Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is 187918403

Identifier: 187918403

GI number: 187918403

Start: 559375

End: 559617

Strand: Direct

Name: 187918403

Synonym: BH0541

Alternate gene names: NA

Gene position: 559375-559617 (Clockwise)

Preceding gene: 187918397

Following gene: 187918404

Centisome position: 60.65

GC content: 26.34

Gene sequence:

>243_bases
TTGGAGGATATAAGTTTGAATACTTTAACAATATCTCATGAATTAAGCAAGATATGTCAAGTTGATTATGATTCTGCTTT
GTCTGAACTTTCTGTATTTTTTAAAGACGGAAGAGCTTATAAATATTTCAAAATTGAACCAAGACATTTTAATATAATAT
CTAAGCTTGTTCAAGAAAAAAGGTCAGTTGGCAAATATTTAACAGAACATATATTTAATAAGTATGACCAAGAAAAGCTT
TAA

Upstream 100 bases:

>100_bases
AATTTTTTTAGTAAATTTTGATTTTATTGATTAAAAATACTTAACATTTAATAAATTTACTCTTTCTTTACTTTATATTT
TATACTCCTAAGAATAACCA

Downstream 100 bases:

>100_bases
TTTTAGTTTTTGACTTAGTTATTTTAGAAGGATTCTTAAATATTATATGAATCCTTCTTTATTGATTTGCTTTTAAGCTT
ATATTACAATGCAATTGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MEDISLNTLTISHELSKICQVDYDSALSELSVFFKDGRAYKYFKIEPRHFNIISKLVQEKRSVGKYLTEHIFNKYDQEKL

Sequences:

>Translated_80_residues
MEDISLNTLTISHELSKICQVDYDSALSELSVFFKDGRAYKYFKIEPRHFNIISKLVQEKRSVGKYLTEHIFNKYDQEKL
>Mature_80_residues
MEDISLNTLTISHELSKICQVDYDSALSELSVFFKDGRAYKYFKIEPRHFNIISKLVQEKRSVGKYLTEHIFNKYDQEKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9491; Mature: 9491

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDISLNTLTISHELSKICQVDYDSALSELSVFFKDGRAYKYFKIEPRHFNIISKLVQEK
CCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH
RSVGKYLTEHIFNKYDQEKL
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEDISLNTLTISHELSKICQVDYDSALSELSVFFKDGRAYKYFKIEPRHFNIISKLVQEK
CCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH
RSVGKYLTEHIFNKYDQEKL
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]