Definition | Borrelia hermsii DAH chromosome, complete genome. |
---|---|
Accession | NC_010673 |
Length | 922,307 |
Click here to switch to the map view.
The map label for this gene is 187918588
Identifier: 187918588
GI number: 187918588
Start: 782155
End: 782940
Strand: Direct
Name: 187918588
Synonym: BH0733
Alternate gene names: NA
Gene position: 782155-782940 (Clockwise)
Preceding gene: 187918582
Following gene: 187918589
Centisome position: 84.8
GC content: 30.66
Gene sequence:
>786_bases ATGTTTTTGTCTCGAAAAATAAAAGATTATGAAGTTAAGTATAAGGGTAAAGAAATTAAGATGAGTACTGAAATCAACAG TTTCCTTAATATTAGAAATTCTGTTGAAATGAGAGTTGGTACTTATGTAGCAAGTGGTGTAATCTATTCTATTTCTATGA GTGCTATTAAGCTTATTTTACAGGATGATAAAGTTTTACCTGTTTTGGCACAAAATGGAAATTCAGGCAATATTCAGCTT AAGAGCTTTGATAATGTTGGTGATAATTCTTTTTTTATTCCTTCTTTAGTCGTTAAGTTGGTAAATACATCTTCTTATTC CGTTCAAGATAAGGAGTATAATTTGCTGACTCTAGATTTTTTATCTCCCCTCTCAGAAGAGGTTGCAGTTAAAATTGGCA AATTGCTTGATTTGAAGCTTGGACAGAATCAAAGAATTCATGAGCGTATTATTATTGATAAGGATTCAATTAGAAAACTT AATCTTAGTTCTGATAAAGCTTTTATTAAAGTTAATGGCGTTAAGCATAAATGCTTGATTAAAGATATGTCTTATGGAGG TGCACTTTTAATATCTTATTTTGATTATGAGGGAATGGATGAGAGTAATCCTGATTTAACTTTAAGTTTTGATATTGCAG ACAAGGAAGTATCTATTGTGGGTAAGGCAAGAAATTTGAGTGTTATTCAAACTCCTAATGGTAAGGTTTTAGCTTTAGGT GTTGCATTCTGCGAGGAAAAGATTCCCCTTGCTTATACTATGTTAATCCATGATTATTTTAATTAG
Upstream 100 bases:
>100_bases TTTTAAAGTGTATGCATAACTTAAAATTTTTGAATTTTATTGCTTTAATTTTCCTGAATATCAATTTCAACATGTTTGTT AGATTTCAAAGGAGAGGTTT
Downstream 100 bases:
>100_bases GGGATTTATGCTTAAAAATATTGTTTATATTTCTCTTCCAGAAGATTTTACAAGTCAAATTAAAGATTTTATATTTGATC CTAAGATACTTTTACCTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MFLSRKIKDYEVKYKGKEIKMSTEINSFLNIRNSVEMRVGTYVASGVIYSISMSAIKLILQDDKVLPVLAQNGNSGNIQL KSFDNVGDNSFFIPSLVVKLVNTSSYSVQDKEYNLLTLDFLSPLSEEVAVKIGKLLDLKLGQNQRIHERIIIDKDSIRKL NLSSDKAFIKVNGVKHKCLIKDMSYGGALLISYFDYEGMDESNPDLTLSFDIADKEVSIVGKARNLSVIQTPNGKVLALG VAFCEEKIPLAYTMLIHDYFN
Sequences:
>Translated_261_residues MFLSRKIKDYEVKYKGKEIKMSTEINSFLNIRNSVEMRVGTYVASGVIYSISMSAIKLILQDDKVLPVLAQNGNSGNIQL KSFDNVGDNSFFIPSLVVKLVNTSSYSVQDKEYNLLTLDFLSPLSEEVAVKIGKLLDLKLGQNQRIHERIIIDKDSIRKL NLSSDKAFIKVNGVKHKCLIKDMSYGGALLISYFDYEGMDESNPDLTLSFDIADKEVSIVGKARNLSVIQTPNGKVLALG VAFCEEKIPLAYTMLIHDYFN >Mature_261_residues MFLSRKIKDYEVKYKGKEIKMSTEINSFLNIRNSVEMRVGTYVASGVIYSISMSAIKLILQDDKVLPVLAQNGNSGNIQL KSFDNVGDNSFFIPSLVVKLVNTSSYSVQDKEYNLLTLDFLSPLSEEVAVKIGKLLDLKLGQNQRIHERIIIDKDSIRKL NLSSDKAFIKVNGVKHKCLIKDMSYGGALLISYFDYEGMDESNPDLTLSFDIADKEVSIVGKARNLSVIQTPNGKVLALG VAFCEEKIPLAYTMLIHDYFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29237; Mature: 29237
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLSRKIKDYEVKYKGKEIKMSTEINSFLNIRNSVEMRVGTYVASGVIYSISMSAIKLIL CCCCCCCCCEEEEECCCEEEEEHHHHHHHHCCCCEEEEEHEEECCCEEEEEEHHHEEEEE QDDKVLPVLAQNGNSGNIQLKSFDNVGDNSFFIPSLVVKLVNTSSYSVQDKEYNLLTLDF CCCCEEEEEEECCCCCEEEEEECCCCCCCCEEHHHHHHHHHCCCCCEEECCCCCEEEEHH LSPLSEEVAVKIGKLLDLKLGQNQRIHERIIIDKDSIRKLNLSSDKAFIKVNGVKHKCLI HCCCHHHHHHHHHHEEEEECCCCCCCCCEEEECCCCCEEECCCCCEEEEEECCCCEEEEE KDMSYGGALLISYFDYEGMDESNPDLTLSFDIADKEVSIVGKARNLSVIQTPNGKVLALG EECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCCEEEEE VAFCEEKIPLAYTMLIHDYFN EEECCCCCCEEEEEEEEHHCC >Mature Secondary Structure MFLSRKIKDYEVKYKGKEIKMSTEINSFLNIRNSVEMRVGTYVASGVIYSISMSAIKLIL CCCCCCCCCEEEEECCCEEEEEHHHHHHHHCCCCEEEEEHEEECCCEEEEEEHHHEEEEE QDDKVLPVLAQNGNSGNIQLKSFDNVGDNSFFIPSLVVKLVNTSSYSVQDKEYNLLTLDF CCCCEEEEEEECCCCCEEEEEECCCCCCCCEEHHHHHHHHHCCCCCEEECCCCCEEEEHH LSPLSEEVAVKIGKLLDLKLGQNQRIHERIIIDKDSIRKLNLSSDKAFIKVNGVKHKCLI HCCCHHHHHHHHHHEEEEECCCCCCCCCEEEECCCCCEEECCCCCEEEEEECCCCEEEEE KDMSYGGALLISYFDYEGMDESNPDLTLSFDIADKEVSIVGKARNLSVIQTPNGKVLALG EECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCCCCEEEEE VAFCEEKIPLAYTMLIHDYFN EEECCCCCCEEEEEEEEHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA