Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is yheT [H]
Identifier: 187927584
GI number: 187927584
Start: 517490
End: 518566
Strand: Reverse
Name: yheT [H]
Synonym: Rpic_0484
Alternate gene names: 187927584
Gene position: 518566-517490 (Counterclockwise)
Preceding gene: 187927585
Following gene: 187927583
Centisome position: 13.15
GC content: 66.85
Gene sequence:
>1077_bases ATGACCCACCCGTCTCGCCACGCCACTCCCTTTGAACTGAATCTGGGCGCCCTGCTCGCAGGGCCGTTCGAGCCGCACGC GTTCCGTTCGCCGTGGTGGCTGATCGGCGGCAATGCACAGACGATCGTGCCCGCGCGCCTATGGCGCTTTCCGCGCATTG CGTATCGGCGCGAACGCTGGGACACGCCCGACCACGACTTCATCGACCTCGACTGGACCACGCACGAGACCGACGCGCAC GCACCGCTCGTCGTCATGTTTCATGGCTTGGAGGGCGATTCGCGCAGCCATTACGCGCGGCTGCTGATGGACGCGCTGCG CGCGCGCCGCTGGCAAGGCGTCATTCCGCACTTTCGCGGGTGTTCGGGCGAGATGAACCTCGCGCCGCGCATGTACCACT GCGGCGATGGCGCCGAGATCGCGTGGATCCTCGAACGCCTTTACCGGACGGTTTGCCAGCCGCAGAGCCGCAAGCTGCTG GTTGTCGGCATCTCGCTGGGCGGCAACGCGCTGCTGCGCTACCTGGGCGAGCACGGCACCGATGCCCGCTACGTGAGCGC CGCGGCGACGGTCTCCGCGCCACTGGACATGCGGGCCGGCGGCGCAGCGTTGTCCAAGGGCTTCAACATGGTCTACACGC GCATGTTCCTGCGCACGCTCAAAGACAAGGCCAACGCCAAGCTCGACCAGCATCCCGGCCTGTACGACCGCGCCGCCATG ATGGCCACGCGCACGCTGGGGCAATTCGACAACCTCGTCACCGCGCCGCTGCACGGTTTTCGTGACGTGCTCGACTACTG GACGCGCGCCTCGTCCAAACCCGTGCTTCGCGAGGTTCGCGTGCCGGTGCTGGTGCTGAACGCGCGCAACGATCCGTTCC TGCCCGGACAGCATCTGCCCGGCATGGCCGACGTGTCCCCCGACATCACGCTGGACCAACCGTTGCACGGCGGCCATGTC GGCTTCCTGCTGCGTCATGGCAAGACGGGCCGCGTCGATTGGATGCCCGCACGGGTCCTGCGCTTTTTCGATGATGTACT GGGCCACCAAGCCAACGCGGAGGACGCTCATGGATGA
Upstream 100 bases:
>100_bases TCCAGCCAGGCCGCTGAAGAACGCGTGGCCGCCTCCATCGCCAGCGTTACGCACTCTCTGCACTAAGCTGCCGCGCTGGG CGTGGCAGCCGTCTCGATCG
Downstream 100 bases:
>100_bases CATCGTCCGCCAAGCGATGGCCAAGTGGCCGAACGTGCCGAATTGCTTTGGCTGGCTGGCGCTGGATCGGCGCGGCCAAT GGCGCATGCGCAACGAATAT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTHPSRHATPFELNLGALLAGPFEPHAFRSPWWLIGGNAQTIVPARLWRFPRIAYRRERWDTPDHDFIDLDWTTHETDAH APLVVMFHGLEGDSRSHYARLLMDALRARRWQGVIPHFRGCSGEMNLAPRMYHCGDGAEIAWILERLYRTVCQPQSRKLL VVGISLGGNALLRYLGEHGTDARYVSAAATVSAPLDMRAGGAALSKGFNMVYTRMFLRTLKDKANAKLDQHPGLYDRAAM MATRTLGQFDNLVTAPLHGFRDVLDYWTRASSKPVLREVRVPVLVLNARNDPFLPGQHLPGMADVSPDITLDQPLHGGHV GFLLRHGKTGRVDWMPARVLRFFDDVLGHQANAEDAHG
Sequences:
>Translated_358_residues MTHPSRHATPFELNLGALLAGPFEPHAFRSPWWLIGGNAQTIVPARLWRFPRIAYRRERWDTPDHDFIDLDWTTHETDAH APLVVMFHGLEGDSRSHYARLLMDALRARRWQGVIPHFRGCSGEMNLAPRMYHCGDGAEIAWILERLYRTVCQPQSRKLL VVGISLGGNALLRYLGEHGTDARYVSAAATVSAPLDMRAGGAALSKGFNMVYTRMFLRTLKDKANAKLDQHPGLYDRAAM MATRTLGQFDNLVTAPLHGFRDVLDYWTRASSKPVLREVRVPVLVLNARNDPFLPGQHLPGMADVSPDITLDQPLHGGHV GFLLRHGKTGRVDWMPARVLRFFDDVLGHQANAEDAHG >Mature_357_residues THPSRHATPFELNLGALLAGPFEPHAFRSPWWLIGGNAQTIVPARLWRFPRIAYRRERWDTPDHDFIDLDWTTHETDAHA PLVVMFHGLEGDSRSHYARLLMDALRARRWQGVIPHFRGCSGEMNLAPRMYHCGDGAEIAWILERLYRTVCQPQSRKLLV VGISLGGNALLRYLGEHGTDARYVSAAATVSAPLDMRAGGAALSKGFNMVYTRMFLRTLKDKANAKLDQHPGLYDRAAMM ATRTLGQFDNLVTAPLHGFRDVLDYWTRASSKPVLREVRVPVLVLNARNDPFLPGQHLPGMADVSPDITLDQPLHGGHVG FLLRHGKTGRVDWMPARVLRFFDDVLGHQANAEDAHG
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=310, Percent_Identity=29.3548387096774, Blast_Score=131, Evalue=9e-31, Organism=Homo sapiens, GI194578891, Length=325, Percent_Identity=28.6153846153846, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI23397659, Length=256, Percent_Identity=23.4375, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI23397661, Length=256, Percent_Identity=23.4375, Blast_Score=76, Evalue=5e-14, Organism=Escherichia coli, GI1789752, Length=287, Percent_Identity=39.0243902439024, Blast_Score=199, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17566110, Length=304, Percent_Identity=26.3157894736842, Blast_Score=104, Evalue=8e-23, Organism=Caenorhabditis elegans, GI71985405, Length=302, Percent_Identity=23.841059602649, Blast_Score=96, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6323866, Length=302, Percent_Identity=26.158940397351, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6319655, Length=292, Percent_Identity=29.7945205479452, Blast_Score=101, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6325162, Length=306, Percent_Identity=28.7581699346405, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI24652003, Length=323, Percent_Identity=29.7213622291022, Blast_Score=141, Evalue=6e-34, Organism=Drosophila melanogaster, GI281398151, Length=323, Percent_Identity=29.7213622291022, Blast_Score=141, Evalue=7e-34, Organism=Drosophila melanogaster, GI24581365, Length=325, Percent_Identity=21.2307692307692, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 40196; Mature: 40064
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPSRHATPFELNLGALLAGPFEPHAFRSPWWLIGGNAQTIVPARLWRFPRIAYRRERW CCCCCCCCCCEEECCCCEEECCCCCCCCCCCCEEECCCCCEEHHHHHHHCHHHHHHHHCC DTPDHDFIDLDWTTHETDAHAPLVVMFHGLEGDSRSHYARLLMDALRARRWQGVIPHFRG CCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC CSGEMNLAPRMYHCGDGAEIAWILERLYRTVCQPQSRKLLVVGISLGGNALLRYLGEHGT CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCC DARYVSAAATVSAPLDMRAGGAALSKGFNMVYTRMFLRTLKDKANAKLDQHPGLYDRAAM CCCEEEHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH MATRTLGQFDNLVTAPLHGFRDVLDYWTRASSKPVLREVRVPVLVLNARNDPFLPGQHLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCC GMADVSPDITLDQPLHGGHVGFLLRHGKTGRVDWMPARVLRFFDDVLGHQANAEDAHG CCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure THPSRHATPFELNLGALLAGPFEPHAFRSPWWLIGGNAQTIVPARLWRFPRIAYRRERW CCCCCCCCCEEECCCCEEECCCCCCCCCCCCEEECCCCCEEHHHHHHHCHHHHHHHHCC DTPDHDFIDLDWTTHETDAHAPLVVMFHGLEGDSRSHYARLLMDALRARRWQGVIPHFRG CCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC CSGEMNLAPRMYHCGDGAEIAWILERLYRTVCQPQSRKLLVVGISLGGNALLRYLGEHGT CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHCCCC DARYVSAAATVSAPLDMRAGGAALSKGFNMVYTRMFLRTLKDKANAKLDQHPGLYDRAAM CCCEEEHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH MATRTLGQFDNLVTAPLHGFRDVLDYWTRASSKPVLREVRVPVLVLNARNDPFLPGQHLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCC GMADVSPDITLDQPLHGGHVGFLLRHGKTGRVDWMPARVLRFFDDVLGHQANAEDAHG CCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]