Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is 187918195

Identifier: 187918195

GI number: 187918195

Start: 332418

End: 333572

Strand: Direct

Name: 187918195

Synonym: BH0323

Alternate gene names: NA

Gene position: 332418-333572 (Clockwise)

Preceding gene: 187918189

Following gene: 187918196

Centisome position: 36.04

GC content: 32.99

Gene sequence:

>1155_bases
ATGCAATCAATATCACATAAGAAGGATGTATTTATGATAAAAAAAAGCAAGTTATTATTTTTAATGTTATCCGTATTTGC
TCTTTCCCTGATTTCATGTGAAACCCCGCCAGAAGATACAAAGAGTGCAAACTCTAAAATCTTAATTAAGGAAACTGGAG
ATATAAAAAAAGACATTGAAGAGATGAAAAACGGTGTCATAAGAGAGCGGGGCAATCTTTTCTACTCTAAAGAATTTAAT
GAAGCTGAAAAGATTGAAAGAGATATGAAAGCAAAATTTGCAAAGGGGATGATCAAACAAGGCAATGAAGTTGCACTAAA
AGCATTAGAAAGGTACAGAAATATCGTAAGAGATGTAACGGAAAAAAAAGAAAAAATAAACTACTTGAAAGAAAATATTG
AAAAATATTTGAATGATGCTGAAGTTAATGAAGCATACATATGGATCCCATTAGAAATCGATGAAGTAAATAACTTATAT
TTTGAAGCAACAAGAAAATACAAAATGTATGACATCGAAAGTTCTCTTGGAATGTACAGTAAAACATTTAATAAGGCACA
ACAAACTGCTAAGAAGGCAAAAGAAGCAAGGGCTCTTAAGGAAACGGAAGAGAGAATGTATAAACAATTAAAAGCACTGG
AAGCTGCTTCCGAGCTCCCCATTTACAGCAACAATAGGCTCATTAAACCATCACCATGGAATGGAAGAGCTCTACTTAAG
GATAAAGGCGAACGCATAAACCTTCTAGACTCACAAGGCAAGCCTTACTTACTTGGACAAATGGATGCATTAGTACTTGC
TTATGAAGAGAAAGCTGAAAACGTAGAAAAATCAGACTCAAATAAATTTAAAACACTTCAGCTCATTGAAAAAGCCAGAC
AACTATGGGAACAAGGACTTGAGGCTAAGAGTCTTAATAATCTTAGACTTGCAAATGAATTATTTTTAGATTCTGCAAGA
TACCTAAAGGCTTATCAAAGTCACTCAAGCAAGGAACTATATATAGTTAAAATTGGAAATACCTTATGGGGCATTTCTAA
GAAATTGTATAACGACCCTTACTTATGGCCAAAAATTTGGTTTGCCAACAGACAAAAAATTCAGAATCCAGATTTAATAC
ATGCAAATTGGAAGATAATAATTCCTTCTAAATAA

Upstream 100 bases:

>100_bases
AAAAAAATTGTATAATGTCAAATTGTGTAATAATATACTAATTATAGGCTTTATGCAAAGATAAAAGAATTGATGTCTAA
AAAGCAAAGTTCTTAATTTT

Downstream 100 bases:

>100_bases
AACAAAAAAAGAAAACAAGCATAAGCTTGTTTTCTTTTTTTATATATAATAAAATCAATTTAAATAACTTTTTTACAAAA
TAAGAGCATAAAAAATGAAA

Product: hypothetical membrane associated protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MQSISHKKDVFMIKKSKLLFLMLSVFALSLISCETPPEDTKSANSKILIKETGDIKKDIEEMKNGVIRERGNLFYSKEFN
EAEKIERDMKAKFAKGMIKQGNEVALKALERYRNIVRDVTEKKEKINYLKENIEKYLNDAEVNEAYIWIPLEIDEVNNLY
FEATRKYKMYDIESSLGMYSKTFNKAQQTAKKAKEARALKETEERMYKQLKALEAASELPIYSNNRLIKPSPWNGRALLK
DKGERINLLDSQGKPYLLGQMDALVLAYEEKAENVEKSDSNKFKTLQLIEKARQLWEQGLEAKSLNNLRLANELFLDSAR
YLKAYQSHSSKELYIVKIGNTLWGISKKLYNDPYLWPKIWFANRQKIQNPDLIHANWKIIIPSK

Sequences:

>Translated_384_residues
MQSISHKKDVFMIKKSKLLFLMLSVFALSLISCETPPEDTKSANSKILIKETGDIKKDIEEMKNGVIRERGNLFYSKEFN
EAEKIERDMKAKFAKGMIKQGNEVALKALERYRNIVRDVTEKKEKINYLKENIEKYLNDAEVNEAYIWIPLEIDEVNNLY
FEATRKYKMYDIESSLGMYSKTFNKAQQTAKKAKEARALKETEERMYKQLKALEAASELPIYSNNRLIKPSPWNGRALLK
DKGERINLLDSQGKPYLLGQMDALVLAYEEKAENVEKSDSNKFKTLQLIEKARQLWEQGLEAKSLNNLRLANELFLDSAR
YLKAYQSHSSKELYIVKIGNTLWGISKKLYNDPYLWPKIWFANRQKIQNPDLIHANWKIIIPSK
>Mature_384_residues
MQSISHKKDVFMIKKSKLLFLMLSVFALSLISCETPPEDTKSANSKILIKETGDIKKDIEEMKNGVIRERGNLFYSKEFN
EAEKIERDMKAKFAKGMIKQGNEVALKALERYRNIVRDVTEKKEKINYLKENIEKYLNDAEVNEAYIWIPLEIDEVNNLY
FEATRKYKMYDIESSLGMYSKTFNKAQQTAKKAKEARALKETEERMYKQLKALEAASELPIYSNNRLIKPSPWNGRALLK
DKGERINLLDSQGKPYLLGQMDALVLAYEEKAENVEKSDSNKFKTLQLIEKARQLWEQGLEAKSLNNLRLANELFLDSAR
YLKAYQSHSSKELYIVKIGNTLWGISKKLYNDPYLWPKIWFANRQKIQNPDLIHANWKIIIPSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44773; Mature: 44773

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSISHKKDVFMIKKSKLLFLMLSVFALSLISCETPPEDTKSANSKILIKETGDIKKDIE
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHH
EMKNGVIRERGNLFYSKEFNEAEKIERDMKAKFAKGMIKQGNEVALKALERYRNIVRDVT
HHHCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EKKEKINYLKENIEKYLNDAEVNEAYIWIPLEIDEVNNLYFEATRKYKMYDIESSLGMYS
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHEEHHCCEEEEECHHHHHHHH
KTFNKAQQTAKKAKEARALKETEERMYKQLKALEAASELPIYSNNRLIKPSPWNGRALLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEECCCCCCCCCCCC
DKGERINLLDSQGKPYLLGQMDALVLAYEEKAENVEKSDSNKFKTLQLIEKARQLWEQGL
CCCCEEEEECCCCCCEEEECHHHHHEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
EAKSLNNLRLANELFLDSARYLKAYQSHSSKELYIVKIGNTLWGISKKLYNDPYLWPKIW
CHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCHHE
FANRQKIQNPDLIHANWKIIIPSK
ECCCCCCCCCCEEECCEEEEECCC
>Mature Secondary Structure
MQSISHKKDVFMIKKSKLLFLMLSVFALSLISCETPPEDTKSANSKILIKETGDIKKDIE
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHH
EMKNGVIRERGNLFYSKEFNEAEKIERDMKAKFAKGMIKQGNEVALKALERYRNIVRDVT
HHHCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EKKEKINYLKENIEKYLNDAEVNEAYIWIPLEIDEVNNLYFEATRKYKMYDIESSLGMYS
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHEEHHCCEEEEECHHHHHHHH
KTFNKAQQTAKKAKEARALKETEERMYKQLKALEAASELPIYSNNRLIKPSPWNGRALLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEECCCCCCCCCCCC
DKGERINLLDSQGKPYLLGQMDALVLAYEEKAENVEKSDSNKFKTLQLIEKARQLWEQGL
CCCCEEEEECCCCCCEEEECHHHHHEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
EAKSLNNLRLANELFLDSARYLKAYQSHSSKELYIVKIGNTLWGISKKLYNDPYLWPKIW
CHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCHHE
FANRQKIQNPDLIHANWKIIIPSK
ECCCCCCCCCCEEECCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA