Click here to switch to the map view.

The map label for this gene is glpQ [H]

Identifier: 187927481

GI number: 187927481

Start: 400908

End: 402047

Strand: Reverse

Name: glpQ [H]

Synonym: Rpic_0378

Alternate gene names: 187927481

Gene position: 402047-400908 (Counterclockwise)

Preceding gene: 187927482

Following gene: 187927480

Centisome position: 10.2

GC content: 64.47

Gene sequence:

>1140_bases
ATGCCTCGCCGCCTCATCCTGCCGAGCCTGCTGATCTTGAGTACGTCCGTCGCCCTCTACGCCTGCCGGCTGGAGTACCA
CCACGGCAGCGGTGGCGGTGGCAACACCACGCCCATCGCCACCATCCAGGTGATCGGCCATCGCGGTGCCTCCGCATTGC
GACCGGAGCACACGCTGGCCTCGTACCAGAAAGCCATCGACGACGGCGCGGACATCATCGAGCCGGATCTCGTCTCCACC
AAAGACGGCGTGCTGGTTGCGCGCCACGAGAACGAGATCTCCGGCACGACCAACGTGGCCGACGTGGCAGCGTTTGCCGG
GCGCAAGACCACCAAGACGATCGACGGCCAGAGCGTCACGGGCTGGTTCACCGAAGACTTCACGCTTGGAGAACTGAAAA
CGCTGCGCGCACGCGAGCGCATCCCGAACATCCGCCCCGACAACGTCGCCTACAACGACCAGTTCGACATCCCCACACTC
GACGAGATCATCGCGCTGGCGCGGGACCAATCCGCCAAGCTCGGCCGCAACATCGGCATCTATCCGGAGACGAAGCACCC
GACGTACTTCCAGTCGATCGGCCTGCCGCTGGAAGACCGGCTGATCGACGGCCTGCGCCGTGACGCGTTCACGGCCAGCC
GCACGACGGTCTACATCCAGTCGTTCGAGGTGGCCAATCTCAAGGCCATTCGCAACAAGATCGGCGGCAGCCAACCGAAC
TGGAAACTCGTACAGCTGATGGGCACATCCGGCCGACAGCCCTACGATTTTGTGGTCGCCAAAGACAGCCGTACCTTCGG
CGACATGATGACGAGCCAAGGCATGCGCGACATCGCCGCATACGCCAACGGCGTCGGCCCGGACAAGAGCAGCATCATGG
GCCTGGATGCGAACGGCAAGCTGACCGATCCGACCGACCTGATCCGCAACGCGCACAACGCCGGGCTGGTGGTCCATCCA
TATACGTTCCGCCCCGAGAACACCTTCCTGCCGCCGTCGCTGCGCAGCGGTGCGGACAACACGCGCAACGTCAACGGCTC
GATCACGGAGATCCAGGCGTTCCTGCGCGCGGGCGTCGATGGCTTCTTTACCGACGATCCGGCGGTCGGGCGGCAAGCCG
TGTCGACCTTCAAGCGCTAG

Upstream 100 bases:

>100_bases
GCGCGGCCGCCTCGTCGGCTGACAGGATTCTTGAAGCCCGCAGGTAGCGGCATCCGGGCACGGCGACTACCATGCGGGTA
CCCGTATTCAGGAGCCCCCG

Downstream 100 bases:

>100_bases
TCTTCGCGCATCGGAACCGTAGCGAGCGGCCGAGCCTGGATCGGGCCGCGCAGTAGGTTTGGGCTACACTGCGTCCCGTT
TTGGAGGAGGAACCCCACCC

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MPRRLILPSLLILSTSVALYACRLEYHHGSGGGGNTTPIATIQVIGHRGASALRPEHTLASYQKAIDDGADIIEPDLVST
KDGVLVARHENEISGTTNVADVAAFAGRKTTKTIDGQSVTGWFTEDFTLGELKTLRARERIPNIRPDNVAYNDQFDIPTL
DEIIALARDQSAKLGRNIGIYPETKHPTYFQSIGLPLEDRLIDGLRRDAFTASRTTVYIQSFEVANLKAIRNKIGGSQPN
WKLVQLMGTSGRQPYDFVVAKDSRTFGDMMTSQGMRDIAAYANGVGPDKSSIMGLDANGKLTDPTDLIRNAHNAGLVVHP
YTFRPENTFLPPSLRSGADNTRNVNGSITEIQAFLRAGVDGFFTDDPAVGRQAVSTFKR

Sequences:

>Translated_379_residues
MPRRLILPSLLILSTSVALYACRLEYHHGSGGGGNTTPIATIQVIGHRGASALRPEHTLASYQKAIDDGADIIEPDLVST
KDGVLVARHENEISGTTNVADVAAFAGRKTTKTIDGQSVTGWFTEDFTLGELKTLRARERIPNIRPDNVAYNDQFDIPTL
DEIIALARDQSAKLGRNIGIYPETKHPTYFQSIGLPLEDRLIDGLRRDAFTASRTTVYIQSFEVANLKAIRNKIGGSQPN
WKLVQLMGTSGRQPYDFVVAKDSRTFGDMMTSQGMRDIAAYANGVGPDKSSIMGLDANGKLTDPTDLIRNAHNAGLVVHP
YTFRPENTFLPPSLRSGADNTRNVNGSITEIQAFLRAGVDGFFTDDPAVGRQAVSTFKR
>Mature_378_residues
PRRLILPSLLILSTSVALYACRLEYHHGSGGGGNTTPIATIQVIGHRGASALRPEHTLASYQKAIDDGADIIEPDLVSTK
DGVLVARHENEISGTTNVADVAAFAGRKTTKTIDGQSVTGWFTEDFTLGELKTLRARERIPNIRPDNVAYNDQFDIPTLD
EIIALARDQSAKLGRNIGIYPETKHPTYFQSIGLPLEDRLIDGLRRDAFTASRTTVYIQSFEVANLKAIRNKIGGSQPNW
KLVQLMGTSGRQPYDFVVAKDSRTFGDMMTSQGMRDIAAYANGVGPDKSSIMGLDANGKLTDPTDLIRNAHNAGLVVHPY
TFRPENTFLPPSLRSGADNTRNVNGSITEIQAFLRAGVDGFFTDDPAVGRQAVSTFKR

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1788572, Length=348, Percent_Identity=32.183908045977, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 41317; Mature: 41186

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRLILPSLLILSTSVALYACRLEYHHGSGGGGNTTPIATIQVIGHRGASALRPEHTLA
CCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHH
SYQKAIDDGADIIEPDLVSTKDGVLVARHENEISGTTNVADVAAFAGRKTTKTIDGQSVT
HHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCEECCCCCEE
GWFTEDFTLGELKTLRARERIPNIRPDNVAYNDQFDIPTLDEIIALARDQSAKLGRNIGI
EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCC
YPETKHPTYFQSIGLPLEDRLIDGLRRDAFTASRTTVYIQSFEVANLKAIRNKIGGSQPN
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCCCCCC
WKLVQLMGTSGRQPYDFVVAKDSRTFGDMMTSQGMRDIAAYANGVGPDKSSIMGLDANGK
CEEEEEECCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCHHHEEEECCCCC
LTDPTDLIRNAHNAGLVVHPYTFRPENTFLPPSLRSGADNTRNVNGSITEIQAFLRAGVD
CCCHHHHHHCCCCCCEEEECEEECCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCC
GFFTDDPAVGRQAVSTFKR
CCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PRRLILPSLLILSTSVALYACRLEYHHGSGGGGNTTPIATIQVIGHRGASALRPEHTLA
CCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHH
SYQKAIDDGADIIEPDLVSTKDGVLVARHENEISGTTNVADVAAFAGRKTTKTIDGQSVT
HHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCEECCCCCEE
GWFTEDFTLGELKTLRARERIPNIRPDNVAYNDQFDIPTLDEIIALARDQSAKLGRNIGI
EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCC
YPETKHPTYFQSIGLPLEDRLIDGLRRDAFTASRTTVYIQSFEVANLKAIRNKIGGSQPN
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCCCCCC
WKLVQLMGTSGRQPYDFVVAKDSRTFGDMMTSQGMRDIAAYANGVGPDKSSIMGLDANGK
CEEEEEECCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCHHHEEEECCCCC
LTDPTDLIRNAHNAGLVVHPYTFRPENTFLPPSLRSGADNTRNVNGSITEIQAFLRAGVD
CCCHHHHHHCCCCCCEEEECEEECCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCC
GFFTDDPAVGRQAVSTFKR
CCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1851953; 9205837; 9278503; 3329281; 8899705 [H]