Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187736407

Identifier: 187736407

GI number: 187736407

Start: 2336696

End: 2337652

Strand: Reverse

Name: 187736407

Synonym: Amuc_1925

Alternate gene names: NA

Gene position: 2337652-2336696 (Counterclockwise)

Preceding gene: 187736408

Following gene: 187736403

Centisome position: 87.75

GC content: 58.52

Gene sequence:

>957_bases
ATGACCGTCTCCTCCGCGTCCGGTAAAGAAATTCACCCTCGTTTGCCCTGGGTGGAGATTGCACGGCTGCTGGCGACGCT
GGTGGTTATCATGCAGCACGTCCCTTCCATGGGGTTTCCTCCCAACCAATGGCTGATTGGTCCGGCGCTGGCGACGTTTT
TCCTGCTGGCGGGGTATTTTTCCGCCTCCGGCCTTGATGAACAGGGGGCCGGAACGTGGGCGGGGCGCCGCCTGCTGGTT
TTGCTGCGGCCTTATCTTTTCTGGTGCGCGGCCTATTGGCTGGCGGCGGGCATGCCTCTTGCCCCTGGTTCTCTGGCTTC
CGTGTTTGGGCTGGGAACATGTCCCATGCTGACCCCGATGTGGTTCCTGAGAGACTTGATGATGTTTACCCTGGCTGCGT
TTTTGCTCTCCCGTTTCCGTCCAGCTCTTTACGCCTTTGGCCTGTTTTGCCTGTTTCTGCACCGGTGGGACGACTCCCTG
GCATGGCCCAGTCCGTACATGTTTGGGGATTTTGCGCTCGGCGTTATGCTGGCGTCCGCCGCACCGGGCTGTCTGAACCG
CTGGGGCAACATGCCCCTTGCCGTGCATGGTTCCATTCTTTTAGCCTCCGTGGGTCTTGTCTGGGTAAGCTGTACGGACT
CTTTCCTGATTGCGGACGACTCTTTTCCCGGATTGATTGTTCTGGCCTTCCTCAGCTTCGGAATTATTGTAAAGGCCGTC
AGCCCCGGCTGGTCGGAAAAGCTGGCCCGGTGGGCGTCCGGCAGCTTTTTCGTGTATTGTTCCCATATTTTTGTTCTGAT
AGCCCTGATGGGCGTAGAGAGCTGTTTTCCCTCCCCATGGCCTGCCTGGGCGTGGTGGTGCCTGGTTCCCGCGGTTTACA
TGATGGCGCGGAGCGTTTACGTATTCCTCAAACGCTATTTCCCCCGTTCCCTCGTCCTGATGAGCGGGGGAAAATGA

Upstream 100 bases:

>100_bases
CATAATACGATGCCTGTGAAGGTTGATAAGGCCGCTTTTCGTCTATAAAATCAATAAAAAATAGTGCTTTTTCAAAACAA
TCATCCAGAATGGGGCTGTC

Downstream 100 bases:

>100_bases
CCTTTGGAACAACGGACGGAAAGCTCCGCCGGGAGTGTTCCATGTTTACTTTTATGGCACCGGAGAGACGTCATCCTGTT
TCTCTCTCCTGGGTTTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MTVSSASGKEIHPRLPWVEIARLLATLVVIMQHVPSMGFPPNQWLIGPALATFFLLAGYFSASGLDEQGAGTWAGRRLLV
LLRPYLFWCAAYWLAAGMPLAPGSLASVFGLGTCPMLTPMWFLRDLMMFTLAAFLLSRFRPALYAFGLFCLFLHRWDDSL
AWPSPYMFGDFALGVMLASAAPGCLNRWGNMPLAVHGSILLASVGLVWVSCTDSFLIADDSFPGLIVLAFLSFGIIVKAV
SPGWSEKLARWASGSFFVYCSHIFVLIALMGVESCFPSPWPAWAWWCLVPAVYMMARSVYVFLKRYFPRSLVLMSGGK

Sequences:

>Translated_318_residues
MTVSSASGKEIHPRLPWVEIARLLATLVVIMQHVPSMGFPPNQWLIGPALATFFLLAGYFSASGLDEQGAGTWAGRRLLV
LLRPYLFWCAAYWLAAGMPLAPGSLASVFGLGTCPMLTPMWFLRDLMMFTLAAFLLSRFRPALYAFGLFCLFLHRWDDSL
AWPSPYMFGDFALGVMLASAAPGCLNRWGNMPLAVHGSILLASVGLVWVSCTDSFLIADDSFPGLIVLAFLSFGIIVKAV
SPGWSEKLARWASGSFFVYCSHIFVLIALMGVESCFPSPWPAWAWWCLVPAVYMMARSVYVFLKRYFPRSLVLMSGGK
>Mature_317_residues
TVSSASGKEIHPRLPWVEIARLLATLVVIMQHVPSMGFPPNQWLIGPALATFFLLAGYFSASGLDEQGAGTWAGRRLLVL
LRPYLFWCAAYWLAAGMPLAPGSLASVFGLGTCPMLTPMWFLRDLMMFTLAAFLLSRFRPALYAFGLFCLFLHRWDDSLA
WPSPYMFGDFALGVMLASAAPGCLNRWGNMPLAVHGSILLASVGLVWVSCTDSFLIADDSFPGLIVLAFLSFGIIVKAVS
PGWSEKLARWASGSFFVYCSHIFVLIALMGVESCFPSPWPAWAWWCLVPAVYMMARSVYVFLKRYFPRSLVLMSGGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35111; Mature: 34980

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSSASGKEIHPRLPWVEIARLLATLVVIMQHVPSMGFPPNQWLIGPALATFFLLAGYF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
SASGLDEQGAGTWAGRRLLVLLRPYLFWCAAYWLAAGMPLAPGSLASVFGLGTCPMLTPM
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHH
WFLRDLMMFTLAAFLLSRFRPALYAFGLFCLFLHRWDDSLAWPSPYMFGDFALGVMLASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
APGCLNRWGNMPLAVHGSILLASVGLVWVSCTDSFLIADDSFPGLIVLAFLSFGIIVKAV
CCHHHHHHCCCCEEEHHHHHHHHHHHHHEECCCCEEEECCCCCHHHHHHHHHHHHHHHHC
SPGWSEKLARWASGSFFVYCSHIFVLIALMGVESCFPSPWPAWAWWCLVPAVYMMARSVY
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VFLKRYFPRSLVLMSGGK
HHHHHHCCHHEEEECCCC
>Mature Secondary Structure 
TVSSASGKEIHPRLPWVEIARLLATLVVIMQHVPSMGFPPNQWLIGPALATFFLLAGYF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
SASGLDEQGAGTWAGRRLLVLLRPYLFWCAAYWLAAGMPLAPGSLASVFGLGTCPMLTPM
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHH
WFLRDLMMFTLAAFLLSRFRPALYAFGLFCLFLHRWDDSLAWPSPYMFGDFALGVMLASA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
APGCLNRWGNMPLAVHGSILLASVGLVWVSCTDSFLIADDSFPGLIVLAFLSFGIIVKAV
CCHHHHHHCCCCEEEHHHHHHHHHHHHHEECCCCEEEECCCCCHHHHHHHHHHHHHHHHC
SPGWSEKLARWASGSFFVYCSHIFVLIALMGVESCFPSPWPAWAWWCLVPAVYMMARSVY
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VFLKRYFPRSLVLMSGGK
HHHHHHCCHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA