Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is 187918406

Identifier: 187918406

GI number: 187918406

Start: 561575

End: 562207

Strand: Direct

Name: 187918406

Synonym: BH0543

Alternate gene names: NA

Gene position: 561575-562207 (Clockwise)

Preceding gene: 187918405

Following gene: 187918407

Centisome position: 60.89

GC content: 33.65

Gene sequence:

>633_bases
ATGCAGATAAAGATTTTATTTTTAAGCTTGTTGATCTTTGTTACAAGCAATGCTTTCACGGATGTTAAATTTGAACTTAA
TCTGGGGTTTGGTTTGGATTTTCCGGTAAGTACTATTTCAAACTTTTATAATACGGCTTTAGATGTTGGCGAAAGACTTG
AGAATAGTATGTCTGATTTGGAGAGAGAGAAGATCATTAAAGATTTTGCGGATATGGTTAATATTTCTAAGACTGGTTTG
ACTTATGGGGGACATGCTCAAATGGGAGCAAGATTTGATGATTTCTGTTCACTTGGTTTTGAACTTGGATTTAATTTTAA
TGTATTTAGGTGCGTTAATCGTAAAGGACGATTGAATGATATTCATTCATTCATTGCGGCTATTGAATCTAGGTTTTATA
CAAGGTTAGACTTTTTCATTGGATCTGTTGCATTATTTACAGGGCCTAGAGCTAATATGGCTACCGCTATTGTTGATTCT
ATCTTGAATGAATTTGATATGTTTGGTTGGGATCTTGGAGCAAGGGCTACATTTGCTTTCTTGGCACTTGAGGGATATTA
TTGTTGGAATATTCATAATAATAAATTTTCTGATTTTAAGGTTGGTATAGGGTTTGAGTTTGAAGTTATCTAG

Upstream 100 bases:

>100_bases
GGATCAAAGTTAAAAATTGTTTTGTACTAATTTTGATATTTGTTGTTCCATGAGCTTAATGTGCAATTTCATTTAAGTAT
TTTGGGAGGAGTTAAATATT

Downstream 100 bases:

>100_bases
ATAACAAATAAATTTTTGCATTATTTAGTTTTTAATTTACTCATGATGAATATTTTTACTGTTTTAACTTTATAGATCTT
TCTTAAGCTTGTGTGAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MQIKILFLSLLIFVTSNAFTDVKFELNLGFGLDFPVSTISNFYNTALDVGERLENSMSDLEREKIIKDFADMVNISKTGL
TYGGHAQMGARFDDFCSLGFELGFNFNVFRCVNRKGRLNDIHSFIAAIESRFYTRLDFFIGSVALFTGPRANMATAIVDS
ILNEFDMFGWDLGARATFAFLALEGYYCWNIHNNKFSDFKVGIGFEFEVI

Sequences:

>Translated_210_residues
MQIKILFLSLLIFVTSNAFTDVKFELNLGFGLDFPVSTISNFYNTALDVGERLENSMSDLEREKIIKDFADMVNISKTGL
TYGGHAQMGARFDDFCSLGFELGFNFNVFRCVNRKGRLNDIHSFIAAIESRFYTRLDFFIGSVALFTGPRANMATAIVDS
ILNEFDMFGWDLGARATFAFLALEGYYCWNIHNNKFSDFKVGIGFEFEVI
>Mature_210_residues
MQIKILFLSLLIFVTSNAFTDVKFELNLGFGLDFPVSTISNFYNTALDVGERLENSMSDLEREKIIKDFADMVNISKTGL
TYGGHAQMGARFDDFCSLGFELGFNFNVFRCVNRKGRLNDIHSFIAAIESRFYTRLDFFIGSVALFTGPRANMATAIVDS
ILNEFDMFGWDLGARATFAFLALEGYYCWNIHNNKFSDFKVGIGFEFEVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23812; Mature: 23812

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKILFLSLLIFVTSNAFTDVKFELNLGFGLDFPVSTISNFYNTALDVGERLENSMSDL
CEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EREKIIKDFADMVNISKTGLTYGGHAQMGARFDDFCSLGFELGFNFNVFRCVNRKGRLND
HHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHH
IHSFIAAIESRFYTRLDFFIGSVALFTGPRANMATAIVDSILNEFDMFGWDLGARATFAF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LALEGYYCWNIHNNKFSDFKVGIGFEFEVI
EEECCEEEEEEECCCCCCEEEECCEEEEEC
>Mature Secondary Structure
MQIKILFLSLLIFVTSNAFTDVKFELNLGFGLDFPVSTISNFYNTALDVGERLENSMSDL
CEEHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EREKIIKDFADMVNISKTGLTYGGHAQMGARFDDFCSLGFELGFNFNVFRCVNRKGRLND
HHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHH
IHSFIAAIESRFYTRLDFFIGSVALFTGPRANMATAIVDSILNEFDMFGWDLGARATFAF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LALEGYYCWNIHNNKFSDFKVGIGFEFEVI
EEECCEEEEEEECCCCCCEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA