Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918323
Identifier: 187918323
GI number: 187918323
Start: 482557
End: 484074
Strand: Direct
Name: 187918323
Synonym: BH0458
Alternate gene names: NA
Gene position: 482557-484074 (Clockwise)
Preceding gene: 187918321
Following gene: 187918324
Centisome position: 52.32
GC content: 32.02
Gene sequence:
>1518_bases ATGAGATTGATTTTTATATTTGCGCTGTTTTGTTCGTGTATTTCTAGTGTTTTTTCTCAGGAACTTAAGTTGATTCTTGA TTCTAAGGATGGATTTAAATTTATTCAGGAAGCCCATAACGTTAGCTTTACAAAAGGCAATAGAGATGTTCTTGGGATTT ATTTGGGTAGATATAAGGGAGCTTTAGATTTTAATAGTGTTGATTTTAGATTAGAAATAGAAAAAGACAATATTGTTAAG GATGCTGCTTTAAACTATTTTGTTGATTCAAGCAATGCAAAGATTTCAAATTCTTTTTATAATATTGCAGGGAATTCTTT AATTTTTTATTCAAGTCGAAATACTATTAAGTTTAAACCATTAACAAAAAAGGCTTTCTTTTATTCAGGTAATGTAATTT CTGATTTTACTATCCAGTTTTGGGCATACCGTTCTACTTCTGTTACCGGAGAGGTTATTGTAAGTTGGAACGGGTATAAG AATATTAAAGGTGTTTGGCTAGATCAAGCCATTCGGTTAGAGAGTGAAGGCGGAACTTTTGTTTGGAATTTTAATAATGT GTTTTTAAACAATAATGGAGAACCGATTAAGATTAAGCTAAAGAGCGATGATGATTTTATTCCAAAAGAGTGGCATTTGC ATACTGTGAGGTATAGGCAAAAAGATGGGTTATTGGAATATTTGATAGACTCTAAGCCCCAGGCTATAGAGTATGTGACT GCTGACAAGAGAGAAGGTTTTGGCTATTTGTTAAATATTGGTAATTTCATTGATTTTGCATTGGGACAGTATTTTACAGG GGCTATTGAGAATTTTGAAATTCATAAAAGTTTTGAAGACGTAAATAGTGCTTTCTTTTCAAGAGATAAGGGATATATTA TTACAGAACCAATTAAGCTATCTAAGGACTATTCTCAAATTTTATCTATTGAATTTGATAGCGTAAAGCCAAAAGACACA GATATTTTTTATTATTATAGGTTGGATAATAAGGTGTTTTATGAAACAGGTAAGAATGGAGAGATAAAAAAGAATTTAAC AGGAGATTGGATTCATTTTGATCCTAAAAATGGATTTCCTAAGTTTGATGTATCAAAATATATTCAAATTAAGGTGGAAT TTTATCCAAGTGGTGATCCTGTGGAGAGTCCGGTTCTTTATGGCATGATTGTTACTTATATACCTGAGGCCGCACCTTTT CCGCCGCTAATAACAAAAGCTGTCCCAGGATCTGGTGAGATATTGATTGAATGGTTTCCAGTTATTAATAGTAATATTGG TGGCTATTATATTTATATTGGCGTTAGTCCTGGTAATTATCATGGTAAAGCCGGAAGTATTTTTACATCTCCTATTGATG TTGGTAATCAGACTTCTTTTAGAATTACAGGTCTTGAGAATGGAAGGCTTTATTATGTTAGTGTTGCTTCTTATAATTTA GACAAGAGTGTAAATGAAGCGTCTTTTTCAAAAGAGATTTCTGTCAGACCTATGGAGTTTTTTGAGCAATATGAATAG
Upstream 100 bases:
>100_bases TTAAATAATCATTTTTCTTTTTGTGATATAATATTATATCATATTTGAATCGTTGTATATTTTTTAATTCTTTTTCTGTT GAAAAAGATGAAGGTCTGTA
Downstream 100 bases:
>100_bases TATTAATTTTGAGCAAGCCTTAGAGCTTTATAAAAAGGGCGATTTTAAGAATGCTCTTTTAAATCTTGATGTTTTTGATG ATAGTTTTGATTCTCTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Fibronectin Type III Domain Protein
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MRLIFIFALFCSCISSVFSQELKLILDSKDGFKFIQEAHNVSFTKGNRDVLGIYLGRYKGALDFNSVDFRLEIEKDNIVK DAALNYFVDSSNAKISNSFYNIAGNSLIFYSSRNTIKFKPLTKKAFFYSGNVISDFTIQFWAYRSTSVTGEVIVSWNGYK NIKGVWLDQAIRLESEGGTFVWNFNNVFLNNNGEPIKIKLKSDDDFIPKEWHLHTVRYRQKDGLLEYLIDSKPQAIEYVT ADKREGFGYLLNIGNFIDFALGQYFTGAIENFEIHKSFEDVNSAFFSRDKGYIITEPIKLSKDYSQILSIEFDSVKPKDT DIFYYYRLDNKVFYETGKNGEIKKNLTGDWIHFDPKNGFPKFDVSKYIQIKVEFYPSGDPVESPVLYGMIVTYIPEAAPF PPLITKAVPGSGEILIEWFPVINSNIGGYYIYIGVSPGNYHGKAGSIFTSPIDVGNQTSFRITGLENGRLYYVSVASYNL DKSVNEASFSKEISVRPMEFFEQYE
Sequences:
>Translated_505_residues MRLIFIFALFCSCISSVFSQELKLILDSKDGFKFIQEAHNVSFTKGNRDVLGIYLGRYKGALDFNSVDFRLEIEKDNIVK DAALNYFVDSSNAKISNSFYNIAGNSLIFYSSRNTIKFKPLTKKAFFYSGNVISDFTIQFWAYRSTSVTGEVIVSWNGYK NIKGVWLDQAIRLESEGGTFVWNFNNVFLNNNGEPIKIKLKSDDDFIPKEWHLHTVRYRQKDGLLEYLIDSKPQAIEYVT ADKREGFGYLLNIGNFIDFALGQYFTGAIENFEIHKSFEDVNSAFFSRDKGYIITEPIKLSKDYSQILSIEFDSVKPKDT DIFYYYRLDNKVFYETGKNGEIKKNLTGDWIHFDPKNGFPKFDVSKYIQIKVEFYPSGDPVESPVLYGMIVTYIPEAAPF PPLITKAVPGSGEILIEWFPVINSNIGGYYIYIGVSPGNYHGKAGSIFTSPIDVGNQTSFRITGLENGRLYYVSVASYNL DKSVNEASFSKEISVRPMEFFEQYE >Mature_505_residues MRLIFIFALFCSCISSVFSQELKLILDSKDGFKFIQEAHNVSFTKGNRDVLGIYLGRYKGALDFNSVDFRLEIEKDNIVK DAALNYFVDSSNAKISNSFYNIAGNSLIFYSSRNTIKFKPLTKKAFFYSGNVISDFTIQFWAYRSTSVTGEVIVSWNGYK NIKGVWLDQAIRLESEGGTFVWNFNNVFLNNNGEPIKIKLKSDDDFIPKEWHLHTVRYRQKDGLLEYLIDSKPQAIEYVT ADKREGFGYLLNIGNFIDFALGQYFTGAIENFEIHKSFEDVNSAFFSRDKGYIITEPIKLSKDYSQILSIEFDSVKPKDT DIFYYYRLDNKVFYETGKNGEIKKNLTGDWIHFDPKNGFPKFDVSKYIQIKVEFYPSGDPVESPVLYGMIVTYIPEAAPF PPLITKAVPGSGEILIEWFPVINSNIGGYYIYIGVSPGNYHGKAGSIFTSPIDVGNQTSFRITGLENGRLYYVSVASYNL DKSVNEASFSKEISVRPMEFFEQYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57739; Mature: 57739
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIFIFALFCSCISSVFSQELKLILDSKDGFKFIQEAHNVSFTKGNRDVLGIYLGRYKG CEEEEEHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCEEECCCCEEEEEEEECCCC ALDFNSVDFRLEIEKDNIVKDAALNYFVDSSNAKISNSFYNIAGNSLIFYSSRNTIKFKP CCCCCCEEEEEEECCCCCCHHCEEEEEEECCCCEEECCEEEECCCEEEEEECCCEEEEEE LTKKAFFYSGNVISDFTIQFWAYRSTSVTGEVIVSWNGYKNIKGVWLDQAIRLESEGGTF CCCEEEEEECCEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCEE VWNFNNVFLNNNGEPIKIKLKSDDDFIPKEWHLHTVRYRQKDGLLEYLIDSKPQAIEYVT EEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCHHHHHHCCCCCEEEEEE ADKREGFGYLLNIGNFIDFALGQYFTGAIENFEIHKSFEDVNSAFFSRDKGYIITEPIKL CCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCEEEECCEEC SKDYSQILSIEFDSVKPKDTDIFYYYRLDNKVFYETGKNGEIKKNLTGDWIHFDPKNGFP CCCCHHEEEEEECCCCCCCCEEEEEEEECCEEEEEECCCCCEEECCCCCEEEECCCCCCC KFDVSKYIQIKVEFYPSGDPVESPVLYGMIVTYIPEAAPFPPLITKAVPGSGEILIEWFP CCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEEEEE VINSNIGGYYIYIGVSPGNYHGKAGSIFTSPIDVGNQTSFRITGLENGRLYYVSVASYNL EECCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCEEEEEEEEEECC DKSVNEASFSKEISVRPMEFFEQYE CCCCCCCCCCCEECCCHHHHHHCCC >Mature Secondary Structure MRLIFIFALFCSCISSVFSQELKLILDSKDGFKFIQEAHNVSFTKGNRDVLGIYLGRYKG CEEEEEHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCEEECCCCEEEEEEEECCCC ALDFNSVDFRLEIEKDNIVKDAALNYFVDSSNAKISNSFYNIAGNSLIFYSSRNTIKFKP CCCCCCEEEEEEECCCCCCHHCEEEEEEECCCCEEECCEEEECCCEEEEEECCCEEEEEE LTKKAFFYSGNVISDFTIQFWAYRSTSVTGEVIVSWNGYKNIKGVWLDQAIRLESEGGTF CCCEEEEEECCEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCEE VWNFNNVFLNNNGEPIKIKLKSDDDFIPKEWHLHTVRYRQKDGLLEYLIDSKPQAIEYVT EEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCHHHHHHCCCCCEEEEEE ADKREGFGYLLNIGNFIDFALGQYFTGAIENFEIHKSFEDVNSAFFSRDKGYIITEPIKL CCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCEEEECCEEC SKDYSQILSIEFDSVKPKDTDIFYYYRLDNKVFYETGKNGEIKKNLTGDWIHFDPKNGFP CCCCHHEEEEEECCCCCCCCEEEEEEEECCEEEEEECCCCCEEECCCCCEEEECCCCCCC KFDVSKYIQIKVEFYPSGDPVESPVLYGMIVTYIPEAAPFPPLITKAVPGSGEILIEWFP CCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEEEEE VINSNIGGYYIYIGVSPGNYHGKAGSIFTSPIDVGNQTSFRITGLENGRLYYVSVASYNL EECCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCEEEEEEEEEECC DKSVNEASFSKEISVRPMEFFEQYE CCCCCCCCCCCEECCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA