Click here to switch to the map view.

The map label for this gene is 187918405

Identifier: 187918405

GI number: 187918405

Start: 560948

End: 561487

Strand: Direct

Name: 187918405

Synonym: BH0542

Alternate gene names: NA

Gene position: 560948-561487 (Clockwise)

Preceding gene: 187918404

Following gene: 187918406

Centisome position: 60.82

GC content: 26.11

Gene sequence:

>540_bases
GTGTATAAGGAATTATTTTTATTTCTTTTTTATTTTGTATTATCTTGTAAAACTTTTTCTCAAGATTATCAAGCTATCTC
GGATGAGTATTATAAGCTTGCCAAATTAAATGAGGAACTTGGTAATAATCAGGCATCAGTTTTACTTTATGAACAAGCTA
TTAAATTTAATCCTAATGCGAATGATGCATCTAGTTATAATTTTATTTTGGCTTACATCAATTTAAAGAAATATGATGAG
GCTGAGTTAAAGCTAGAATCTTTATTGAAAAATGATCCAAATAATATTTTGTTGATTAATTTAAAAGCTTATTTATCCTT
TAGAAAGGATAAATTGGAAGAGGCTTTAAAATTTTATTTAAGCACTTTAGAGGTAGTGCCCGCTAATCAAGAAGCGTTAT
TTAATGTTTTTTATATTTATCATTTAAAAAAGGATATAGAAAATGCGAAGAAGTATATCTTAAAATATAAGGAATTCAAA
TATTCAGTTCCTTCTAATGCAAGTGAGATAGTATCATCCGTTTTGAAGGATCAAAGTTAA

Upstream 100 bases:

>100_bases
TTGGGCTTGGATTTGAGATTCCAATAATTATTTAGGCATCAATATTGATTGATATTTTATTTAATATTTATACTAATCTA
GTATTCAGGTTTTGCTTTAA

Downstream 100 bases:

>100_bases
AAATTGTTTTGTACTAATTTTGATATTTGTTGTTCCATGAGCTTAATGTGCAATTTCATTTAAGTATTTTGGGAGGAGTT
AAATATTATGCAGATAAAGA

Product: tetratricopeptide repeat family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MYKELFLFLFYFVLSCKTFSQDYQAISDEYYKLAKLNEELGNNQASVLLYEQAIKFNPNANDASSYNFILAYINLKKYDE
AELKLESLLKNDPNNILLINLKAYLSFRKDKLEEALKFYLSTLEVVPANQEALFNVFYIYHLKKDIENAKKYILKYKEFK
YSVPSNASEIVSSVLKDQS

Sequences:

>Translated_179_residues
MYKELFLFLFYFVLSCKTFSQDYQAISDEYYKLAKLNEELGNNQASVLLYEQAIKFNPNANDASSYNFILAYINLKKYDE
AELKLESLLKNDPNNILLINLKAYLSFRKDKLEEALKFYLSTLEVVPANQEALFNVFYIYHLKKDIENAKKYILKYKEFK
YSVPSNASEIVSSVLKDQS
>Mature_179_residues
MYKELFLFLFYFVLSCKTFSQDYQAISDEYYKLAKLNEELGNNQASVLLYEQAIKFNPNANDASSYNFILAYINLKKYDE
AELKLESLLKNDPNNILLINLKAYLSFRKDKLEEALKFYLSTLEVVPANQEALFNVFYIYHLKKDIENAKKYILKYKEFK
YSVPSNASEIVSSVLKDQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20995; Mature: 20995

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKELFLFLFYFVLSCKTFSQDYQAISDEYYKLAKLNEELGNNQASVLLYEQAIKFNPNA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHEEECCCC
NDASSYNFILAYINLKKYDEAELKLESLLKNDPNNILLINLKAYLSFRKDKLEEALKFYL
CCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
STLEVVPANQEALFNVFYIYHLKKDIENAKKYILKYKEFKYSVPSNASEIVSSVLKDQS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MYKELFLFLFYFVLSCKTFSQDYQAISDEYYKLAKLNEELGNNQASVLLYEQAIKFNPNA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHEEECCCC
NDASSYNFILAYINLKKYDEAELKLESLLKNDPNNILLINLKAYLSFRKDKLEEALKFYL
CCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
STLEVVPANQEALFNVFYIYHLKKDIENAKKYILKYKEFKYSVPSNASEIVSSVLKDQS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA