Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736430

Identifier: 187736430

GI number: 187736430

Start: 2366548

End: 2367162

Strand: Reverse

Name: 187736430

Synonym: Amuc_1948

Alternate gene names: NA

Gene position: 2367162-2366548 (Counterclockwise)

Preceding gene: 187736431

Following gene: 187736424

Centisome position: 88.85

GC content: 58.54

Gene sequence:

>615_bases
ATGTGCCGTTTGATTTTTGAAACCGTTAAATGGGAGAATGGCGCTCCCTGTCTGCTTCCCTGGCACCAGCGGAGGATGGA
GGCCGCCATCGGCGTTCATGGTTCGGACGGAGCTTCCGTCCCCGATCTGGCTTCCGTTCTTTCGGACTGTCCCGGCCCGG
AGGGCCGTGGTGTTTACAAATGCCATATCACGTATGATACGCGGGGAAGGGTGCGCCGCACCTCCTTTGAGCCCTACCGT
CCCCGGCAGGTGAAGACGCTGACGTGTGTGGAAATGCCCGGGCTGGATTACTCATGCAAGTGGGAGGATCGGACAGGGCT
TCTGGCGGCAGGGGCGGCGTTGGGCTGTGACGAAGAAGCGCTGATTCTCCGGAACGGGATGGTGACGGATACGCGGTACA
GCAACGTGGTGTTCGGGGACGGGTCTTTCTGGGTTACTCCGGAAACTTTCCTGCTCCCGGGAACCAAGCGCGCCTTCCTG
CTGTCCCGCGGAGACATTCAGGAATGTTCCGTAAGAGCGGAAGATATAGGCAAATTCCGCTTCTGTTCCCTGATTAATTC
CATGCTGGATCCCGGCGATGTGGTGGTGCGGACGGAGGATATTATCCTGTGTTGA

Upstream 100 bases:

>100_bases
ATGGAGGAGGATGAACGGGGAATGGTATACAAGAGCGGTGGAGGAATTACCGTCATGAGCCGGATGGAAGAGGAATACCA
GGAAGCTGTTGCCAAAGTTT

Downstream 100 bases:

>100_bases
GGGTGGAAAACGGATAGATTGTTTTATCCGGAACCCTCTGAATTTTGGTATTGAGGGCATAAAAAAGCGGCCGTTCCATG
GATATGGAATGACCGCCTGA

Product: hypothetical protein

Products: 4-aminobenzoate; pyruvate

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MCRLIFETVKWENGAPCLLPWHQRRMEAAIGVHGSDGASVPDLASVLSDCPGPEGRGVYKCHITYDTRGRVRRTSFEPYR
PRQVKTLTCVEMPGLDYSCKWEDRTGLLAAGAALGCDEEALILRNGMVTDTRYSNVVFGDGSFWVTPETFLLPGTKRAFL
LSRGDIQECSVRAEDIGKFRFCSLINSMLDPGDVVVRTEDIILC

Sequences:

>Translated_204_residues
MCRLIFETVKWENGAPCLLPWHQRRMEAAIGVHGSDGASVPDLASVLSDCPGPEGRGVYKCHITYDTRGRVRRTSFEPYR
PRQVKTLTCVEMPGLDYSCKWEDRTGLLAAGAALGCDEEALILRNGMVTDTRYSNVVFGDGSFWVTPETFLLPGTKRAFL
LSRGDIQECSVRAEDIGKFRFCSLINSMLDPGDVVVRTEDIILC
>Mature_204_residues
MCRLIFETVKWENGAPCLLPWHQRRMEAAIGVHGSDGASVPDLASVLSDCPGPEGRGVYKCHITYDTRGRVRRTSFEPYR
PRQVKTLTCVEMPGLDYSCKWEDRTGLLAAGAALGCDEEALILRNGMVTDTRYSNVVFGDGSFWVTPETFLLPGTKRAFL
LSRGDIQECSVRAEDIGKFRFCSLINSMLDPGDVVVRTEDIILC

Specific function: Unknown

COG id: COG0115

COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001544 [H]

Pfam domain/function: PF01063 Aminotran_4 [H]

EC number: 4.1.3.38

Molecular weight: Translated: 22685; Mature: 22685

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRLIFETVKWENGAPCLLPWHQRRMEAAIGVHGSDGASVPDLASVLSDCPGPEGRGVYK
CCEEEEEEECCCCCCCEEECHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCEEE
CHITYDTRGRVRRTSFEPYRPRQVKTLTCVEMPGLDYSCKWEDRTGLLAAGAALGCDEEA
EEEEECCCCCEEECCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCEEEECCCCCCCCCE
LILRNGMVTDTRYSNVVFGDGSFWVTPETFLLPGTKRAFLLSRGDIQECSVRAEDIGKFR
EEEECCEEECCCCCEEEEECCCEEECCCEEEECCCCEEEEEECCCHHHHEECHHHCCHHH
FCSLINSMLDPGDVVVRTEDIILC
HHHHHHHHCCCCCEEEEECEEEEC
>Mature Secondary Structure
MCRLIFETVKWENGAPCLLPWHQRRMEAAIGVHGSDGASVPDLASVLSDCPGPEGRGVYK
CCEEEEEEECCCCCCCEEECHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCEEE
CHITYDTRGRVRRTSFEPYRPRQVKTLTCVEMPGLDYSCKWEDRTGLLAAGAALGCDEEA
EEEEECCCCCEEECCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCEEEECCCCCCCCCE
LILRNGMVTDTRYSNVVFGDGSFWVTPETFLLPGTKRAFLLSRGDIQECSVRAEDIGKFR
EEEECCEEECCCCCEEEEECCCEEECCCEEEECCCCEEEEEECCCHHHHEECHHHCCHHH
FCSLINSMLDPGDVVVRTEDIILC
HHHHHHHHCCCCCEEEEECEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-amino-4-deoxychorismate

Specific reaction: 4-amino-4-deoxychorismate = 4-aminobenzoate + pyruvate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]