Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736415

Identifier: 187736415

GI number: 187736415

Start: 2345449

End: 2346867

Strand: Reverse

Name: 187736415

Synonym: Amuc_1933

Alternate gene names: NA

Gene position: 2346867-2345449 (Counterclockwise)

Preceding gene: 187736416

Following gene: 187736414

Centisome position: 88.09

GC content: 55.81

Gene sequence:

>1419_bases
ATGACAGCTTCATGCGTGAGCTGCCATGTAAACCGCGGCCGTGATTTCACGCCCCCCGTCCTCAGGACGAAAGAAGGCGA
GCCCGGGCCGGCTTACTATCTGGGCGGTGAAAAGGGAACGGTGTTTAATGCCACCAGTAAAGCGTTTGAGCAGGAATCGC
CGGCAATTACTGAAGCCGGCCTGACGAATCGTTTCAAGGCGGGCGAAATTATTTTTGAAGGGAACTTCGTACCCGTGAAG
CGCAATCGCTTCGGCGGTCTCGGCCCCACTTACATTAAGTCATCCTGTCTGGCCTGCCACCCCGGTTATGGCCGCGGACA
GCGCACCGGCAATTTTGACAGGCAGTACGGCAACGGTTATCTGGCCTTTGTACATAATCCCGATGGCACCCCAGTTAAGG
GGTACACGGGCATGCTGCAGACGAAAGCGGTTCCTCCTTTTGTGCCTTATGCCAAGGGGGTGAAAATAGAATGGCATGAT
TTTGTTGACCAGTACGGAAACAAATACCCGGACGGAACGCCCTACAATGCGGGCAAGCCGACGGAAGGCACGTTGACTTA
TCCCACGGCAGATGTGATTGAGCCGTTGCTTCCGCTTCCGGCCGATTACCGCGTGTCAATCGAATCAACAATCGGCATTT
ACGGAACGGGGCTGCTTGATGCCATCCGTGACGAGGATATTATTGCCGAATACAGGCGCCAGCAGAGCATGACAGGCCCG
GTGAAGGGGATTCCTGGCAAATGGATTGACGAGCCCGACGGTACCCGGCGCCTCGGAAAGTTCACGTGGGACTGCTCGCG
CGCCACACTGGAAAACGGTCCTGGCGCCAATGCGCTTTGGAACGTGACGAATGTAACGCGCAAGAACCGTCCGAACATCT
ACATGACGCCCGAATGGCTCGAAAAACAGAAGGAACTTGGCATTGATGTAAGCGGTCTTGAAGGCCCGCAGGAAGAGGAA
CTCTCAATGCAGCAGTATGAAGATTTCATGGTCTGGCATCGCGGGCTAGCCGTGCCTGCCGCCCGCAACCTGGACAAGCC
TGACGTGCGCCGCGGACAGGAACTCTTCAATAAACTGGGGTGTGCCGGTTGCCACAAGCCTGAATGGACAACGGGGGAAT
ATAAGCCGCTTCCCGGTTATGCAAACCAGACCATCCGCCCCTATACGGATATGCTGCGTCACGATATGGGGGAAATCAAC
CGCGGACGTTCTCGTTTCTGGCGTACGCCGCCCCTCTGGGGAAGGGGGCTGATGCACAAAACCGCCAATCATACAGATAT
GTTCCATGACCTGCGCGCCCGCGACTTTGAAGAGGCTATCCTGTGGCATTTCGGTGAAAGCGAATTCTCCCGTGAAATGT
TCCGCCATCTCTCCGCCGAAGAGCGCGGCCAACTGATTCAATTCCTGAAAGCACTTTAA

Upstream 100 bases:

>100_bases
GAATGCCGGCGTTTTGGGACATCCCCGTATTTCCGGACGCGCACTGATTAATCCGGCCCAGGGGAGTGCATCAAAATTTG
ACAATATCAAAGCCGAATAC

Downstream 100 bases:

>100_bases
AAAAATAATATACTCATGACCTGCAACTTGGAAAAAAACAAAGGTGTTTCCGTCAAGTCGCTCCCGCTGGGCGGCGAAGG
CGCATCTCTGCAATTCGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Exported Protein; Signal Peptide

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MTASCVSCHVNRGRDFTPPVLRTKEGEPGPAYYLGGEKGTVFNATSKAFEQESPAITEAGLTNRFKAGEIIFEGNFVPVK
RNRFGGLGPTYIKSSCLACHPGYGRGQRTGNFDRQYGNGYLAFVHNPDGTPVKGYTGMLQTKAVPPFVPYAKGVKIEWHD
FVDQYGNKYPDGTPYNAGKPTEGTLTYPTADVIEPLLPLPADYRVSIESTIGIYGTGLLDAIRDEDIIAEYRRQQSMTGP
VKGIPGKWIDEPDGTRRLGKFTWDCSRATLENGPGANALWNVTNVTRKNRPNIYMTPEWLEKQKELGIDVSGLEGPQEEE
LSMQQYEDFMVWHRGLAVPAARNLDKPDVRRGQELFNKLGCAGCHKPEWTTGEYKPLPGYANQTIRPYTDMLRHDMGEIN
RGRSRFWRTPPLWGRGLMHKTANHTDMFHDLRARDFEEAILWHFGESEFSREMFRHLSAEERGQLIQFLKAL

Sequences:

>Translated_472_residues
MTASCVSCHVNRGRDFTPPVLRTKEGEPGPAYYLGGEKGTVFNATSKAFEQESPAITEAGLTNRFKAGEIIFEGNFVPVK
RNRFGGLGPTYIKSSCLACHPGYGRGQRTGNFDRQYGNGYLAFVHNPDGTPVKGYTGMLQTKAVPPFVPYAKGVKIEWHD
FVDQYGNKYPDGTPYNAGKPTEGTLTYPTADVIEPLLPLPADYRVSIESTIGIYGTGLLDAIRDEDIIAEYRRQQSMTGP
VKGIPGKWIDEPDGTRRLGKFTWDCSRATLENGPGANALWNVTNVTRKNRPNIYMTPEWLEKQKELGIDVSGLEGPQEEE
LSMQQYEDFMVWHRGLAVPAARNLDKPDVRRGQELFNKLGCAGCHKPEWTTGEYKPLPGYANQTIRPYTDMLRHDMGEIN
RGRSRFWRTPPLWGRGLMHKTANHTDMFHDLRARDFEEAILWHFGESEFSREMFRHLSAEERGQLIQFLKAL
>Mature_471_residues
TASCVSCHVNRGRDFTPPVLRTKEGEPGPAYYLGGEKGTVFNATSKAFEQESPAITEAGLTNRFKAGEIIFEGNFVPVKR
NRFGGLGPTYIKSSCLACHPGYGRGQRTGNFDRQYGNGYLAFVHNPDGTPVKGYTGMLQTKAVPPFVPYAKGVKIEWHDF
VDQYGNKYPDGTPYNAGKPTEGTLTYPTADVIEPLLPLPADYRVSIESTIGIYGTGLLDAIRDEDIIAEYRRQQSMTGPV
KGIPGKWIDEPDGTRRLGKFTWDCSRATLENGPGANALWNVTNVTRKNRPNIYMTPEWLEKQKELGIDVSGLEGPQEEEL
SMQQYEDFMVWHRGLAVPAARNLDKPDVRRGQELFNKLGCAGCHKPEWTTGEYKPLPGYANQTIRPYTDMLRHDMGEINR
GRSRFWRTPPLWGRGLMHKTANHTDMFHDLRARDFEEAILWHFGESEFSREMFRHLSAEERGQLIQFLKAL

Specific function: Unknown

COG id: COG3488

COG function: function code C; Predicted thiol oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53209; Mature: 53077

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASCVSCHVNRGRDFTPPVLRTKEGEPGPAYYLGGEKGTVFNATSKAFEQESPAITEAG
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCHHHHHHHCCCCHHHCC
LTNRFKAGEIIFEGNFVPVKRNRFGGLGPTYIKSSCLACHPGYGRGQRTGNFDRQYGNGY
CCCCCCCCEEEECCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCCCCCHHCCCEE
LAFVHNPDGTPVKGYTGMLQTKAVPPFVPYAKGVKIEWHDFVDQYGNKYPDGTPYNAGKP
EEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCC
TEGTLTYPTADVIEPLLPLPADYRVSIESTIGIYGTGLLDAIRDEDIIAEYRRQQSMTGP
CCCEEECCCHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHHCCHHHHHHHHHHHCCCCC
VKGIPGKWIDEPDGTRRLGKFTWDCSRATLENGPGANALWNVTNVTRKNRPNIYMTPEWL
CCCCCCCCCCCCCCCHHHHCEEECCCHHHHCCCCCCCCEEECHHHHHCCCCCEEECHHHH
EKQKELGIDVSGLEGPQEEELSMQQYEDFMVWHRGLAVPAARNLDKPDVRRGQELFNKLG
HHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHC
CAGCHKPEWTTGEYKPLPGYANQTIRPYTDMLRHDMGEINRGRSRFWRTPPLWGRGLMHK
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHH
TANHTDMFHDLRARDFEEAILWHFGESEFSREMFRHLSAEERGQLIQFLKAL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TASCVSCHVNRGRDFTPPVLRTKEGEPGPAYYLGGEKGTVFNATSKAFEQESPAITEAG
CCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCHHHHHHHCCCCHHHCC
LTNRFKAGEIIFEGNFVPVKRNRFGGLGPTYIKSSCLACHPGYGRGQRTGNFDRQYGNGY
CCCCCCCCEEEECCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCCCCCHHCCCEE
LAFVHNPDGTPVKGYTGMLQTKAVPPFVPYAKGVKIEWHDFVDQYGNKYPDGTPYNAGKP
EEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCC
TEGTLTYPTADVIEPLLPLPADYRVSIESTIGIYGTGLLDAIRDEDIIAEYRRQQSMTGP
CCCEEECCCHHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHHCCHHHHHHHHHHHCCCCC
VKGIPGKWIDEPDGTRRLGKFTWDCSRATLENGPGANALWNVTNVTRKNRPNIYMTPEWL
CCCCCCCCCCCCCCCHHHHCEEECCCHHHHCCCCCCCCEEECHHHHHCCCCCEEECHHHH
EKQKELGIDVSGLEGPQEEELSMQQYEDFMVWHRGLAVPAARNLDKPDVRRGQELFNKLG
HHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHC
CAGCHKPEWTTGEYKPLPGYANQTIRPYTDMLRHDMGEINRGRSRFWRTPPLWGRGLMHK
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHH
TANHTDMFHDLRARDFEEAILWHFGESEFSREMFRHLSAEERGQLIQFLKAL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA