Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is lnt [H]
Identifier: 187736403
GI number: 187736403
Start: 2331792
End: 2333681
Strand: Reverse
Name: lnt [H]
Synonym: Amuc_1921
Alternate gene names: 187736403
Gene position: 2333681-2331792 (Counterclockwise)
Preceding gene: 187736407
Following gene: 187736400
Centisome position: 87.6
GC content: 59.47
Gene sequence:
>1890_bases ATGAATATCCCACCTGCTTCCCTCCCTCGTCTCCTGCCCGTGTGGGCAGGGCTGCTGCTGGCCGCTTTTTCCGGAATTCT GACGGCCTGCGCCTTTATCCCGGTGGACTGGGGCGGATGCGTATGGATAGGGTTCCTGCCTTTGCTGACAGCCCTGTGGT ACGGCCGCAGGCGGGAGGGGAAAAGGGGAATGCTGGCATACGCCCTGTATGGCTGGATGTTTGGGGTAGTATTTTACGGC ATTTCCTTCTGGTGGGTCAATGAAGTCAGCACGCTGGGCTATATTCCCCTGATGATTTTTTACGGAGGCCTGTTTCCCGG CCTCTGGGCTCTGGTCATGGGAGTGTTCTTCCGACCGGACGCCCGGCCGCTGCCCGATGCGAGGCTGACGGCAAAGGAAC GCCGGGCCGCCTGGAAAACCTGGGCCCTGGGCGACATACTGCCCAGCGCCTCCGCCGCTCTGGCGGGCGCCGCTTTATGG GTATGTCTGGAATGGGGGCGGGGCTGGCTGATACCGGGCTTCGGCTGGAACAATCTGGGCGTGGCCCTTTACGGCAATCC TCTGGCCCAGTGGGCGGAATACCTTGGAGTAACGGCGCTGGCTTTTATTCCGGCCGTTTTTTCCGTCTGGCTCTGGCGCG TTTGCCGCCGGGCCGGAACCATGATTATCCATGAAGGCAGGCGTACTGTTCCCTGGGATTTTTTCATACTGGTGGCGGTT CTTTTAACCATGTTTGTCACTGGCGTGGTCTGGACGGCCCGTTACTCCGCCCAGTCTGCCGAAGCCACGGGCGACGGCAG ATTCACCGTTCCCGTCATGGCCGTGCAGCTGAATCTGAGCCAGAAGGAAAAATGGGACCCGGCCAACCGGAGGAACATTT ACCGGGCTTTGCTGGACATGACGGAACAGGGAATGCTGGATCTTCAAAACCGCGCTCTGGAACAGGCGGTCAAAGACGGC GCGGAAGCCTCCCTGGATATGCCGGCCTGGGTAATCTGGCCGGAAAGTTCCTTCCCCATTTCCACGTTTTACCGTGATGC CACGGGAGAACGCTTCTCCAACCAGGACAATGTCAACTTTCTGAGCGCGGAAGAAGATTACGTCCAGGCTCTCCGGAACG GGATATGCAATTTTATTCTGCTGACGGGCACGGATGATATCTATCTGTCTGATGAAGGGCGTGTGGCGCGGGCTTACAAC TGTCTTACCGTCTTTGAGGGGGATTATTCCACAGCCCGGCTGCACGCCAAGGCCATGCTGGTCCCCTTCGGCGAATACAT CCCTATGCGGAAAACATTCCCATTTCTGGAAAAAGCCTTCGAGGCTTCCGCCGGAACCGCCATGGGACTGAATTATACGC CCGGGTGTTCCTCCAGCCCCGTTCCCGTGCCCATCCGTCCCGGAAGCTCCGTTACGGTGGGGGTCATCCCTCTTGTCTGC TTTGAAGATGTTGTGGGAAGCTGGGTGCGCCGCTTCATCCGGCAGGAGCCCCAGTTGATGGTGAACGTGACCAATGACGG GTGGTTCAACCGTTCCTGCGCCAACGAACAGCATTGGCGCAATGCGGCGTTCCGGTGTATTGAGCTGCGCCGTGCCATGG TCCGTGCCGCCAATACCGGCGTAAGCGTGGCTCTGGCCCCCAACGGCGCGGTTATTGCGGATTTGCGGGATTCCTCCGGT TCACCGTTTACCAGAGGGGTGATGGCTGCCACATTGCCTGTGGGCTGTACGAAAATAACCCTGTACGCCATGCTGGGCGA CTGGGCCGTCCTGGTTTGTTTCCTGGTGTTCGCGGCTCTGTTGCTGCGCAGGATAGGCGCAGGGAAACGCGTCCATGGCC CCGTGGAGAACGGAGTTTACCGGTGTTCCACGGGGGCTACGCCCAGATAA
Upstream 100 bases:
>100_bases CCGCATTTGAGTAAATTTTGCAATCTTTTTTGTTGCAGGAATGAGTCAGCATGGGGGACAATGGCGGCATTCCCGTTCCC GGAATAAAAGGCTTTTCACG
Downstream 100 bases:
>100_bases TTCCTGACTTGTTTGAACGCAGGGTAGGAAATGCCTGTTTCATGGCACCAGAAGGCGGAAGAAGAGCCGCCGTCCAGGTT CAGGGCCGTTTCCACCCGGA
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MNIPPASLPRLLPVWAGLLLAAFSGILTACAFIPVDWGGCVWIGFLPLLTALWYGRRREGKRGMLAYALYGWMFGVVFYG ISFWWVNEVSTLGYIPLMIFYGGLFPGLWALVMGVFFRPDARPLPDARLTAKERRAAWKTWALGDILPSASAALAGAALW VCLEWGRGWLIPGFGWNNLGVALYGNPLAQWAEYLGVTALAFIPAVFSVWLWRVCRRAGTMIIHEGRRTVPWDFFILVAV LLTMFVTGVVWTARYSAQSAEATGDGRFTVPVMAVQLNLSQKEKWDPANRRNIYRALLDMTEQGMLDLQNRALEQAVKDG AEASLDMPAWVIWPESSFPISTFYRDATGERFSNQDNVNFLSAEEDYVQALRNGICNFILLTGTDDIYLSDEGRVARAYN CLTVFEGDYSTARLHAKAMLVPFGEYIPMRKTFPFLEKAFEASAGTAMGLNYTPGCSSSPVPVPIRPGSSVTVGVIPLVC FEDVVGSWVRRFIRQEPQLMVNVTNDGWFNRSCANEQHWRNAAFRCIELRRAMVRAANTGVSVALAPNGAVIADLRDSSG SPFTRGVMAATLPVGCTKITLYAMLGDWAVLVCFLVFAALLLRRIGAGKRVHGPVENGVYRCSTGATPR
Sequences:
>Translated_629_residues MNIPPASLPRLLPVWAGLLLAAFSGILTACAFIPVDWGGCVWIGFLPLLTALWYGRRREGKRGMLAYALYGWMFGVVFYG ISFWWVNEVSTLGYIPLMIFYGGLFPGLWALVMGVFFRPDARPLPDARLTAKERRAAWKTWALGDILPSASAALAGAALW VCLEWGRGWLIPGFGWNNLGVALYGNPLAQWAEYLGVTALAFIPAVFSVWLWRVCRRAGTMIIHEGRRTVPWDFFILVAV LLTMFVTGVVWTARYSAQSAEATGDGRFTVPVMAVQLNLSQKEKWDPANRRNIYRALLDMTEQGMLDLQNRALEQAVKDG AEASLDMPAWVIWPESSFPISTFYRDATGERFSNQDNVNFLSAEEDYVQALRNGICNFILLTGTDDIYLSDEGRVARAYN CLTVFEGDYSTARLHAKAMLVPFGEYIPMRKTFPFLEKAFEASAGTAMGLNYTPGCSSSPVPVPIRPGSSVTVGVIPLVC FEDVVGSWVRRFIRQEPQLMVNVTNDGWFNRSCANEQHWRNAAFRCIELRRAMVRAANTGVSVALAPNGAVIADLRDSSG SPFTRGVMAATLPVGCTKITLYAMLGDWAVLVCFLVFAALLLRRIGAGKRVHGPVENGVYRCSTGATPR >Mature_629_residues MNIPPASLPRLLPVWAGLLLAAFSGILTACAFIPVDWGGCVWIGFLPLLTALWYGRRREGKRGMLAYALYGWMFGVVFYG ISFWWVNEVSTLGYIPLMIFYGGLFPGLWALVMGVFFRPDARPLPDARLTAKERRAAWKTWALGDILPSASAALAGAALW VCLEWGRGWLIPGFGWNNLGVALYGNPLAQWAEYLGVTALAFIPAVFSVWLWRVCRRAGTMIIHEGRRTVPWDFFILVAV LLTMFVTGVVWTARYSAQSAEATGDGRFTVPVMAVQLNLSQKEKWDPANRRNIYRALLDMTEQGMLDLQNRALEQAVKDG AEASLDMPAWVIWPESSFPISTFYRDATGERFSNQDNVNFLSAEEDYVQALRNGICNFILLTGTDDIYLSDEGRVARAYN CLTVFEGDYSTARLHAKAMLVPFGEYIPMRKTFPFLEKAFEASAGTAMGLNYTPGCSSSPVPVPIRPGSSVTVGVIPLVC FEDVVGSWVRRFIRQEPQLMVNVTNDGWFNRSCANEQHWRNAAFRCIELRRAMVRAANTGVSVALAPNGAVIADLRDSSG SPFTRGVMAATLPVGCTKITLYAMLGDWAVLVCFLVFAALLLRRIGAGKRVHGPVENGVYRCSTGATPR
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=592, Percent_Identity=25.8445945945946, Blast_Score=129, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 69581; Mature: 69581
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPPASLPRLLPVWAGLLLAAFSGILTACAFIPVDWGGCVWIGFLPLLTALWYGRRREG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC KRGMLAYALYGWMFGVVFYGISFWWVNEVSTLGYIPLMIFYGGLFPGLWALVMGVFFRPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ARPLPDARLTAKERRAAWKTWALGDILPSASAALAGAALWVCLEWGRGWLIPGFGWNNLG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC VALYGNPLAQWAEYLGVTALAFIPAVFSVWLWRVCRRAGTMIIHEGRRTVPWDFFILVAV EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHH LLTMFVTGVVWTARYSAQSAEATGDGRFTVPVMAVQLNLSQKEKWDPANRRNIYRALLDM HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH TEQGMLDLQNRALEQAVKDGAEASLDMPAWVIWPESSFPISTFYRDATGERFSNQDNVNF HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEE LSAEEDYVQALRNGICNFILLTGTDDIYLSDEGRVARAYNCLTVFEGDYSTARLHAKAML ECCCHHHHHHHHCCCCEEEEEECCCCEEECCCCCEEEEEEEEEEEECCCCHHHHHHHEEE VPFGEYIPMRKTFPFLEKAFEASAGTAMGLNYTPGCSSSPVPVPIRPGSSVTVGVIPLVC EECCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCEEEHHHHHHH FEDVVGSWVRRFIRQEPQLMVNVTNDGWFNRSCANEQHWRNAAFRCIELRRAMVRAANTG HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC VSVALAPNGAVIADLRDSSGSPFTRGVMAATLPVGCTKITLYAMLGDWAVLVCFLVFAAL EEEEECCCCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLRRIGAGKRVHGPVENGVYRCSTGATPR HHHHHCCCCCCCCCHHCCEEEECCCCCCC >Mature Secondary Structure MNIPPASLPRLLPVWAGLLLAAFSGILTACAFIPVDWGGCVWIGFLPLLTALWYGRRREG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC KRGMLAYALYGWMFGVVFYGISFWWVNEVSTLGYIPLMIFYGGLFPGLWALVMGVFFRPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ARPLPDARLTAKERRAAWKTWALGDILPSASAALAGAALWVCLEWGRGWLIPGFGWNNLG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC VALYGNPLAQWAEYLGVTALAFIPAVFSVWLWRVCRRAGTMIIHEGRRTVPWDFFILVAV EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHH LLTMFVTGVVWTARYSAQSAEATGDGRFTVPVMAVQLNLSQKEKWDPANRRNIYRALLDM HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH TEQGMLDLQNRALEQAVKDGAEASLDMPAWVIWPESSFPISTFYRDATGERFSNQDNVNF HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEE LSAEEDYVQALRNGICNFILLTGTDDIYLSDEGRVARAYNCLTVFEGDYSTARLHAKAML ECCCHHHHHHHHCCCCEEEEEECCCCEEECCCCCEEEEEEEEEEEECCCCHHHHHHHEEE VPFGEYIPMRKTFPFLEKAFEASAGTAMGLNYTPGCSSSPVPVPIRPGSSVTVGVIPLVC EECCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCCCEEEECCCCCEEEHHHHHHH FEDVVGSWVRRFIRQEPQLMVNVTNDGWFNRSCANEQHWRNAAFRCIELRRAMVRAANTG HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC VSVALAPNGAVIADLRDSSGSPFTRGVMAATLPVGCTKITLYAMLGDWAVLVCFLVFAAL EEEEECCCCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLRRIGAGKRVHGPVENGVYRCSTGATPR HHHHHCCCCCCCCCHHCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA