| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is folA [H]
Identifier: 187736510
GI number: 187736510
Start: 2466797
End: 2467276
Strand: Reverse
Name: folA [H]
Synonym: Amuc_2031
Alternate gene names: 187736510
Gene position: 2467276-2466797 (Counterclockwise)
Preceding gene: 187736511
Following gene: 187736506
Centisome position: 92.61
GC content: 56.67
Gene sequence:
>480_bases ATGTCACAACCCGTTACTTATACAGGAGTGGTCGCCATGGCTCCCGACCGCGGCATTGGTTACCGGGGGGCGCTCCCCTG GCATTTGCCGGACGACCTCAAGACGTTCAAGCGCATTACGACGGGGCACCCCGTGCTGATGGGCCGGAAAACGTATGAGA GCATAGGCAGGCCTCTTCCCGGCAGGCAGAACATCGTGCTGACCCGTGACCCGGCGTGGACGGCGGAAGGCGTTCAGGTG GTTCATTCCGCAGGGGAGTTGGAATGTCTGGAATTGATGGACCCGGAAATCATGGTGATCGGGGGTGCGGAGATTTTTTC CCTGATGATGCCGGCCATGTCCCGCATGTGGGTTTCCAAAGTAAAGGGGGAATATCCGGCGGATACTTTTCTTCCTCCGT TTGAGAACCGGCTGGAGCGTGCCGTCCTGAAGGAACATTTTGAAGATTTTGACCTGTATTTGTACGAGCAGGTCAAATAG
Upstream 100 bases:
>100_bases GACGGATTCCATTATGAAGATTTTGAGCTCGTGGGGTATGATCCCCTGCCGCACATCAAGGCTCCCATCTCCGTTTAGAA CATTCATCCCTTAATCCATC
Downstream 100 bases:
>100_bases CCGCTCTTGTCCGTAACTCCGCGGGAGGCGCTGAAGCATAAAAAAGAAAAAGACGGGGCGGCCAAGGCCGCCCCGTCCTT CATGGAGCAGTCTTCCTTTA
Product: Dihydrofolate reductase
Products: NA
Alternate protein names: DHFR [H]
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSQPVTYTGVVAMAPDRGIGYRGALPWHLPDDLKTFKRITTGHPVLMGRKTYESIGRPLPGRQNIVLTRDPAWTAEGVQV VHSAGELECLELMDPEIMVIGGAEIFSLMMPAMSRMWVSKVKGEYPADTFLPPFENRLERAVLKEHFEDFDLYLYEQVK
Sequences:
>Translated_159_residues MSQPVTYTGVVAMAPDRGIGYRGALPWHLPDDLKTFKRITTGHPVLMGRKTYESIGRPLPGRQNIVLTRDPAWTAEGVQV VHSAGELECLELMDPEIMVIGGAEIFSLMMPAMSRMWVSKVKGEYPADTFLPPFENRLERAVLKEHFEDFDLYLYEQVK >Mature_158_residues SQPVTYTGVVAMAPDRGIGYRGALPWHLPDDLKTFKRITTGHPVLMGRKTYESIGRPLPGRQNIVLTRDPAWTAEGVQVV HSAGELECLELMDPEIMVIGGAEIFSLMMPAMSRMWVSKVKGEYPADTFLPPFENRLERAVLKEHFEDFDLYLYEQVK
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Escherichia coli, GI1786233, Length=142, Percent_Identity=42.9577464788732, Blast_Score=112, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17505899, Length=146, Percent_Identity=34.9315068493151, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324810, Length=149, Percent_Identity=36.241610738255, Blast_Score=74, Evalue=7e-15, Organism=Drosophila melanogaster, GI116008026, Length=143, Percent_Identity=34.2657342657343, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24647458, Length=143, Percent_Identity=34.2657342657343, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 17996; Mature: 17865
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPVTYTGVVAMAPDRGIGYRGALPWHLPDDLKTFKRITTGHPVLMGRKTYESIGRPLP CCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHHHHCCCCC GRQNIVLTRDPAWTAEGVQVVHSAGELECLELMDPEIMVIGGAEIFSLMMPAMSRMWVSK CCCCEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHH VKGEYPADTFLPPFENRLERAVLKEHFEDFDLYLYEQVK HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure SQPVTYTGVVAMAPDRGIGYRGALPWHLPDDLKTFKRITTGHPVLMGRKTYESIGRPLP CCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHHHHCCCCC GRQNIVLTRDPAWTAEGVQVVHSAGELECLELMDPEIMVIGGAEIFSLMMPAMSRMWVSK CCCCEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHH VKGEYPADTFLPPFENRLERAVLKEHFEDFDLYLYEQVK HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA