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The map label for this gene is tlpA [H]

Identifier: 187918441

GI number: 187918441

Start: 601159

End: 602337

Strand: Direct

Name: tlpA [H]

Synonym: BH0578

Alternate gene names: 187918441

Gene position: 601159-602337 (Clockwise)

Preceding gene: 187918440

Following gene: 187918442

Centisome position: 65.18

GC content: 29.69

Gene sequence:

>1179_bases
ATGTATAAATTTTTATTTTTTGGCAAGGCAAAATCTAATATATCCAACTTGTCTAAGGATGAGCCTTTAAAGGGTATTGA
AGATAAGAAAGATTTGAATGAATGTAAATATACAATTCCTATTAAAGAGATAATAAAGGGGTTTTATCACACTAAATCTT
CTATTAGTAATGTATTAGTTCATATTGAATTTTTATATAACAATCTATTTTCTAACTTTGAGAATATTGATGAAGTTTTT
GAGTCGCTTATTAATAAAACAAATAATGCTCGCATGCAAATGAGTGTTATTTTTGAAGATATTGAAAAGACTAATGAAGA
AAAATTGAAAAGAGTTAGTGATGTTATTGTAGGTGTTCAAGGAAGTTTAGAGACTATCAATAGTTTTTTAGGCGCAACTA
ATATGATTTCTCTTAATGCTAAGCTTGAAGCAGCAAGAGCAAAAGAGTATGGGAAAGGATTTTCTGTTGTTGCTGATGAG
ATTAAGCGGCTCTCAGATCAGGCAAAGGGTGTTATGAGTATGATTTCTGTTAAGGAAATTGAGCAGGTGTCTAAAGATTT
AGTTTCTAAAAATATTAAGGAATTGCAATTAGATATTGATAATTTTTTCTCAAGTTTGGTTAAAGAACTTACTTCTCTTG
AAGAGTTATTTAAACATTTTGTTAGTCAGCAAAATGAATTTTCAACGCTAATTAGTGAGCTTGAAAATGTTGAAGCTAAC
ATTTCTTATTTGGCAAGGAATTGTGATTCTTGCTCTAGTTCTGAGACTTTTATTTATTCTAATGATGAATTTTTAAAGGA
ATTAGAATTTATCATTTCAGAACAGATGTCTTGGATGAGTATTGTAAGATTAATTGTTGAAAATCAAAAGAGCATGGCGA
TTCAAACTGATCCTATGAAACATGGGTTTGGATTATTTTATAAGGGACTTGCTCCAAAGGCCCGCGAGGTTAGAGAAGTT
TGGGAGAATATTTATTCTTGTTATTTAAATGTTCATAAACTTGTTGTTAAGATAATAAAAGTGTTTGCACAAGATGGTTC
TGATGATATCAATTTGAACCAAGCAAGGGATTTTTTAATGCAGGCTGAAAGTTTGTCAGATGAAATTATTAGCAAACTTG
AATCTGTCAAAAAAATAGTAGTTGAATCTGAAGATCAGGGTATTAATGTTTTTGCATAA

Upstream 100 bases:

>100_bases
TGGGTAGATGGTTTTTCTTAATTTATTACATTTTAAAGAGTTATTAAATTAAGTTGTTTTGATGTTGTTAGAAAATTCTT
TTTTGTGGTAAAATCTTTTC

Downstream 100 bases:

>100_bases
TTTTTAATTTATTATTTTTCTTAATCTGTTTTTTAAGTGGTTTGAGTTTAATATTTAAGGATTTGTTATTCAATGTTTTG
GGTTAGGTTGAGGTATATCT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MYKFLFFGKAKSNISNLSKDEPLKGIEDKKDLNECKYTIPIKEIIKGFYHTKSSISNVLVHIEFLYNNLFSNFENIDEVF
ESLINKTNNARMQMSVIFEDIEKTNEEKLKRVSDVIVGVQGSLETINSFLGATNMISLNAKLEAARAKEYGKGFSVVADE
IKRLSDQAKGVMSMISVKEIEQVSKDLVSKNIKELQLDIDNFFSSLVKELTSLEELFKHFVSQQNEFSTLISELENVEAN
ISYLARNCDSCSSSETFIYSNDEFLKELEFIISEQMSWMSIVRLIVENQKSMAIQTDPMKHGFGLFYKGLAPKAREVREV
WENIYSCYLNVHKLVVKIIKVFAQDGSDDINLNQARDFLMQAESLSDEIISKLESVKKIVVESEDQGINVFA

Sequences:

>Translated_392_residues
MYKFLFFGKAKSNISNLSKDEPLKGIEDKKDLNECKYTIPIKEIIKGFYHTKSSISNVLVHIEFLYNNLFSNFENIDEVF
ESLINKTNNARMQMSVIFEDIEKTNEEKLKRVSDVIVGVQGSLETINSFLGATNMISLNAKLEAARAKEYGKGFSVVADE
IKRLSDQAKGVMSMISVKEIEQVSKDLVSKNIKELQLDIDNFFSSLVKELTSLEELFKHFVSQQNEFSTLISELENVEAN
ISYLARNCDSCSSSETFIYSNDEFLKELEFIISEQMSWMSIVRLIVENQKSMAIQTDPMKHGFGLFYKGLAPKAREVREV
WENIYSCYLNVHKLVVKIIKVFAQDGSDDINLNQARDFLMQAESLSDEIISKLESVKKIVVESEDQGINVFA
>Mature_392_residues
MYKFLFFGKAKSNISNLSKDEPLKGIEDKKDLNECKYTIPIKEIIKGFYHTKSSISNVLVHIEFLYNNLFSNFENIDEVF
ESLINKTNNARMQMSVIFEDIEKTNEEKLKRVSDVIVGVQGSLETINSFLGATNMISLNAKLEAARAKEYGKGFSVVADE
IKRLSDQAKGVMSMISVKEIEQVSKDLVSKNIKELQLDIDNFFSSLVKELTSLEELFKHFVSQQNEFSTLISELENVEAN
ISYLARNCDSCSSSETFIYSNDEFLKELEFIISEQMSWMSIVRLIVENQKSMAIQTDPMKHGFGLFYKGLAPKAREVREV
WENIYSCYLNVHKLVVKIIKVFAQDGSDDINLNQARDFLMQAESLSDEIISKLESVKKIVVESEDQGINVFA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 44744; Mature: 44744

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKFLFFGKAKSNISNLSKDEPLKGIEDKKDLNECKYTIPIKEIIKGFYHTKSSISNVLV
CCEEEEECCCHHHHHCCCCCCCCCCCCCHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHH
HIEFLYNNLFSNFENIDEVFESLINKTNNARMQMSVIFEDIEKTNEEKLKRVSDVIVGVQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
GSLETINSFLGATNMISLNAKLEAARAKEYGKGFSVVADEIKRLSDQAKGVMSMISVKEI
CCHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQVSKDLVSKNIKELQLDIDNFFSSLVKELTSLEELFKHFVSQQNEFSTLISELENVEAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ISYLARNCDSCSSSETFIYSNDEFLKELEFIISEQMSWMSIVRLIVENQKSMAIQTDPMK
HHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCEEECCCCH
HGFGLFYKGLAPKAREVREVWENIYSCYLNVHKLVVKIIKVFAQDGSDDINLNQARDFLM
HCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QAESLSDEIISKLESVKKIVVESEDQGINVFA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MYKFLFFGKAKSNISNLSKDEPLKGIEDKKDLNECKYTIPIKEIIKGFYHTKSSISNVLV
CCEEEEECCCHHHHHCCCCCCCCCCCCCHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHH
HIEFLYNNLFSNFENIDEVFESLINKTNNARMQMSVIFEDIEKTNEEKLKRVSDVIVGVQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
GSLETINSFLGATNMISLNAKLEAARAKEYGKGFSVVADEIKRLSDQAKGVMSMISVKEI
CCHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQVSKDLVSKNIKELQLDIDNFFSSLVKELTSLEELFKHFVSQQNEFSTLISELENVEAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ISYLARNCDSCSSSETFIYSNDEFLKELEFIISEQMSWMSIVRLIVENQKSMAIQTDPMK
HHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCEEECCCCH
HGFGLFYKGLAPKAREVREVWENIYSCYLNVHKLVVKIIKVFAQDGSDDINLNQARDFLM
HCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QAESLSDEIISKLESVKKIVVESEDQGINVFA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]