Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is 187918404

Identifier: 187918404

GI number: 187918404

Start: 559803

End: 560882

Strand: Direct

Name: 187918404

Synonym: BH0541A

Alternate gene names: NA

Gene position: 559803-560882 (Clockwise)

Preceding gene: 187918403

Following gene: 187918405

Centisome position: 60.7

GC content: 30.65

Gene sequence:

>1080_bases
ATGAAGAAATTTTTGATTGTTATTATATTATTCTTGTTTTTTAGTACATCTTATGCTAAAGTTTTGTATTTCTCAGCAGG
TTTTAGCACACAAATTAGTCTTGAGTCACTTTCTTTATTTAATAGAAAGACTGGTACAGTTTTCGATAAGTTGCTAAGTT
CTGAATTATTCCCTATATTGCAAAATTTTAGAAATAATTTTTTTCCTCGTTGGAGTGCATTTGAGGATAGTGCATCTGAT
TTATATGTTTCTTTTAAAAAAAATTTAGGTATTTTTAAGACATTGTATAGGGGGAGGAAAAATAAAGATTCACAACTGAG
TAAAATGGAAGAATCTGATTTGGATGAGCTAGGTGCACTTTTAAATAGTAGTCATGATTTAAGAAAATTTTTGACTGAAC
TAAAAAAGTTAGACAAAAGGTCTACACTTAAAAAGTTGGATGAAGCTGGATTGAATATGAAAAAGCTTTTAGCTACTTTG
GGAGAAACAACAGAACGTGCTATTGAGCTACAGGAAGTGTTATTTGGACAATTAAGTGAATTTGGAATTGATAGTCACGA
TGATTTTATGAGATTATGGAAGGAAGTTTTTATACCAGGGAGTGTTTTAAATAATGCTTTGCGGCAAAAGTTGTCACCTT
TATTTAGTGCTGGTTTTCAAGGTTATTTTCAGATTGGTCTTCCTATTGCTTCCAGTAATTTTTATTATGGATTTGAACTT
GGGTTTGGTGTGAATCTTGGAAGGATGATTGCACCCAATTTAAACCTTTTAAAGGCTTCCTATCCTGTTAATTTGGGCTT
AGGAATAATGCCAAGATTATTCATGAAATATGATATTTATTATTTAGCAGCTACTTTATTTTCAGGCTTTGGTGATAGAT
CTTTAGTTGTAGATCCTATTTATGTTGGGAATTTAAGTGATAATGCTGTAGTAACTAATCCTTTTAGCGTTATTGAGACG
GGTCTTAGATTGAGACTAGCCTTTATTAATTTGGAATCATCAGTATTATTTTCTATTAATGATTTTAAATATAGAGACTT
AAGGGTTGGGCTTGGATTTGAGATTCCAATAATTATTTAG

Upstream 100 bases:

>100_bases
ACAATGCAATTGTGTTTTTTAAATTGCATTGTATTTTTTTGCAATAAAGGTTATTATAATTTAGTTATTAAATAATTTTT
GTTTAATAAGGGTTTAATGG

Downstream 100 bases:

>100_bases
GCATCAATATTGATTGATATTTTATTTAATATTTATACTAATCTAGTATTCAGGTTTTGCTTTAAGTGTATAAGGAATTA
TTTTTATTTCTTTTTTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKKFLIVIILFLFFSTSYAKVLYFSAGFSTQISLESLSLFNRKTGTVFDKLLSSELFPILQNFRNNFFPRWSAFEDSASD
LYVSFKKNLGIFKTLYRGRKNKDSQLSKMEESDLDELGALLNSSHDLRKFLTELKKLDKRSTLKKLDEAGLNMKKLLATL
GETTERAIELQEVLFGQLSEFGIDSHDDFMRLWKEVFIPGSVLNNALRQKLSPLFSAGFQGYFQIGLPIASSNFYYGFEL
GFGVNLGRMIAPNLNLLKASYPVNLGLGIMPRLFMKYDIYYLAATLFSGFGDRSLVVDPIYVGNLSDNAVVTNPFSVIET
GLRLRLAFINLESSVLFSINDFKYRDLRVGLGFEIPIII

Sequences:

>Translated_359_residues
MKKFLIVIILFLFFSTSYAKVLYFSAGFSTQISLESLSLFNRKTGTVFDKLLSSELFPILQNFRNNFFPRWSAFEDSASD
LYVSFKKNLGIFKTLYRGRKNKDSQLSKMEESDLDELGALLNSSHDLRKFLTELKKLDKRSTLKKLDEAGLNMKKLLATL
GETTERAIELQEVLFGQLSEFGIDSHDDFMRLWKEVFIPGSVLNNALRQKLSPLFSAGFQGYFQIGLPIASSNFYYGFEL
GFGVNLGRMIAPNLNLLKASYPVNLGLGIMPRLFMKYDIYYLAATLFSGFGDRSLVVDPIYVGNLSDNAVVTNPFSVIET
GLRLRLAFINLESSVLFSINDFKYRDLRVGLGFEIPIII
>Mature_359_residues
MKKFLIVIILFLFFSTSYAKVLYFSAGFSTQISLESLSLFNRKTGTVFDKLLSSELFPILQNFRNNFFPRWSAFEDSASD
LYVSFKKNLGIFKTLYRGRKNKDSQLSKMEESDLDELGALLNSSHDLRKFLTELKKLDKRSTLKKLDEAGLNMKKLLATL
GETTERAIELQEVLFGQLSEFGIDSHDDFMRLWKEVFIPGSVLNNALRQKLSPLFSAGFQGYFQIGLPIASSNFYYGFEL
GFGVNLGRMIAPNLNLLKASYPVNLGLGIMPRLFMKYDIYYLAATLFSGFGDRSLVVDPIYVGNLSDNAVVTNPFSVIET
GLRLRLAFINLESSVLFSINDFKYRDLRVGLGFEIPIII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40746; Mature: 40746

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLIVIILFLFFSTSYAKVLYFSAGFSTQISLESLSLFNRKTGTVFDKLLSSELFPIL
CHHHHHHHHHHHHHCCCHHEEEEEECCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHH
QNFRNNFFPRWSAFEDSASDLYVSFKKNLGIFKTLYRGRKNKDSQLSKMEESDLDELGAL
HHHHHCCCCCCCCCCCCCHHEEEEHHHCCHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHH
LNSSHDLRKFLTELKKLDKRSTLKKLDEAGLNMKKLLATLGETTERAIELQEVLFGQLSE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGIDSHDDFMRLWKEVFIPGSVLNNALRQKLSPLFSAGFQGYFQIGLPIASSNFYYGFEL
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCEEEEEEE
GFGVNLGRMIAPNLNLLKASYPVNLGLGIMPRLFMKYDIYYLAATLFSGFGDRSLVVDPI
CCCCCCCHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCE
YVGNLSDNAVVTNPFSVIETGLRLRLAFINLESSVLFSINDFKYRDLRVGLGFEIPIII
EECCCCCCCEEECCHHHHHHCCEEEEEEEEECCEEEEEECCCEEEEEEECCCCCCCEEC
>Mature Secondary Structure
MKKFLIVIILFLFFSTSYAKVLYFSAGFSTQISLESLSLFNRKTGTVFDKLLSSELFPIL
CHHHHHHHHHHHHHCCCHHEEEEEECCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHH
QNFRNNFFPRWSAFEDSASDLYVSFKKNLGIFKTLYRGRKNKDSQLSKMEESDLDELGAL
HHHHHCCCCCCCCCCCCCHHEEEEHHHCCHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHH
LNSSHDLRKFLTELKKLDKRSTLKKLDEAGLNMKKLLATLGETTERAIELQEVLFGQLSE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGIDSHDDFMRLWKEVFIPGSVLNNALRQKLSPLFSAGFQGYFQIGLPIASSNFYYGFEL
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCEEEEEEE
GFGVNLGRMIAPNLNLLKASYPVNLGLGIMPRLFMKYDIYYLAATLFSGFGDRSLVVDPI
CCCCCCCHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCE
YVGNLSDNAVVTNPFSVIETGLRLRLAFINLESSVLFSINDFKYRDLRVGLGFEIPIII
EECCCCCCCEEECCHHHHHHCCEEEEEEEEECCEEEEEECCCEEEEEEECCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA