Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736462

Identifier: 187736462

GI number: 187736462

Start: 2405050

End: 2405754

Strand: Reverse

Name: 187736462

Synonym: Amuc_1982

Alternate gene names: NA

Gene position: 2405754-2405050 (Counterclockwise)

Preceding gene: 187736463

Following gene: 187736461

Centisome position: 90.3

GC content: 53.19

Gene sequence:

>705_bases
ATGAGAAGAATCGCCTCTATTTCCATGTTGGCTGTGGTATCCGCGCTTTCCGCGAGTGCTGCTACTGTATTATTTGATTT
TAACAGTTCTTTGCTTCCGGAAACTCCCGCCAAGACTGTTTCTGTAACCGATTCCGGTTCCGGATTTGTTGCAACCCTGG
CTACGGCAGCCTCTTCCGCTAATCTGGGTTCTACTTCTTCCGCCGCTTCTGGGGACTGGGTTTCCTCCGGAACTTCTTTT
GATACACAGGGATTGGATTCTTTTATGGAAAACCAGATCTCTTTCGGAAACTCTTGGCAGACCTTTATCTCCGGCCCCAA
AGGAGCTTCTCTTTCCCTGACTATTTCCGGTCTGGTGGCTGGTGCTTCCTACCAGATTGCCCTTGTTACCGGGTGTCCTT
TTGAGGGGGCCGGTGCCTGGAATTCCCTGGTGACTTCCAATACCTACGACAGCGCGGCTCCTTCCATAGGTGCGAACTCT
CAGACAATTCAGGCCCGGACTCCCACGGGGTACACCATTAGTGACGTTATTGCCAATGAAGATGGCGAAATTATTCTGAC
GGTGAATACTCCGGGTTCCTCCCACACGCCTACGTTCAATGCTCTGGCTATTTCTGGAGAAACAGCCAGCGTTCCGGAAC
CGGCCACGGCGTCCCTGAGTCTGCTGGGGCTGACGGCCCTGATGGCTCGCCGCCGAAGAGCTTGA

Upstream 100 bases:

>100_bases
TGTTCCGTCCGCATAACCCCCTCTTTTTTTTAAAAAATAATTTGACACCGGATAGTCAATCCGTTACTGACTGAAATCAG
TTGCTGTTTACCTGCTATTT

Downstream 100 bases:

>100_bases
GAACCTCTTTTCCGGCAGTAAAAAATGTTGTTGCCTGCAAGGTCTAGCCTTGCAGGCGATTTTTTTAATGTCTCTGTTGA
TGAAGGAGGGCCGTCCGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRRIASISMLAVVSALSASAATVLFDFNSSLLPETPAKTVSVTDSGSGFVATLATAASSANLGSTSSAASGDWVSSGTSF
DTQGLDSFMENQISFGNSWQTFISGPKGASLSLTISGLVAGASYQIALVTGCPFEGAGAWNSLVTSNTYDSAAPSIGANS
QTIQARTPTGYTISDVIANEDGEIILTVNTPGSSHTPTFNALAISGETASVPEPATASLSLLGLTALMARRRRA

Sequences:

>Translated_234_residues
MRRIASISMLAVVSALSASAATVLFDFNSSLLPETPAKTVSVTDSGSGFVATLATAASSANLGSTSSAASGDWVSSGTSF
DTQGLDSFMENQISFGNSWQTFISGPKGASLSLTISGLVAGASYQIALVTGCPFEGAGAWNSLVTSNTYDSAAPSIGANS
QTIQARTPTGYTISDVIANEDGEIILTVNTPGSSHTPTFNALAISGETASVPEPATASLSLLGLTALMARRRRA
>Mature_234_residues
MRRIASISMLAVVSALSASAATVLFDFNSSLLPETPAKTVSVTDSGSGFVATLATAASSANLGSTSSAASGDWVSSGTSF
DTQGLDSFMENQISFGNSWQTFISGPKGASLSLTISGLVAGASYQIALVTGCPFEGAGAWNSLVTSNTYDSAAPSIGANS
QTIQARTPTGYTISDVIANEDGEIILTVNTPGSSHTPTFNALAISGETASVPEPATASLSLLGLTALMARRRRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23644; Mature: 23644

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIASISMLAVVSALSASAATVLFDFNSSLLPETPAKTVSVTDSGSGFVATLATAASSA
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEHHHCCC
NLGSTSSAASGDWVSSGTSFDTQGLDSFMENQISFGNSWQTFISGPKGASLSLTISGLVA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEEEEEE
GASYQIALVTGCPFEGAGAWNSLVTSNTYDSAAPSIGANSQTIQARTPTGYTISDVIANE
CCCEEEEEEECCCCCCCCCCHHHEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHEEECC
DGEIILTVNTPGSSHTPTFNALAISGETASVPEPATASLSLLGLTALMARRRRA
CCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRIASISMLAVVSALSASAATVLFDFNSSLLPETPAKTVSVTDSGSGFVATLATAASSA
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEHHHCCC
NLGSTSSAASGDWVSSGTSFDTQGLDSFMENQISFGNSWQTFISGPKGASLSLTISGLVA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEEEEEE
GASYQIALVTGCPFEGAGAWNSLVTSNTYDSAAPSIGANSQTIQARTPTGYTISDVIANE
CCCEEEEEEECCCCCCCCCCHHHEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHEEECC
DGEIILTVNTPGSSHTPTFNALAISGETASVPEPATASLSLLGLTALMARRRRA
CCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA