVVEAHLQDAQGFNKADRAHF
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHH
DALLHGAIREETTLTEAFTPYLDRPVAELSPVERAALLVGAYELVHCVDIPYKVVINEAV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ELTKTFGGVEGYKYVNGVLDKLATQVRAVEVAARR
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA