Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918440
Identifier: 187918440
GI number: 187918440
Start: 600360
End: 601049
Strand: Direct
Name: 187918440
Synonym: BH0577
Alternate gene names: NA
Gene position: 600360-601049 (Clockwise)
Preceding gene: 187918439
Following gene: 187918441
Centisome position: 65.09
GC content: 26.81
Gene sequence:
>690_bases ATGTCTTTGATTTTACTAAGTCATTTATTGATTGGTTTATTTAATGTATTTCATAGATTTAAGAGTAGGTATATTCTTTT TGGATTTATTAAGGGGGATAAGATGAAGGAAAATGATGTTAAAAAGGCAATTGCGATGAAAAGATTAGTTAAATATTTCT TTGATGAGCTTAAATATAGAATGAAAATACCTTGTCTTAGACCAAGTAATAAAGATATGAGTAAAAAGTATATACTTCTT AATCTTTTAAGAAAAATAGCTAATCTGCCCTTTAATAAACAATATGAAATTGAAGAACAATTTCATATTGATGTTTTAGG AAAAGGCATGCTTACAGATGCAGTGCTTATTAAGAGATTGGATTATGAGAGATGTGTTATTACTGGTATCGTTGAGGTAA GAGCAGATCATGTTGATCTTGAGTATGAGCTTAATCGATTTTTGATTCGAAGGGGTAAGGTTAATGTTCTTTTTTGGCAA CCCAAAAAAGCCATTTTAAAGCAGAATGAGGATCTAATTATATTAGATATGGATGATATTTTTAAGCTCGATAATGATTT TTATTTGCCAGTGGTTAAAGAGAAGCTAGAAGATTTTATTAATCTTTTTATGAAATTTTTCTCTTATGAAGATATTTTAT TTGAGTATAATAAAATACACGGTAAATATTCTTTAGTTAAAAATAATTAA
Upstream 100 bases:
>100_bases AAATTCCAAAAAATAAGTTTTTTGTGGCTTGTCAATTTCATCCTGAGCTTATTACAAGACTTGAAAGCCCGTCTAAACTT TTTGTAGGCTTAGTAAAAGC
Downstream 100 bases:
>100_bases ATTATTATTTGGGTAGATGGTTTTTCTTAATTTATTACATTTTAAAGAGTTATTAAATTAAGTTGTTTTGATGTTGTTAG AAAATTCTTTTTTGTGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSLILLSHLLIGLFNVFHRFKSRYILFGFIKGDKMKENDVKKAIAMKRLVKYFFDELKYRMKIPCLRPSNKDMSKKYILL NLLRKIANLPFNKQYEIEEQFHIDVLGKGMLTDAVLIKRLDYERCVITGIVEVRADHVDLEYELNRFLIRRGKVNVLFWQ PKKAILKQNEDLIILDMDDIFKLDNDFYLPVVKEKLEDFINLFMKFFSYEDILFEYNKIHGKYSLVKNN
Sequences:
>Translated_229_residues MSLILLSHLLIGLFNVFHRFKSRYILFGFIKGDKMKENDVKKAIAMKRLVKYFFDELKYRMKIPCLRPSNKDMSKKYILL NLLRKIANLPFNKQYEIEEQFHIDVLGKGMLTDAVLIKRLDYERCVITGIVEVRADHVDLEYELNRFLIRRGKVNVLFWQ PKKAILKQNEDLIILDMDDIFKLDNDFYLPVVKEKLEDFINLFMKFFSYEDILFEYNKIHGKYSLVKNN >Mature_228_residues SLILLSHLLIGLFNVFHRFKSRYILFGFIKGDKMKENDVKKAIAMKRLVKYFFDELKYRMKIPCLRPSNKDMSKKYILLN LLRKIANLPFNKQYEIEEQFHIDVLGKGMLTDAVLIKRLDYERCVITGIVEVRADHVDLEYELNRFLIRRGKVNVLFWQP KKAILKQNEDLIILDMDDIFKLDNDFYLPVVKEKLEDFINLFMKFFSYEDILFEYNKIHGKYSLVKNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27493; Mature: 27362
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLILLSHLLIGLFNVFHRFKSRYILFGFIKGDKMKENDVKKAIAMKRLVKYFFDELKYR CHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH MKIPCLRPSNKDMSKKYILLNLLRKIANLPFNKQYEIEEQFHIDVLGKGMLTDAVLIKRL HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEECCCCHHHHHHHHHHC DYERCVITGIVEVRADHVDLEYELNRFLIRRGKVNVLFWQPKKAILKQNEDLIILDMDDI CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCEEEEEHHHH FKLDNDFYLPVVKEKLEDFINLFMKFFSYEDILFEYNKIHGKYSLVKNN HHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC >Mature Secondary Structure SLILLSHLLIGLFNVFHRFKSRYILFGFIKGDKMKENDVKKAIAMKRLVKYFFDELKYR HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH MKIPCLRPSNKDMSKKYILLNLLRKIANLPFNKQYEIEEQFHIDVLGKGMLTDAVLIKRL HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEECCCCHHHHHHHHHHC DYERCVITGIVEVRADHVDLEYELNRFLIRRGKVNVLFWQPKKAILKQNEDLIILDMDDI CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCEEEEEHHHH FKLDNDFYLPVVKEKLEDFINLFMKFFSYEDILFEYNKIHGKYSLVKNN HHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA