Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is nanE [H]
Identifier: 187918500
GI number: 187918500
Start: 688788
End: 689423
Strand: Direct
Name: nanE [H]
Synonym: BH0644
Alternate gene names: 187918500
Gene position: 688788-689423 (Clockwise)
Preceding gene: 187918494
Following gene: 187918501
Centisome position: 74.68
GC content: 33.49
Gene sequence:
>636_bases TTGCATAGTAGTTTTATTATGTCTAAGATGGCCTTAGCAGCAAAGATGGGCGGAGCGGTTGGAATTAGAGCCAATAGTGT TCTAGATATTCGTCAAATAAAATCAGAAGTTGATTTACCCATAATAGGTATTATTAAGAGAGTTTATAATAATTCCCCTG TTTTTATTACGCCTACTATTAAAGAAGTCGATGAACTTTGTAGTGAAGGGGTCGATGTTATTGCTCTGGATGCTACTCTT AGAGAGCGTCCCGATGGTCTTTTGCTATCTGAATTTTTTAATAAGATTAAGAAGAAATATCCCAATCAGCTATTTATGGC AGATATTGCTTCTTTAGAGGAGGCTATTAATGCAGATAAGCTTGGATTTGATTTTATTGGCACGACTTTACATGGATATA CAAAGGATACTGAAGGGTGTAATATTGCAGATGATGATTTTGCCTTTTTAAAAAATTTACTTAAGTATGATTTCAAATCG AAGTTAATAGTTGAGGGAAAAATTGATACTCCTCTTAAGGCTAAGAGAAGTTTTGAACTTGGAATTTCTTTGGTTGTTGT AGGTGGGGCTATTACACGACCTATGGAAATTACGAAAAATTTTGTTGATAAAATAAATGAGGTTAAAGAAATTTGA
Upstream 100 bases:
>100_bases TAAGATTTTTGTGAACGATTAAGTCATAGGAGGTTTTGATATTATTGGAAAAATTAAAAGAGGTCTAATTGTCTCTTGCC AAGCTCTTGAAGGCGAACCT
Downstream 100 bases:
>100_bases GTGTTTTTATGATGTCTGATGAGTTTTTTTATAGACATATAGGAGGGTTTTATGGGGAAATTTTTTGAGAATGCCCAGAA ATTTGGGCGTTCTTTTATGT
Product: N-acetylmannosamine-6-phosphate 2-epimerase
Products: NA
Alternate protein names: ManNAc-6-P epimerase [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MHSSFIMSKMALAAKMGGAVGIRANSVLDIRQIKSEVDLPIIGIIKRVYNNSPVFITPTIKEVDELCSEGVDVIALDATL RERPDGLLLSEFFNKIKKKYPNQLFMADIASLEEAINADKLGFDFIGTTLHGYTKDTEGCNIADDDFAFLKNLLKYDFKS KLIVEGKIDTPLKAKRSFELGISLVVVGGAITRPMEITKNFVDKINEVKEI
Sequences:
>Translated_211_residues MHSSFIMSKMALAAKMGGAVGIRANSVLDIRQIKSEVDLPIIGIIKRVYNNSPVFITPTIKEVDELCSEGVDVIALDATL RERPDGLLLSEFFNKIKKKYPNQLFMADIASLEEAINADKLGFDFIGTTLHGYTKDTEGCNIADDDFAFLKNLLKYDFKS KLIVEGKIDTPLKAKRSFELGISLVVVGGAITRPMEITKNFVDKINEVKEI >Mature_211_residues MHSSFIMSKMALAAKMGGAVGIRANSVLDIRQIKSEVDLPIIGIIKRVYNNSPVFITPTIKEVDELCSEGVDVIALDATL RERPDGLLLSEFFNKIKKKYPNQLFMADIASLEEAINADKLGFDFIGTTLHGYTKDTEGCNIADDDFAFLKNLLKYDFKS KLIVEGKIDTPLKAKRSFELGISLVVVGGAITRPMEITKNFVDKINEVKEI
Specific function: Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (Potential) [H]
COG id: COG3010
COG function: function code G; Putative N-acetylmannosamine-6-phosphate epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nanE family [H]
Homologues:
Organism=Escherichia coli, GI1789617, Length=184, Percent_Identity=36.9565217391304, Blast_Score=111, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR007260 - InterPro: IPR011060 [H]
Pfam domain/function: PF04131 NanE [H]
EC number: =5.1.3.9 [H]
Molecular weight: Translated: 23391; Mature: 23391
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSSFIMSKMALAAKMGGAVGIRANSVLDIRQIKSEVDLPIIGIIKRVYNNSPVFITPTI CCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCH KEVDELCSEGVDVIALDATLRERPDGLLLSEFFNKIKKKYPNQLFMADIASLEEAINADK HHHHHHHHCCCCEEEECCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC LGFDFIGTTLHGYTKDTEGCNIADDDFAFLKNLLKYDFKSKLIVEGKIDTPLKAKRSFEL CCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHC GISLVVVGGAITRPMEITKNFVDKINEVKEI CEEEEEECCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHSSFIMSKMALAAKMGGAVGIRANSVLDIRQIKSEVDLPIIGIIKRVYNNSPVFITPTI CCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCH KEVDELCSEGVDVIALDATLRERPDGLLLSEFFNKIKKKYPNQLFMADIASLEEAINADK HHHHHHHHCCCCEEEECCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC LGFDFIGTTLHGYTKDTEGCNIADDDFAFLKNLLKYDFKSKLIVEGKIDTPLKAKRSFEL CCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHC GISLVVVGGAITRPMEITKNFVDKINEVKEI CEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA