Definition | Borrelia hermsii DAH chromosome, complete genome. |
---|---|
Accession | NC_010673 |
Length | 922,307 |
Click here to switch to the map view.
The map label for this gene is 187918510
Identifier: 187918510
GI number: 187918510
Start: 699659
End: 700813
Strand: Direct
Name: 187918510
Synonym: BH0654
Alternate gene names: NA
Gene position: 699659-700813 (Clockwise)
Preceding gene: 187918509
Following gene: 187918512
Centisome position: 75.86
GC content: 25.02
Gene sequence:
>1155_bases ATGAAGTTTTTTGATTTTGGTTCATTAGGATTTTATAGGTTTTTTGATTTTCAGAAACATCTAAATTTTAGTATTTTTAG GTATAGTTTAATAAATTACTATTCTTATAAAGAACAGTCAAATCTTATTAATGATGCCAATTTGCTTAAATGTAAGATTG TCTTTTTAGATAAGACTCATAAGGATATTGCTAATATTGCTAGTGCTTCTTCTTCAAAGTTAAATGATAATTTAAATGTT AATAAAAAGGTGTTTTGCGATGTTTTAAATACTATTAAAAATTTGATAAAAAAGTATCATCCAGAATCAGAATTTCTAGA CTTAGAATGCGATGTACTTTTAAATAATGAAGATATTTTTAATAGATTTTTAGATAAACTTAGATATTTGAATTTTAGAG TAGATCTTAAAAAAAAGATTGAAGAATTTGACAGTAAAAATAAGACCCCATACTCTTGTATAAAAATTGCCACTTTTTTT ATTAAAGAAGAGTTTTTAGAAAGACTGGCAAACTCAATTGATTTCTTTTCTAATGAAGCTAATAATAATAGCCTGGATTT GATCAATAAAGAAATTGATGAGTATTGTGGAAAGGTGGAACAGGTAAAAGTAAGCGAGAATATTAAAGATACACATAAAA AATTTGTTATAGAATATGCCAAAGAAAGAATATCAAAAATTATGAAAGAGCATAGTCTTGATATATCTAAGTTGCTTATT AAAATTTCTCTCCTAGATATTACTATTCAGTGTTTTGAGAGTTATTATTTGAATTTATTAGAGACTCTCAATATCCTTTT GTCAATAAGTAATATTATTGATATTGGCTTAGATGAATTACCTGATGCTATTTTTAATGAGTGGAATGAATTTATTTATT TGCGCAGGAAAGAGTTTCAAAAACTTGTTTTAATATCAGATTATGTTTTTCAAAAAAGGATAATATCTACTATAAATTCT GGGGGTTGGAAATTTACTTTCTTTAGTCTTTCGCCCCGTCAAGGTGATATTATTCAATTTGCAGTGGATATTAATAAAAA TTTTAATAATATCGAGGATGGAATTAAGGAATATGAACTTAAAATAAATAGGCTTAATGATCTCAAGCTTGATTGGGAGA AAAGCTTAAAAAATTTTGAACATTTATTTGTTTAA
Upstream 100 bases:
>100_bases GTGTTGTTGTTGGTACTTATTCTTCAATTTTTATAGCTTCTCCTATTCTTTTAAGTTGTTATAAAAAAATTAAATAGATG TTTTGTTATAATATTATGAT
Downstream 100 bases:
>100_bases AATCCCTAATTATATATTTCTTTTAGTCTTTCATATATTTTTTTTACTTCATCATTAATGATTTTGGGTACATCTATTAT TAGCGTAGCTTTAAGATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKFFDFGSLGFYRFFDFQKHLNFSIFRYSLINYYSYKEQSNLINDANLLKCKIVFLDKTHKDIANIASASSSKLNDNLNV NKKVFCDVLNTIKNLIKKYHPESEFLDLECDVLLNNEDIFNRFLDKLRYLNFRVDLKKKIEEFDSKNKTPYSCIKIATFF IKEEFLERLANSIDFFSNEANNNSLDLINKEIDEYCGKVEQVKVSENIKDTHKKFVIEYAKERISKIMKEHSLDISKLLI KISLLDITIQCFESYYLNLLETLNILLSISNIIDIGLDELPDAIFNEWNEFIYLRRKEFQKLVLISDYVFQKRIISTINS GGWKFTFFSLSPRQGDIIQFAVDINKNFNNIEDGIKEYELKINRLNDLKLDWEKSLKNFEHLFV
Sequences:
>Translated_384_residues MKFFDFGSLGFYRFFDFQKHLNFSIFRYSLINYYSYKEQSNLINDANLLKCKIVFLDKTHKDIANIASASSSKLNDNLNV NKKVFCDVLNTIKNLIKKYHPESEFLDLECDVLLNNEDIFNRFLDKLRYLNFRVDLKKKIEEFDSKNKTPYSCIKIATFF IKEEFLERLANSIDFFSNEANNNSLDLINKEIDEYCGKVEQVKVSENIKDTHKKFVIEYAKERISKIMKEHSLDISKLLI KISLLDITIQCFESYYLNLLETLNILLSISNIIDIGLDELPDAIFNEWNEFIYLRRKEFQKLVLISDYVFQKRIISTINS GGWKFTFFSLSPRQGDIIQFAVDINKNFNNIEDGIKEYELKINRLNDLKLDWEKSLKNFEHLFV >Mature_384_residues MKFFDFGSLGFYRFFDFQKHLNFSIFRYSLINYYSYKEQSNLINDANLLKCKIVFLDKTHKDIANIASASSSKLNDNLNV NKKVFCDVLNTIKNLIKKYHPESEFLDLECDVLLNNEDIFNRFLDKLRYLNFRVDLKKKIEEFDSKNKTPYSCIKIATFF IKEEFLERLANSIDFFSNEANNNSLDLINKEIDEYCGKVEQVKVSENIKDTHKKFVIEYAKERISKIMKEHSLDISKLLI KISLLDITIQCFESYYLNLLETLNILLSISNIIDIGLDELPDAIFNEWNEFIYLRRKEFQKLVLISDYVFQKRIISTINS GGWKFTFFSLSPRQGDIIQFAVDINKNFNNIEDGIKEYELKINRLNDLKLDWEKSLKNFEHLFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45541; Mature: 45541
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFDFGSLGFYRFFDFQKHLNFSIFRYSLINYYSYKEQSNLINDANLLKCKIVFLDKTH CCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCH KDIANIASASSSKLNDNLNVNKKVFCDVLNTIKNLIKKYHPESEFLDLECDVLLNNEDIF HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHH NRFLDKLRYLNFRVDLKKKIEEFDSKNKTPYSCIKIATFFIKEEFLERLANSIDFFSNEA HHHHHHHHHHHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NNNSLDLINKEIDEYCGKVEQVKVSENIKDTHKKFVIEYAKERISKIMKEHSLDISKLLI CCCCHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH KISLLDITIQCFESYYLNLLETLNILLSISNIIDIGLDELPDAIFNEWNEFIYLRRKEFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHH KLVLISDYVFQKRIISTINSGGWKFTFFSLSPRQGDIIQFAVDINKNFNNIEDGIKEYEL HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHH KINRLNDLKLDWEKSLKNFEHLFV HEECCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKFFDFGSLGFYRFFDFQKHLNFSIFRYSLINYYSYKEQSNLINDANLLKCKIVFLDKTH CCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCH KDIANIASASSSKLNDNLNVNKKVFCDVLNTIKNLIKKYHPESEFLDLECDVLLNNEDIF HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHH NRFLDKLRYLNFRVDLKKKIEEFDSKNKTPYSCIKIATFFIKEEFLERLANSIDFFSNEA HHHHHHHHHHHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NNNSLDLINKEIDEYCGKVEQVKVSENIKDTHKKFVIEYAKERISKIMKEHSLDISKLLI CCCCHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH KISLLDITIQCFESYYLNLLETLNILLSISNIIDIGLDELPDAIFNEWNEFIYLRRKEFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHH KLVLISDYVFQKRIISTINSGGWKFTFFSLSPRQGDIIQFAVDINKNFNNIEDGIKEYEL HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHH KINRLNDLKLDWEKSLKNFEHLFV HEECCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA