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The map label for this gene is 187927160

Identifier: 187927160

GI number: 187927160

Start: 62496

End: 62894

Strand: Direct

Name: 187927160

Synonym: Rpic_0050

Alternate gene names: NA

Gene position: 62496-62894 (Clockwise)

Preceding gene: 187927159

Following gene: 187927163

Centisome position: 1.59

GC content: 60.4

Gene sequence:

>399_bases
ATGCTTTCCCTGCTATCCCACCCGCGCCTGTCGCACTGCCGCCGCATGTTCCTGCGCAACTACGAAGTGCAGATCAACAT
CGGCGTGCATGAATTCGAGAAGAAGGGCGAGCAGCGCGTCCTGATCAACATCGAGCTGTACGTGCCGCTGGAGCATTCGT
CGCCCACGGAAGACAAGCTGCATGAAGTGGTGGATTACGACTTCATGCGCGAGACCGTGGCGCGGCGCATGGCGCAAGGC
CATATCCATCTGCAGGAGACGCTGTGCGATGACGTGCTGGCGGCGATGCTCAAGCACCCGCATGTGCTGGCCGCGCGGGT
GTCGACGGAGAAGCCGGATGTGTATCCGGATTGTGAGTCGGTGGGGGTGGAGGTGTTTCGGATCAAGGAACAGGCTTAA

Upstream 100 bases:

>100_bases
CGGCACCACGCTGTTCGTCGACGGAGGCCAGCACCTGATGCCGCTGGCACGCGACGTGATGTTCCTGACTGAATAAACAA
CTCCTCCCCCGGACGCTCCC

Downstream 100 bases:

>100_bases
GCGCTTGTTCTTCTCTGCACCACCGGCGTTTGTGGTGCATCCCTTGTTTCGTCCCTTACCGGGGCTGACTCACTTTCTTT
GTCTTGCCAAAGAAAGTAAG

Product: hypothetical protein

Products: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine; glycolaldehyde

Alternate protein names: Dihydroneopterin Aldolase Family Protein; Dihydroneopterin Aldolase Protein

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MLSLLSHPRLSHCRRMFLRNYEVQINIGVHEFEKKGEQRVLINIELYVPLEHSSPTEDKLHEVVDYDFMRETVARRMAQG
HIHLQETLCDDVLAAMLKHPHVLAARVSTEKPDVYPDCESVGVEVFRIKEQA

Sequences:

>Translated_132_residues
MLSLLSHPRLSHCRRMFLRNYEVQINIGVHEFEKKGEQRVLINIELYVPLEHSSPTEDKLHEVVDYDFMRETVARRMAQG
HIHLQETLCDDVLAAMLKHPHVLAARVSTEKPDVYPDCESVGVEVFRIKEQA
>Mature_132_residues
MLSLLSHPRLSHCRRMFLRNYEVQINIGVHEFEKKGEQRVLINIELYVPLEHSSPTEDKLHEVVDYDFMRETVARRMAQG
HIHLQETLCDDVLAAMLKHPHVLAARVSTEKPDVYPDCESVGVEVFRIKEQA

Specific function: Unknown

COG id: COG1539

COG function: function code H; Dihydroneopterin aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.1.2.25

Molecular weight: Translated: 15360; Mature: 15360

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLLSHPRLSHCRRMFLRNYEVQINIGVHEFEKKGEQRVLINIELYVPLEHSSPTEDKL
CCCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHCCCCCEEEEEEEEEEEECCCCCCHHHH
HEVVDYDFMRETVARRMAQGHIHLQETLCDDVLAAMLKHPHVLAARVSTEKPDVYPDCES
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH
VGVEVFRIKEQA
CCEEEEEEECCC
>Mature Secondary Structure
MLSLLSHPRLSHCRRMFLRNYEVQINIGVHEFEKKGEQRVLINIELYVPLEHSSPTEDKL
CCCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHCCCCCEEEEEEEEEEEECCCCCCHHHH
HEVVDYDFMRETVARRMAQGHIHLQETLCDDVLAAMLKHPHVLAARVSTEKPDVYPDCES
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH
VGVEVFRIKEQA
CCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-; $dihydropteridine

Specific reaction: 2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8- $dihydropteridine = 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + glycolaldehyde

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA