Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187736496
Identifier: 187736496
GI number: 187736496
Start: 2449761
End: 2450246
Strand: Direct
Name: 187736496
Synonym: Amuc_2017
Alternate gene names: NA
Gene position: 2449761-2450246 (Clockwise)
Preceding gene: 187736495
Following gene: 187736497
Centisome position: 91.95
GC content: 56.17
Gene sequence:
>486_bases ATGGAGGCAACCCATTTCAGCATGGCAAACTCCACTACCACGCAAAAACTCTGCAACTGGTTCATTCAGCAGGCGAACGC CAAGGAGCTCATCCTGACGCCCGTCAAACTGAACCATCTGGTCATTCTGGCGGACTGGTGGCATCTGCACCGGACTGGCG CTTTCCTGATCAATGAACGGGTGGAAGCCTGGCCTTCCGGTCCGGTACTTCCTTCCATTTATCATGAATACAAGGATCAG CCGCCCTACTCTTCCATAGAGCATCCCAGCCGCCGCCAGCCCCCTTTGGAGGAGGAAACGGACATTATCCCCTTTCTGGA GCATATCTGGAACGTCTATGGCAAATATACGGCCCAGCAGCTCGGACGCATCAACACCGCCCCGTCCTCCCCATGGAAGC AGTCCCAGGGCAAGCATGAACAGGCGCACCGCCAGCAAATCACGGAGGAGCACGTACAGGCGTACTTTAAAAGCCTGGCC GGATAG
Upstream 100 bases:
>100_bases GACCTGACGAATCCCGGCACAGCCATTTGCCTATGCCGACCGCCAGAGCGCCGGAACCGCAAGCGGATTTAGTGTTGAGA AATACCTGCGGCCTTTTATA
Downstream 100 bases:
>100_bases TTCCGGAAAAAACAGCCTGCCGCTTACCTGTACAGCCTTTTTCCAATCAAAACATATCTTTGAGTAAAAAAAAACTTGCA AAAAACGGCCTCTTCCGCTT
Product: phage-associated protein-like protein
Products: NA
Alternate protein names: Phage-Associated Protein-Like Protein
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MEATHFSMANSTTTQKLCNWFIQQANAKELILTPVKLNHLVILADWWHLHRTGAFLINERVEAWPSGPVLPSIYHEYKDQ PPYSSIEHPSRRQPPLEEETDIIPFLEHIWNVYGKYTAQQLGRINTAPSSPWKQSQGKHEQAHRQQITEEHVQAYFKSLA G
Sequences:
>Translated_161_residues MEATHFSMANSTTTQKLCNWFIQQANAKELILTPVKLNHLVILADWWHLHRTGAFLINERVEAWPSGPVLPSIYHEYKDQ PPYSSIEHPSRRQPPLEEETDIIPFLEHIWNVYGKYTAQQLGRINTAPSSPWKQSQGKHEQAHRQQITEEHVQAYFKSLA G >Mature_161_residues MEATHFSMANSTTTQKLCNWFIQQANAKELILTPVKLNHLVILADWWHLHRTGAFLINERVEAWPSGPVLPSIYHEYKDQ PPYSSIEHPSRRQPPLEEETDIIPFLEHIWNVYGKYTAQQLGRINTAPSSPWKQSQGKHEQAHRQQITEEHVQAYFKSLA G
Specific function: Unknown
COG id: COG3600
COG function: function code S; Uncharacterized phage-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18678; Mature: 18678
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEATHFSMANSTTTQKLCNWFIQQANAKELILTPVKLNHLVILADWWHLHRTGAFLINER CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECHHHHHHHHHHHHHHH VEAWPSGPVLPSIYHEYKDQPPYSSIEHPSRRQPPLEEETDIIPFLEHIWNVYGKYTAQQ HHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LGRINTAPSSPWKQSQGKHEQAHRQQITEEHVQAYFKSLAG HCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEATHFSMANSTTTQKLCNWFIQQANAKELILTPVKLNHLVILADWWHLHRTGAFLINER CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECHHHHHHHHHHHHHHH VEAWPSGPVLPSIYHEYKDQPPYSSIEHPSRRQPPLEEETDIIPFLEHIWNVYGKYTAQQ HHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LGRINTAPSSPWKQSQGKHEQAHRQQITEEHVQAYFKSLAG HCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA