Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927585
Identifier: 187927585
GI number: 187927585
Start: 518601
End: 519041
Strand: Reverse
Name: 187927585
Synonym: Rpic_0485
Alternate gene names: NA
Gene position: 519041-518601 (Counterclockwise)
Preceding gene: 187927586
Following gene: 187927584
Centisome position: 13.17
GC content: 63.49
Gene sequence:
>441_bases ATGCCACGATTTGCCCGCCTGTTCGAAGCCGCCGAGGACATCCTCGAAGCCTATCGCGATGCGCTCAAGCGCCGCGATGC CGATGGCGCGCTCAAGCTGTGGCTCGACGAGGATTCGGTGAGCTTCATCCTGCCCGACGGCCAGCGCCTGCACGGCCACG AGCAGCTGCGCGGCTGCCTCGATGCGCTGGTCGAGAAGAATCCGGTCTGGATCGAATGCCTCTCGCAACAGGTGCATTCG TCGCTGGGTGTGTCGATTTTCGAAGCCACGGAAGCGCTGCGCTTTTCGGCCACCGCCACCGAGGCCGATCTGTACGTGCA TACGACCTACGTGCTGATGCAGAACCACGAAGGCTGGCGCATCGCCCACGTCCATTCCAGCCAGGCCGCTGAAGAACGCG TGGCCGCCTCCATCGCCAGCGTTACGCACTCTCTGCACTAA
Upstream 100 bases:
>100_bases CACTTGCGCTGCCTGCGCGACATCGGCCCCGAGATGGTGTTTCATGAATTGCGCCGGCTGCTGCAGCCGCAGTAGTACGC TGTCCTTAACGTTCACCGCC
Downstream 100 bases:
>100_bases GCTGCCGCGCTGGGCGTGGCAGCCGTCTCGATCGATGACCCACCCGTCTCGCCACGCCACTCCCTTTGAACTGAATCTGG GCGCCCTGCTCGCAGGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPRFARLFEAAEDILEAYRDALKRRDADGALKLWLDEDSVSFILPDGQRLHGHEQLRGCLDALVEKNPVWIECLSQQVHS SLGVSIFEATEALRFSATATEADLYVHTTYVLMQNHEGWRIAHVHSSQAAEERVAASIASVTHSLH
Sequences:
>Translated_146_residues MPRFARLFEAAEDILEAYRDALKRRDADGALKLWLDEDSVSFILPDGQRLHGHEQLRGCLDALVEKNPVWIECLSQQVHS SLGVSIFEATEALRFSATATEADLYVHTTYVLMQNHEGWRIAHVHSSQAAEERVAASIASVTHSLH >Mature_145_residues PRFARLFEAAEDILEAYRDALKRRDADGALKLWLDEDSVSFILPDGQRLHGHEQLRGCLDALVEKNPVWIECLSQQVHSS LGVSIFEATEALRFSATATEADLYVHTTYVLMQNHEGWRIAHVHSSQAAEERVAASIASVTHSLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16393; Mature: 16261
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRFARLFEAAEDILEAYRDALKRRDADGALKLWLDEDSVSFILPDGQRLHGHEQLRGCL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHH DALVEKNPVWIECLSQQVHSSLGVSIFEATEALRFSATATEADLYVHTTYVLMQNHEGWR HHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEE IAHVHSSQAAEERVAASIASVTHSLH EEEECCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PRFARLFEAAEDILEAYRDALKRRDADGALKLWLDEDSVSFILPDGQRLHGHEQLRGCL CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHH DALVEKNPVWIECLSQQVHSSLGVSIFEATEALRFSATATEADLYVHTTYVLMQNHEGWR HHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCEE IAHVHSSQAAEERVAASIASVTHSLH EEEECCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA