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The map label for this gene is secF [H]

Identifier: 187918509

GI number: 187918509

Start: 698736

End: 699635

Strand: Direct

Name: secF [H]

Synonym: BH0653

Alternate gene names: 187918509

Gene position: 698736-699635 (Clockwise)

Preceding gene: 187918508

Following gene: 187918510

Centisome position: 75.76

GC content: 25.67

Gene sequence:

>900_bases
ATGCAAAAAGTGTTTAATTTTTTAAAATATGGAAATAAAGCTATAATAGTTAGTATTTGTATGATTTTTTCGGGCTTTAT
TTACACTTTTATGTATCATGATGGTTATAATTGGGGAATAGACTTTTCTTCAGGGGTTAATATTAATTTTGTAATAGATA
AAGCAGGTATTAAAGATTATGATATGCAAAAGGTGCTCTTTCCAGTTTATAAAACATTTGATGTTAATGAAATTATTTCA
AGTGATGCTTCTAAGAGCCATTTTTCTATTATAGTTAAGTCAGACATTACTGATTATACTTTAAAAAAAGAAATTCACAC
TACATTAATCGATAAGTTGAATGCTGAATTTGGTGTTAATGTTGAAATTCTTGATTCTTATTTTATTGATTCGAATTTTT
CATCTATTTTAAGGACAAAATCAATGTTATTGGTTTGTTTAACATTTGCACTTATTTTAGTTTATGTGGCATTGAGATTT
AGGTTAAGTTATGCTGTTGCATCAATATTTGCAACGATTCATGATATACTTTTTGTGGTTGCTTTTTTAGGGGTATTTAG
AATAGAGATAAATAGTTCAATAATTGTTTCTATATTGACAATTATTGGGTATTCTTTAAATGATACGATAATTATTTTTG
ATAGGATTAGAGAAAATTCTAGGAATATGACAGATACTTCATTTTTAAATGTTTTAAATTTAAGCATTAGGCAAACTTTA
TCAAGAACTATTTTGACATCTATTACGACGTTTGTTGCTGTGCTTTCTATTTATGTGTTTACTGATGGTGCTATTAAGGA
TTTTTCTTTAATATTTATGGTAGGTGTTGTTGTTGGTACTTATTCTTCAATTTTTATAGCTTCTCCTATTCTTTTAAGTT
GTTATAAAAAAATTAAATAG

Upstream 100 bases:

>100_bases
GCATCACTTTTTAGTAGTTTAATCTTTTCAAGGTTTATTTTAGAAGTTATTATATCTTTAAGTAAAAGCAAATGTGTAAG
TATCTCTTGGAGTTCAAATT

Downstream 100 bases:

>100_bases
ATGTTTTGTTATAATATTATGATATGAAGTTTTTTGATTTTGGTTCATTAGGATTTTATAGGTTTTTTGATTTTCAGAAA
CATCTAAATTTTAGTATTTT

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MQKVFNFLKYGNKAIIVSICMIFSGFIYTFMYHDGYNWGIDFSSGVNINFVIDKAGIKDYDMQKVLFPVYKTFDVNEIIS
SDASKSHFSIIVKSDITDYTLKKEIHTTLIDKLNAEFGVNVEILDSYFIDSNFSSILRTKSMLLVCLTFALILVYVALRF
RLSYAVASIFATIHDILFVVAFLGVFRIEINSSIIVSILTIIGYSLNDTIIIFDRIRENSRNMTDTSFLNVLNLSIRQTL
SRTILTSITTFVAVLSIYVFTDGAIKDFSLIFMVGVVVGTYSSIFIASPILLSCYKKIK

Sequences:

>Translated_299_residues
MQKVFNFLKYGNKAIIVSICMIFSGFIYTFMYHDGYNWGIDFSSGVNINFVIDKAGIKDYDMQKVLFPVYKTFDVNEIIS
SDASKSHFSIIVKSDITDYTLKKEIHTTLIDKLNAEFGVNVEILDSYFIDSNFSSILRTKSMLLVCLTFALILVYVALRF
RLSYAVASIFATIHDILFVVAFLGVFRIEINSSIIVSILTIIGYSLNDTIIIFDRIRENSRNMTDTSFLNVLNLSIRQTL
SRTILTSITTFVAVLSIYVFTDGAIKDFSLIFMVGVVVGTYSSIFIASPILLSCYKKIK
>Mature_299_residues
MQKVFNFLKYGNKAIIVSICMIFSGFIYTFMYHDGYNWGIDFSSGVNINFVIDKAGIKDYDMQKVLFPVYKTFDVNEIIS
SDASKSHFSIIVKSDITDYTLKKEIHTTLIDKLNAEFGVNVEILDSYFIDSNFSSILRTKSMLLVCLTFALILVYVALRF
RLSYAVASIFATIHDILFVVAFLGVFRIEINSSIIVSILTIIGYSLNDTIIIFDRIRENSRNMTDTSFLNVLNLSIRQTL
SRTILTSITTFVAVLSIYVFTDGAIKDFSLIFMVGVVVGTYSSIFIASPILLSCYKKIK

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=302, Percent_Identity=30.4635761589404, Blast_Score=149, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 33842; Mature: 33842

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKVFNFLKYGNKAIIVSICMIFSGFIYTFMYHDGYNWGIDFSSGVNINFVIDKAGIKDY
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCC
DMQKVLFPVYKTFDVNEIISSDASKSHFSIIVKSDITDYTLKKEIHTTLIDKLNAEFGVN
HHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
VEILDSYFIDSNFSSILRTKSMLLVCLTFALILVYVALRFRLSYAVASIFATIHDILFVV
EEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLGVFRIEINSSIIVSILTIIGYSLNDTIIIFDRIRENSRNMTDTSFLNVLNLSIRQTL
HHHHHHEEEECCHHHHHHHHHHCCCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHH
SRTILTSITTFVAVLSIYVFTDGAIKDFSLIFMVGVVVGTYSSIFIASPILLSCYKKIK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKVFNFLKYGNKAIIVSICMIFSGFIYTFMYHDGYNWGIDFSSGVNINFVIDKAGIKDY
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCC
DMQKVLFPVYKTFDVNEIISSDASKSHFSIIVKSDITDYTLKKEIHTTLIDKLNAEFGVN
HHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
VEILDSYFIDSNFSSILRTKSMLLVCLTFALILVYVALRFRLSYAVASIFATIHDILFVV
EEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLGVFRIEINSSIIVSILTIIGYSLNDTIIIFDRIRENSRNMTDTSFLNVLNLSIRQTL
HHHHHHEEEECCHHHHHHHHHHCCCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHH
SRTILTSITTFVAVLSIYVFTDGAIKDFSLIFMVGVVVGTYSSIFIASPILLSCYKKIK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]