Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

Click here to switch to the map view.

The map label for this gene is 187918589

Identifier: 187918589

GI number: 187918589

Start: 782924

End: 784036

Strand: Direct

Name: 187918589

Synonym: BH0733A

Alternate gene names: NA

Gene position: 782924-784036 (Clockwise)

Preceding gene: 187918588

Following gene: 187918591

Centisome position: 84.89

GC content: 30.01

Gene sequence:

>1113_bases
ATGATTATTTTAATTAGGGGATTTATGCTTAAAAATATTGTTTATATTTCTCTTCCAGAAGATTTTACAAGTCAAATTAA
AGATTTTATATTTGATCCTAAGATACTTTTACCTGTCGAGGTTGGTGATGTTCAACATTTTTCTCAAGATGAACTTAATT
TTGAGGCTGTTATGTCTGCAATTCTTAAGATCTCAGCTTATGATCAAGGTAATGTTAATTTCCCTTATTATAAAAAGCTT
CTATTAGCTTTAAATCCGAATATTGTTAATATGCTTATTCATGTTGGACTTACTAAGATTGATGAGGGCGATTACAACTT
GGCTCTTGAGATTTTTTTGGCATTAAAAGGTATTGATGGTGAGAATGAGGTTCTTCTTTCTAATTTGGCATTATTATATG
AGAAAATGGCTGAAAACTTCTTAAGGGTTGATCAAAATGTAGAGGCTATGACTAGTAATCAAAATGCTTTAAAGATTTAT
GAGAGACTTTTAGAACTTGAAAGTCCAAATGAAAATGTGTTTGCAAATGCTGGTTTTTTCTTTGTTAAACAATACAAATT
AGACAGGGCACAAGAATTGCTTAGGCATTATTTGAGAATTTCTAATAATTTAAAATTAAAAAGTAAGGTAAGTGAGGTTT
TAGATGCTATAGGAGTTCATAAAAGTTTAGCCTTAAATCTTGAGAGAATATATGATTTGATAATTTTATCAAAGGAAGAT
GAAGCTATTTCTGAACTTGTTAAACTTTTAGAATATCATGAAGGTTCTTGGAATGCTTGGTTCTTGCTTGGATGGGGATA
TAGAAGAAAGGGGTTTTACTCTGAGGCAAAAGATGCTTTTCTTAAAGTTTTGTCTATTGATTCTAAGAATGTCGATGCTA
TGAACGAGCTTGCAATCTGTTTTATGGAACTTGTTGAGTTTAATGATAGTCTTGAGTATTTACTTAAAGCTTTAAAGCTT
GAACCTGATAATATCAAAATTATTTCAAATCTTGGAATTCTTCATTTAAAGATGGAGCGCAGTAAAGAGGCTAGAGAATA
TTTTGAAATAGTTCTTGAATATGATTCAAGTGATCCTATTGCCCTTAAATATTTGGAACTATTGGATAGTTAA

Upstream 100 bases:

>100_bases
AGAAATTTGAGTGTTATTCAAACTCCTAATGGTAAGGTTTTAGCTTTAGGTGTTGCATTCTGCGAGGAAAAGATTCCCCT
TGCTTATACTATGTTAATCC

Downstream 100 bases:

>100_bases
ATTTAATGTATATGTTGTATTGCTTTTAAAAAATAAATTTATTCAGACTGGCTTTCTTAAGTCTATTATTAATTGAGTAT
CCAAGTTGATTGTTATCCAC

Product: tetratricopeptide repeat family protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Protein; Tetratricopeptide Repeat Family Protein; TPR Domain Protein

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MIILIRGFMLKNIVYISLPEDFTSQIKDFIFDPKILLPVEVGDVQHFSQDELNFEAVMSAILKISAYDQGNVNFPYYKKL
LLALNPNIVNMLIHVGLTKIDEGDYNLALEIFLALKGIDGENEVLLSNLALLYEKMAENFLRVDQNVEAMTSNQNALKIY
ERLLELESPNENVFANAGFFFVKQYKLDRAQELLRHYLRISNNLKLKSKVSEVLDAIGVHKSLALNLERIYDLIILSKED
EAISELVKLLEYHEGSWNAWFLLGWGYRRKGFYSEAKDAFLKVLSIDSKNVDAMNELAICFMELVEFNDSLEYLLKALKL
EPDNIKIISNLGILHLKMERSKEAREYFEIVLEYDSSDPIALKYLELLDS

Sequences:

>Translated_370_residues
MIILIRGFMLKNIVYISLPEDFTSQIKDFIFDPKILLPVEVGDVQHFSQDELNFEAVMSAILKISAYDQGNVNFPYYKKL
LLALNPNIVNMLIHVGLTKIDEGDYNLALEIFLALKGIDGENEVLLSNLALLYEKMAENFLRVDQNVEAMTSNQNALKIY
ERLLELESPNENVFANAGFFFVKQYKLDRAQELLRHYLRISNNLKLKSKVSEVLDAIGVHKSLALNLERIYDLIILSKED
EAISELVKLLEYHEGSWNAWFLLGWGYRRKGFYSEAKDAFLKVLSIDSKNVDAMNELAICFMELVEFNDSLEYLLKALKL
EPDNIKIISNLGILHLKMERSKEAREYFEIVLEYDSSDPIALKYLELLDS
>Mature_370_residues
MIILIRGFMLKNIVYISLPEDFTSQIKDFIFDPKILLPVEVGDVQHFSQDELNFEAVMSAILKISAYDQGNVNFPYYKKL
LLALNPNIVNMLIHVGLTKIDEGDYNLALEIFLALKGIDGENEVLLSNLALLYEKMAENFLRVDQNVEAMTSNQNALKIY
ERLLELESPNENVFANAGFFFVKQYKLDRAQELLRHYLRISNNLKLKSKVSEVLDAIGVHKSLALNLERIYDLIILSKED
EAISELVKLLEYHEGSWNAWFLLGWGYRRKGFYSEAKDAFLKVLSIDSKNVDAMNELAICFMELVEFNDSLEYLLKALKL
EPDNIKIISNLGILHLKMERSKEAREYFEIVLEYDSSDPIALKYLELLDS

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42658; Mature: 42658

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILIRGFMLKNIVYISLPEDFTSQIKDFIFDPKILLPVEVGDVQHFSQDELNFEAVMSA
CEEEEECHHHHCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
ILKISAYDQGNVNFPYYKKLLLALNPNIVNMLIHVGLTKIDEGDYNLALEIFLALKGIDG
HHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCHHHEEEEEHHCCCCC
ENEVLLSNLALLYEKMAENFLRVDQNVEAMTSNQNALKIYERLLELESPNENVFANAGFF
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCEE
FVKQYKLDRAQELLRHYLRISNNLKLKSKVSEVLDAIGVHKSLALNLERIYDLIILSKED
EEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCC
EAISELVKLLEYHEGSWNAWFLLGWGYRRKGFYSEAKDAFLKVLSIDSKNVDAMNELAIC
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
FMELVEFNDSLEYLLKALKLEPDNIKIISNLGILHLKMERSKEAREYFEIVLEYDSSDPI
HHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHHEEECCCCCH
ALKYLELLDS
HHHHHHHHCC
>Mature Secondary Structure
MIILIRGFMLKNIVYISLPEDFTSQIKDFIFDPKILLPVEVGDVQHFSQDELNFEAVMSA
CEEEEECHHHHCEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
ILKISAYDQGNVNFPYYKKLLLALNPNIVNMLIHVGLTKIDEGDYNLALEIFLALKGIDG
HHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCHHHEEEEEHHCCCCC
ENEVLLSNLALLYEKMAENFLRVDQNVEAMTSNQNALKIYERLLELESPNENVFANAGFF
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCEE
FVKQYKLDRAQELLRHYLRISNNLKLKSKVSEVLDAIGVHKSLALNLERIYDLIILSKED
EEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCC
EAISELVKLLEYHEGSWNAWFLLGWGYRRKGFYSEAKDAFLKVLSIDSKNVDAMNELAIC
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
FMELVEFNDSLEYLLKALKLEPDNIKIISNLGILHLKMERSKEAREYFEIVLEYDSSDPI
HHHHHHCCCHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHHHHHHHHHHHEEECCCCCH
ALKYLELLDS
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA