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The map label for this gene is prrC [H]

Identifier: 187927549

GI number: 187927549

Start: 481909

End: 483009

Strand: Direct

Name: prrC [H]

Synonym: Rpic_0449

Alternate gene names: 187927549

Gene position: 481909-483009 (Clockwise)

Preceding gene: 187927548

Following gene: 187927550

Centisome position: 12.22

GC content: 56.22

Gene sequence:

>1101_bases
ATGAAACCGGGCCAAGCTTTCACCGACCTGCCCGCGTTGGCCGCGCAGCTGCGGCAGGAACTGGAGAACAAGAAAACCAT
CCTGCTCTACGCCTACAATGGCACCGGCAAGACGCGGCTATCGATGGCATTCAAAGACATCGGCAAGCAGGGCGATGCCC
GCGACACGCTCTACTTCAACGCCTTCACCGAAGACCTGTTCCACTGGGACAACGACCTGGACGGCGACAGTGACCGCCAG
CTCACGCTCAACGCGGCCTCGCGCTTCTTTGTCGGCTTGGCCGAGCTGGAAATGGACAACCGCATCCGCCCGCTGCTGCA
ACGCTACGCGGATTTCGATTTCCGCATCGATACGCAGGAATGGGTTGTGCGCTTCTCGCGCACACTGGACGGTCAGATCA
TTGACAACATCAAAGTGTCGCGCGGCGAGGAAAACATCTTTGTCTGGTGCTTCTTTCTTGCCATCGTCCAGTTGGTGCTG
GATGGTGCTGAGGCTTACCGGTGGGTGAAATACATCTACATCGACGACCCGATTTCGTCGCTGGATGAGCACAACGCGAT
TGCCGTGGCTAACCACTTGGCGCAACTGCTCAAGCGGCCCGAAAGCAAGCTCAAGACCGTGATCTCCACGCACCACACTT
TGTTCTTCAATGTGTTGTGCAACGAGTTGGGCAAGGCCCGGAAGTATTTCGTCAACAAGAACTCAACAGGTAGTGGCTAC
GTGTTGCGTGAGGAAATGGGCGATACGCCGTTCTTTCACCACGTCGCCGCCTTGGCGGAGCTGTATCAGGCTGCGCAGGA
AGATCGGCTCTTCACCCATCACTTCAACATGCTGCGCACCATTCTGGAGAAGACGGCGAGCTTTCACGGCCACAAGAACT
TCTCGGCCTGCATCAAGCAAGAAGACGATGACCCGGATGGCGTCTTGCACACACGCCTGATCAACATCCTGAGCCACGGC
AACTATTCACTGTTCGAGCCCCAGCAGATGCTGGACGAGAACAAGGCTTACTTCAGGAAGATCCTGCACGACTTCCTGAA
TCGCTATCCCTTCAATCCAGATCTATTTCCTCAAGCCGTTGAGGAAGCAGGCACCCAATGA

Upstream 100 bases:

>100_bases
ATGGGTTGATCACTACTCAACGCCAGAAGATCGACGCCCTTGAGATCCACAAGAAGGGCTTGATGCAGCAGCTTTTCCCG
GTCATGGCTGAGGCGCTGGC

Downstream 100 bases:

>100_bases
CCGATCTCGAAAAACAAAAGCTGGGCAAGACCCTCTGGGCCATTGCAGACCAACTGCGCGGCGCAATGAATGCGGACGAT
TTCCGCGACTACATGCTGGC

Product: anticodon nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKPGQAFTDLPALAAQLRQELENKKTILLYAYNGTGKTRLSMAFKDIGKQGDARDTLYFNAFTEDLFHWDNDLDGDSDRQ
LTLNAASRFFVGLAELEMDNRIRPLLQRYADFDFRIDTQEWVVRFSRTLDGQIIDNIKVSRGEENIFVWCFFLAIVQLVL
DGAEAYRWVKYIYIDDPISSLDEHNAIAVANHLAQLLKRPESKLKTVISTHHTLFFNVLCNELGKARKYFVNKNSTGSGY
VLREEMGDTPFFHHVAALAELYQAAQEDRLFTHHFNMLRTILEKTASFHGHKNFSACIKQEDDDPDGVLHTRLINILSHG
NYSLFEPQQMLDENKAYFRKILHDFLNRYPFNPDLFPQAVEEAGTQ

Sequences:

>Translated_366_residues
MKPGQAFTDLPALAAQLRQELENKKTILLYAYNGTGKTRLSMAFKDIGKQGDARDTLYFNAFTEDLFHWDNDLDGDSDRQ
LTLNAASRFFVGLAELEMDNRIRPLLQRYADFDFRIDTQEWVVRFSRTLDGQIIDNIKVSRGEENIFVWCFFLAIVQLVL
DGAEAYRWVKYIYIDDPISSLDEHNAIAVANHLAQLLKRPESKLKTVISTHHTLFFNVLCNELGKARKYFVNKNSTGSGY
VLREEMGDTPFFHHVAALAELYQAAQEDRLFTHHFNMLRTILEKTASFHGHKNFSACIKQEDDDPDGVLHTRLINILSHG
NYSLFEPQQMLDENKAYFRKILHDFLNRYPFNPDLFPQAVEEAGTQ
>Mature_366_residues
MKPGQAFTDLPALAAQLRQELENKKTILLYAYNGTGKTRLSMAFKDIGKQGDARDTLYFNAFTEDLFHWDNDLDGDSDRQ
LTLNAASRFFVGLAELEMDNRIRPLLQRYADFDFRIDTQEWVVRFSRTLDGQIIDNIKVSRGEENIFVWCFFLAIVQLVL
DGAEAYRWVKYIYIDDPISSLDEHNAIAVANHLAQLLKRPESKLKTVISTHHTLFFNVLCNELGKARKYFVNKNSTGSGY
VLREEMGDTPFFHHVAALAELYQAAQEDRLFTHHFNMLRTILEKTASFHGHKNFSACIKQEDDDPDGVLHTRLINILSHG
NYSLFEPQQMLDENKAYFRKILHDFLNRYPFNPDLFPQAVEEAGTQ

Specific function: Anticodon nuclease triggers the cleavage ligation of tRNA(Lys). It is activated by T4 stp protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42286; Mature: 42286

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPGQAFTDLPALAAQLRQELENKKTILLYAYNGTGKTRLSMAFKDIGKQGDARDTLYFN
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEH
AFTEDLFHWDNDLDGDSDRQLTLNAASRFFVGLAELEMDNRIRPLLQRYADFDFRIDTQE
HHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECHHH
WVVRFSRTLDGQIIDNIKVSRGEENIFVWCFFLAIVQLVLDGAEAYRWVKYIYIDDPISS
HHHHHHHHCCCHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHH
LDEHNAIAVANHLAQLLKRPESKLKTVISTHHTLFFNVLCNELGKARKYFVNKNSTGSGY
HHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
VLREEMGDTPFFHHVAALAELYQAAQEDRLFTHHFNMLRTILEKTASFHGHKNFSACIKQ
EEHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
EDDDPDGVLHTRLINILSHGNYSLFEPQQMLDENKAYFRKILHDFLNRYPFNPDLFPQAV
CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHH
EEAGTQ
HHCCCC
>Mature Secondary Structure
MKPGQAFTDLPALAAQLRQELENKKTILLYAYNGTGKTRLSMAFKDIGKQGDARDTLYFN
CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEH
AFTEDLFHWDNDLDGDSDRQLTLNAASRFFVGLAELEMDNRIRPLLQRYADFDFRIDTQE
HHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECHHH
WVVRFSRTLDGQIIDNIKVSRGEENIFVWCFFLAIVQLVLDGAEAYRWVKYIYIDDPISS
HHHHHHHHCCCHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHH
LDEHNAIAVANHLAQLLKRPESKLKTVISTHHTLFFNVLCNELGKARKYFVNKNSTGSGY
HHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
VLREEMGDTPFFHHVAALAELYQAAQEDRLFTHHFNMLRTILEKTASFHGHKNFSACIKQ
EEHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
EDDDPDGVLHTRLINILSHGNYSLFEPQQMLDENKAYFRKILHDFLNRYPFNPDLFPQAV
CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHH
EEAGTQ
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1691706 [H]