Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918189
Identifier: 187918189
GI number: 187918189
Start: 325462
End: 326145
Strand: Direct
Name: 187918189
Synonym: BH0315
Alternate gene names: NA
Gene position: 325462-326145 (Clockwise)
Preceding gene: 187918188
Following gene: 187918195
Centisome position: 35.29
GC content: 23.39
Gene sequence:
>684_bases ATGAAAAAATATGCAATAATTCTAGTCTGGATGAACATCATTGCTCCTATTTATGCAACAATTCCTACAGAAGATATAAA TAGCAATAAAATAATAGATGAGCTTTATACAAAATCAATATTACTCAAAGAGCTAAAAAAATATAACCAATCTAAATCAT TATTAATGCAAATTATAAATAAAGATCCAAAACAAGTTGATGCATATTTACTGATTGCAGAATTAGAATACTTGATGAAT AACTGGTTGCAAGCAATAGAACAAACAAAAACTTATCTACAAATAATTGATTTTAAAGATACAAAAAATTACCTTGATAT TTCATGGGCATATTTTCTCATTGGAGAGTCAAGAAACTCAATGGACTATATAATTCAATTTATTCAAGATAATAAAGAAT TACTAAATACTAACATATACATATTAATTGACACTATCTTAAAAAAAGGATTTTACCACTTCATACAAGATGAAGATTTA ATGTTTAATCTAATAATTACTACTATTTTTCAAATAGAAACATATGATGACACCATATTCACAATTTTTCTAAACAATTT AGCTATCATCAAACAAATTCCTTTTTATGAATTTAATAAAATTAAGATCAAAGACCTAGAATTACAAATTAAGACCTTAA AAAAGATTAAAAACTCAATAAATGGTATTACTAAAATAACTTAG
Upstream 100 bases:
>100_bases ACCTTAATAAATTTATAGAAGAGTTTAACTCATACGCATTGATCAACAAATATAAAGATATGATAATGGACATTGTAGAG AAAATAAAAGAGGAAAATTT
Downstream 100 bases:
>100_bases TTTTTCTAAAAAGTGCAACAAATATATTAATTAATATAGCCATATAAAAGGGCAATGAAAGGGCAAAATAAGAATTAACA TAATCTTGAAAATTGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKKYAIILVWMNIIAPIYATIPTEDINSNKIIDELYTKSILLKELKKYNQSKSLLMQIINKDPKQVDAYLLIAELEYLMN NWLQAIEQTKTYLQIIDFKDTKNYLDISWAYFLIGESRNSMDYIIQFIQDNKELLNTNIYILIDTILKKGFYHFIQDEDL MFNLIITTIFQIETYDDTIFTIFLNNLAIIKQIPFYEFNKIKIKDLELQIKTLKKIKNSINGITKIT
Sequences:
>Translated_227_residues MKKYAIILVWMNIIAPIYATIPTEDINSNKIIDELYTKSILLKELKKYNQSKSLLMQIINKDPKQVDAYLLIAELEYLMN NWLQAIEQTKTYLQIIDFKDTKNYLDISWAYFLIGESRNSMDYIIQFIQDNKELLNTNIYILIDTILKKGFYHFIQDEDL MFNLIITTIFQIETYDDTIFTIFLNNLAIIKQIPFYEFNKIKIKDLELQIKTLKKIKNSINGITKIT >Mature_227_residues MKKYAIILVWMNIIAPIYATIPTEDINSNKIIDELYTKSILLKELKKYNQSKSLLMQIINKDPKQVDAYLLIAELEYLMN NWLQAIEQTKTYLQIIDFKDTKNYLDISWAYFLIGESRNSMDYIIQFIQDNKELLNTNIYILIDTILKKGFYHFIQDEDL MFNLIITTIFQIETYDDTIFTIFLNNLAIIKQIPFYEFNKIKIKDLELQIKTLKKIKNSINGITKIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26968; Mature: 26968
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYAIILVWMNIIAPIYATIPTEDINSNKIIDELYTKSILLKELKKYNQSKSLLMQIIN CCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC KDPKQVDAYLLIAELEYLMNNWLQAIEQTKTYLQIIDFKDTKNYLDISWAYFLIGESRNS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEEEECCCCC MDYIIQFIQDNKELLNTNIYILIDTILKKGFYHFIQDEDLMFNLIITTIFQIETYDDTIF HHHHHHHHHCCHHHHCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCEEE TIFLNNLAIIKQIPFYEFNKIKIKDLELQIKTLKKIKNSINGITKIT EHHHHCHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKYAIILVWMNIIAPIYATIPTEDINSNKIIDELYTKSILLKELKKYNQSKSLLMQIIN CCCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC KDPKQVDAYLLIAELEYLMNNWLQAIEQTKTYLQIIDFKDTKNYLDISWAYFLIGESRNS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEEEEEECCCCC MDYIIQFIQDNKELLNTNIYILIDTILKKGFYHFIQDEDLMFNLIITTIFQIETYDDTIF HHHHHHHHHCCHHHHCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCEEE TIFLNNLAIIKQIPFYEFNKIKIKDLELQIKTLKKIKNSINGITKIT EHHHHCHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA