Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is 187918324

Identifier: 187918324

GI number: 187918324

Start: 484010

End: 485374

Strand: Direct

Name: 187918324

Synonym: BH0459

Alternate gene names: NA

Gene position: 484010-485374 (Clockwise)

Preceding gene: 187918323

Following gene: 187918326

Centisome position: 52.48

GC content: 27.11

Gene sequence:

>1365_bases
ATGAAGCGTCTTTTTCAAAAGAGATTTCTGTCAGACCTATGGAGTTTTTTGAGCAATATGAATAGTATTAATTTTGAGCA
AGCCTTAGAGCTTTATAAAAAGGGCGATTTTAAGAATGCTCTTTTAAATCTTGATGTTTTTGATGATAGTTTTGATTCTC
TATCTCTTAAGTCTTTAATTTATTTTAAACTAAAGGATTATAAGGCACTCCTATATGTATTAGATACTTATCCTGTTTTA
AATGAGTATAATTTTTTAATTAAACTTTTACATTATGGTAAATTTGAGGGTCAAGAAGATGAATTGAGTTATTTCCAAAA
TTATAATCTTGGTGTTTTTTATTTTGGATTAAAAGATTATGAGAAATCTTTAAGTTGTTTTTTAAAAGCCAATAAGCAAC
ATCCTAGCTTGATTCAGGCTATTAATAATGCTGCTATTTTATTTGAGATTTTGGGCAGGAAAGATGAGGCTATCCAAATG
ATTGTTAAAGCTGTTGATGTGGATAAAAATAATGCTCTTGTTAAATTAAATGCTTGGTTTTTAAAAAATAATTGTATATT
CAAGGATGCTAAACCATTTGAGATAGATGAGAGTTTTAAAGAGGCCAATCTTTCTCTTATTGTTAATTATTTAATGTATT
ATCTTTATTTTATTGGAGAGATCAGTGGTGCAATTAAACTTTCCGAGAAATTTTTAACAGATTCGAGTTATTCTAAATAT
ATTTGGCATAATAGAGCAACTATTTTGCATAAAATAGGTAATATGACGCAAGCCACTAAATCCTATGTAAAAGCTATTTT
AAGTTTTCCCAATATTTATACAATATATAATATGCATATTGCTACAATAGAGCTTTTAAATTTTTCTCCTAAGAGAGCTA
TTGATAGAATGTTGTTAGATTATCCTAATATGGATTTAGTTTATTTTTATGCATTTTTATTTTTTTTAAGGAATCGTGAG
CTTGAAGATGCTCATTTTTATCTTAAAAAGCTTTGTGAAATTAAACCAGATATTTATTCTGCATTTTTAAATTTACTTGA
ATCTAGAGAAGATATTTTGATTGAAGAACTCTTAGACGAATTTGCAGTGTTTTTAAAGGGCAAATGGACGTTGGAATATT
TGTTCTTTATTGACAATTCCTTGAATTTAAAAGATCCTGTTTTTGTATTTGATTATAATACTAGACTGTGTCCATATATT
TGGAAAATTAGAGATGAACATATTGAACTTAGAGCTAGCAACAATGAAGTGGAACTTGCTGAGAAAATTTTTTTAGATGA
ACTTACACGAATTAAATTGGATGTTGCAATTAAAGAGATTAGAGACTTAATTGATGCTTATAGGGATTTTAGGATCAATT
ATTAA

Upstream 100 bases:

>100_bases
ATTGATGTTGGTAATCAGACTTCTTTTAGAATTACAGGTCTTGAGAATGGAAGGCTTTATTATGTTAGTGTTGCTTCTTA
TAATTTAGACAAGAGTGTAA

Downstream 100 bases:

>100_bases
GGCTTTAAAAGTTATTTTTTGTTGACAATGTAATGACTCTAATATACTATTTATTAGTATACTTTCAAGGAGAGATGCCA
GAGTGGCCGAATGGGGCTTC

Product: tetratricopeptide repeat family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MKRLFQKRFLSDLWSFLSNMNSINFEQALELYKKGDFKNALLNLDVFDDSFDSLSLKSLIYFKLKDYKALLYVLDTYPVL
NEYNFLIKLLHYGKFEGQEDELSYFQNYNLGVFYFGLKDYEKSLSCFLKANKQHPSLIQAINNAAILFEILGRKDEAIQM
IVKAVDVDKNNALVKLNAWFLKNNCIFKDAKPFEIDESFKEANLSLIVNYLMYYLYFIGEISGAIKLSEKFLTDSSYSKY
IWHNRATILHKIGNMTQATKSYVKAILSFPNIYTIYNMHIATIELLNFSPKRAIDRMLLDYPNMDLVYFYAFLFFLRNRE
LEDAHFYLKKLCEIKPDIYSAFLNLLESREDILIEELLDEFAVFLKGKWTLEYLFFIDNSLNLKDPVFVFDYNTRLCPYI
WKIRDEHIELRASNNEVELAEKIFLDELTRIKLDVAIKEIRDLIDAYRDFRINY

Sequences:

>Translated_454_residues
MKRLFQKRFLSDLWSFLSNMNSINFEQALELYKKGDFKNALLNLDVFDDSFDSLSLKSLIYFKLKDYKALLYVLDTYPVL
NEYNFLIKLLHYGKFEGQEDELSYFQNYNLGVFYFGLKDYEKSLSCFLKANKQHPSLIQAINNAAILFEILGRKDEAIQM
IVKAVDVDKNNALVKLNAWFLKNNCIFKDAKPFEIDESFKEANLSLIVNYLMYYLYFIGEISGAIKLSEKFLTDSSYSKY
IWHNRATILHKIGNMTQATKSYVKAILSFPNIYTIYNMHIATIELLNFSPKRAIDRMLLDYPNMDLVYFYAFLFFLRNRE
LEDAHFYLKKLCEIKPDIYSAFLNLLESREDILIEELLDEFAVFLKGKWTLEYLFFIDNSLNLKDPVFVFDYNTRLCPYI
WKIRDEHIELRASNNEVELAEKIFLDELTRIKLDVAIKEIRDLIDAYRDFRINY
>Mature_454_residues
MKRLFQKRFLSDLWSFLSNMNSINFEQALELYKKGDFKNALLNLDVFDDSFDSLSLKSLIYFKLKDYKALLYVLDTYPVL
NEYNFLIKLLHYGKFEGQEDELSYFQNYNLGVFYFGLKDYEKSLSCFLKANKQHPSLIQAINNAAILFEILGRKDEAIQM
IVKAVDVDKNNALVKLNAWFLKNNCIFKDAKPFEIDESFKEANLSLIVNYLMYYLYFIGEISGAIKLSEKFLTDSSYSKY
IWHNRATILHKIGNMTQATKSYVKAILSFPNIYTIYNMHIATIELLNFSPKRAIDRMLLDYPNMDLVYFYAFLFFLRNRE
LEDAHFYLKKLCEIKPDIYSAFLNLLESREDILIEELLDEFAVFLKGKWTLEYLFFIDNSLNLKDPVFVFDYNTRLCPYI
WKIRDEHIELRASNNEVELAEKIFLDELTRIKLDVAIKEIRDLIDAYRDFRINY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53921; Mature: 53921

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLFQKRFLSDLWSFLSNMNSINFEQALELYKKGDFKNALLNLDVFDDSFDSLSLKSLI
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHH
YFKLKDYKALLYVLDTYPVLNEYNFLIKLLHYGKFEGQEDELSYFQNYNLGVFYFGLKDY
EEEEHHHHEEHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEEHHHH
EKSLSCFLKANKQHPSLIQAINNAAILFEILGRKDEAIQMIVKAVDVDKNNALVKLNAWF
HHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEE
LKNNCIFKDAKPFEIDESFKEANLSLIVNYLMYYLYFIGEISGAIKLSEKFLTDSSYSKY
EECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IWHNRATILHKIGNMTQATKSYVKAILSFPNIYTIYNMHIATIELLNFSPKRAIDRMLLD
HHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEHEEEEEEECCCHHHHHHHHHHC
YPNMDLVYFYAFLFFLRNRELEDAHFYLKKLCEIKPDIYSAFLNLLESREDILIEELLDE
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHH
FAVFLKGKWTLEYLFFIDNSLNLKDPVFVFDYNTRLCPYIWKIRDEHIELRASNNEVELA
HHHHHCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHEECCEEEEEECCCHHHHH
EKIFLDELTRIKLDVAIKEIRDLIDAYRDFRINY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRLFQKRFLSDLWSFLSNMNSINFEQALELYKKGDFKNALLNLDVFDDSFDSLSLKSLI
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHH
YFKLKDYKALLYVLDTYPVLNEYNFLIKLLHYGKFEGQEDELSYFQNYNLGVFYFGLKDY
EEEEHHHHEEHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEEHHHH
EKSLSCFLKANKQHPSLIQAINNAAILFEILGRKDEAIQMIVKAVDVDKNNALVKLNAWF
HHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEEE
LKNNCIFKDAKPFEIDESFKEANLSLIVNYLMYYLYFIGEISGAIKLSEKFLTDSSYSKY
EECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IWHNRATILHKIGNMTQATKSYVKAILSFPNIYTIYNMHIATIELLNFSPKRAIDRMLLD
HHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEHEEEEEEECCCHHHHHHHHHHC
YPNMDLVYFYAFLFFLRNRELEDAHFYLKKLCEIKPDIYSAFLNLLESREDILIEELLDE
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHH
FAVFLKGKWTLEYLFFIDNSLNLKDPVFVFDYNTRLCPYIWKIRDEHIELRASNNEVELA
HHHHHCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHEECCEEEEEECCCHHHHH
EKIFLDELTRIKLDVAIKEIRDLIDAYRDFRINY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA