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The map label for this gene is nrfI [H]

Identifier: 187736408

GI number: 187736408

Start: 2338013

End: 2339821

Strand: Reverse

Name: nrfI [H]

Synonym: Amuc_1926

Alternate gene names: 187736408

Gene position: 2339821-2338013 (Counterclockwise)

Preceding gene: 187736409

Following gene: 187736407

Centisome position: 87.83

GC content: 55.72

Gene sequence:

>1809_bases
ATGCAGTGTAAAATTACTTTATTTACGGCGTTTTTCGTTGCTCTTGCGATTGCGTTATCGCCTCTGTTTCAGAGGATTGG
TAGTTCTTTTTCCTCATTTGACGGCATAGGGGCGCCCTCACCCGGCGCGCTGCCATGCCTGAAGGCTGGACGAGTGATGC
CGGTTTCAAGCGCAGCGGCGGATTCCCTTAAATTGGCAAGCGGCCGCACGTCGGTGAATCTTGGAGGCTCTCGGACCGGG
CCGGTGAAGTGGTTGCTGGCATTAAACGCCAGCCCGGCAAAAATGGCCGGCGAACCTTTTCTGCGTTCGGATAACAGGGA
TATGGTCGAATTCCTTGGCGGACGAGGCCGTTATTTTTCCTATGCCGATGCAGTTGAGAAGGCTGGCCTGCTGCGCGGCT
CTCTGCGGGGAAATTCTCCTCAGGCCCATGCCGCGGAAGCCGTACTGGGCGCACTCGCCGTTTATGAGCAGGCCGGCGTT
GCGCTCGCTCTCCGCCTGGAGGGGACATCGGGCTGTTTGGGGACGCTTGATGCATGGCATGAAGCTATGGCCGAAGCCTC
AGCAGAGCTTGAAGCCGCTGAACGTGAAAAACGCCATCCCTCGCTTGACCGGCTTTACCGTGCCAATCGCTATTTTCAAT
TCCTCCAGGCTCTTGTGCAGGTAGAAGAAGCGGATCCGAATGTGGCCCTGCGAGTAATCCCTCATGAGGGAAGCTACCTG
ACCCCGGCTGCCGCTCTGCTCGAAAAAAATCTCAGTCCCGCCGGGTGGACCGCCCTGAAAGCCTATGCCGCAGCCTGCGA
TGCCTATGCTGCCGGAGATGAATCTACTGCGGCAGAGACTCTGCGTCAACTTTCTGGGGAATTGGAGTCAATACTGCCCA
TGGATTCTTTCAAACTGCATTTCGAGCATTGCGTCAATGCTATCGAACCCTTCTTGGGAGGCTTCCTTCTCTACGACATG
TCGTTGGTTTGTTTCGTGGTCTCTCTGTTTCTCAAGCGGCGGAAGACATTGCTGCATTTTGCGACGGTCTTCCTGTGTAT
GGCGGTATTATGGCATTTATTCGGCATTGCGGCCCGCATGTACATTCAATCGCGCCCCCCGGTAACCAATTTGTATTCCT
CGGTCGTCTTTGCGGGCGCGGTAGCCTCATTATTCGGCGGGACGCTTTATATCCTCCGCCGTCAGCTTCCTGTTGCCGCG
ATCGCCTGCGCTTCCGGCCTTCTATCACTCTTGGTAGCCATGAATTTGCCCTACAGCGGCGATACCATGGGCATGATGCG
TGCCGTTCTCAATTCGAATTTCTGGCTCACCATGCACGTAATGACCATCATGATAGGCTACGGAAGTGTTTTTTTTGCCG
GGTTTTTAGCCTCATATCATCTGGTGGCCCGTTTCTTCGGACAGGGTGAAAAGGGGCTGAAAGCCGGGGCCTGCGGAGTC
TATCGCATCCTTCTCGTGGCGCTCTTCTTCTGTTTTCTGGGGACAATGCTCGGCGGCATCTGGGCCGACATGAGCTGGGG
ACGGTTCTGGGGGTGGGACCCTAAAGAAAACGGTGCGTTAATGACACTCCTTTGGTGCTCCTGCTCCCTCCATGCCCGAC
TTTTACACGTCTGTTCCTGTCAAGGCTTCCTCGTTCTTGCCTCGCTCGGAAATATCGTGGCAGCCTGGGGGTGGTTCGGT
GTCAACCTCATGGGGATTGGCCTGCACTCTTACGGTTTTGTGGAAGGCGGCTGGTTCTGGTTTTTCCTTTTTGTGGGCCT
TCAGGTCCTTGCGGCGGCTTCAGCCCTGATTCCCCAAAGGAGCCGCTGA

Upstream 100 bases:

>100_bases
GTACACAATCCGGTGCGCTTTTTTCCGTGGATATCGGTGCCCGGCGTATTTGCGGGCATGCTGCTGATTTTTCTCCCAAC
CCTGCGTGCCCGAAAAAAAC

Downstream 100 bases:

>100_bases
TGATTTTACGAATCATCGGGCAGGGAAGGGGAGGCGTTCGCGACATACGGCATTGATGAATGGAAAATACGGAATTGCAA
TGGGAGAACCATCCGGGAGC

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MQCKITLFTAFFVALAIALSPLFQRIGSSFSSFDGIGAPSPGALPCLKAGRVMPVSSAAADSLKLASGRTSVNLGGSRTG
PVKWLLALNASPAKMAGEPFLRSDNRDMVEFLGGRGRYFSYADAVEKAGLLRGSLRGNSPQAHAAEAVLGALAVYEQAGV
ALALRLEGTSGCLGTLDAWHEAMAEASAELEAAEREKRHPSLDRLYRANRYFQFLQALVQVEEADPNVALRVIPHEGSYL
TPAAALLEKNLSPAGWTALKAYAAACDAYAAGDESTAAETLRQLSGELESILPMDSFKLHFEHCVNAIEPFLGGFLLYDM
SLVCFVVSLFLKRRKTLLHFATVFLCMAVLWHLFGIAARMYIQSRPPVTNLYSSVVFAGAVASLFGGTLYILRRQLPVAA
IACASGLLSLLVAMNLPYSGDTMGMMRAVLNSNFWLTMHVMTIMIGYGSVFFAGFLASYHLVARFFGQGEKGLKAGACGV
YRILLVALFFCFLGTMLGGIWADMSWGRFWGWDPKENGALMTLLWCSCSLHARLLHVCSCQGFLVLASLGNIVAAWGWFG
VNLMGIGLHSYGFVEGGWFWFFLFVGLQVLAAASALIPQRSR

Sequences:

>Translated_602_residues
MQCKITLFTAFFVALAIALSPLFQRIGSSFSSFDGIGAPSPGALPCLKAGRVMPVSSAAADSLKLASGRTSVNLGGSRTG
PVKWLLALNASPAKMAGEPFLRSDNRDMVEFLGGRGRYFSYADAVEKAGLLRGSLRGNSPQAHAAEAVLGALAVYEQAGV
ALALRLEGTSGCLGTLDAWHEAMAEASAELEAAEREKRHPSLDRLYRANRYFQFLQALVQVEEADPNVALRVIPHEGSYL
TPAAALLEKNLSPAGWTALKAYAAACDAYAAGDESTAAETLRQLSGELESILPMDSFKLHFEHCVNAIEPFLGGFLLYDM
SLVCFVVSLFLKRRKTLLHFATVFLCMAVLWHLFGIAARMYIQSRPPVTNLYSSVVFAGAVASLFGGTLYILRRQLPVAA
IACASGLLSLLVAMNLPYSGDTMGMMRAVLNSNFWLTMHVMTIMIGYGSVFFAGFLASYHLVARFFGQGEKGLKAGACGV
YRILLVALFFCFLGTMLGGIWADMSWGRFWGWDPKENGALMTLLWCSCSLHARLLHVCSCQGFLVLASLGNIVAAWGWFG
VNLMGIGLHSYGFVEGGWFWFFLFVGLQVLAAASALIPQRSR
>Mature_602_residues
MQCKITLFTAFFVALAIALSPLFQRIGSSFSSFDGIGAPSPGALPCLKAGRVMPVSSAAADSLKLASGRTSVNLGGSRTG
PVKWLLALNASPAKMAGEPFLRSDNRDMVEFLGGRGRYFSYADAVEKAGLLRGSLRGNSPQAHAAEAVLGALAVYEQAGV
ALALRLEGTSGCLGTLDAWHEAMAEASAELEAAEREKRHPSLDRLYRANRYFQFLQALVQVEEADPNVALRVIPHEGSYL
TPAAALLEKNLSPAGWTALKAYAAACDAYAAGDESTAAETLRQLSGELESILPMDSFKLHFEHCVNAIEPFLGGFLLYDM
SLVCFVVSLFLKRRKTLLHFATVFLCMAVLWHLFGIAARMYIQSRPPVTNLYSSVVFAGAVASLFGGTLYILRRQLPVAA
IACASGLLSLLVAMNLPYSGDTMGMMRAVLNSNFWLTMHVMTIMIGYGSVFFAGFLASYHLVARFFGQGEKGLKAGACGV
YRILLVALFFCFLGTMLGGIWADMSWGRFWGWDPKENGALMTLLWCSCSLHARLLHVCSCQGFLVLASLGNIVAAWGWFG
VNLMGIGLHSYGFVEGGWFWFFLFVGLQVLAAASALIPQRSR

Specific function: May play a role in cytochrome c biogenesis and may be required for maturation of the NrfA protein [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR007816 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm; PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 65050; Mature: 65050

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCKITLFTAFFVALAIALSPLFQRIGSSFSSFDGIGAPSPGALPCLKAGRVMPVSSAAA
CCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHH
DSLKLASGRTSVNLGGSRTGPVKWLLALNASPAKMAGEPFLRSDNRDMVEFLGGRGRYFS
HHHEECCCCCEEECCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCH
YADAVEKAGLLRGSLRGNSPQAHAAEAVLGALAVYEQAGVALALRLEGTSGCLGTLDAWH
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHH
EAMAEASAELEAAEREKRHPSLDRLYRANRYFQFLQALVQVEEADPNVALRVIPHEGSYL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
TPAAALLEKNLSPAGWTALKAYAAACDAYAAGDESTAAETLRQLSGELESILPMDSFKLH
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
FEHCVNAIEPFLGGFLLYDMSLVCFVVSLFLKRRKTLLHFATVFLCMAVLWHLFGIAARM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIQSRPPVTNLYSSVVFAGAVASLFGGTLYILRRQLPVAAIACASGLLSLLVAMNLPYSG
HHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
DTMGMMRAVLNSNFWLTMHVMTIMIGYGSVFFAGFLASYHLVARFFGQGEKGLKAGACGV
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
YRILLVALFFCFLGTMLGGIWADMSWGRFWGWDPKENGALMTLLWCSCSLHARLLHVCSC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCC
QGFLVLASLGNIVAAWGWFGVNLMGIGLHSYGFVEGGWFWFFLFVGLQVLAAASALIPQR
CHHHHHHHHHHHHHHHHHHHHEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
SR
CC
>Mature Secondary Structure
MQCKITLFTAFFVALAIALSPLFQRIGSSFSSFDGIGAPSPGALPCLKAGRVMPVSSAAA
CCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHHHHCCCCCCCCHHHH
DSLKLASGRTSVNLGGSRTGPVKWLLALNASPAKMAGEPFLRSDNRDMVEFLGGRGRYFS
HHHEECCCCCEEECCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCH
YADAVEKAGLLRGSLRGNSPQAHAAEAVLGALAVYEQAGVALALRLEGTSGCLGTLDAWH
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHH
EAMAEASAELEAAEREKRHPSLDRLYRANRYFQFLQALVQVEEADPNVALRVIPHEGSYL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
TPAAALLEKNLSPAGWTALKAYAAACDAYAAGDESTAAETLRQLSGELESILPMDSFKLH
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
FEHCVNAIEPFLGGFLLYDMSLVCFVVSLFLKRRKTLLHFATVFLCMAVLWHLFGIAARM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIQSRPPVTNLYSSVVFAGAVASLFGGTLYILRRQLPVAAIACASGLLSLLVAMNLPYSG
HHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
DTMGMMRAVLNSNFWLTMHVMTIMIGYGSVFFAGFLASYHLVARFFGQGEKGLKAGACGV
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
YRILLVALFFCFLGTMLGGIWADMSWGRFWGWDPKENGALMTLLWCSCSLHARLLHVCSC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCC
QGFLVLASLGNIVAAWGWFGVNLMGIGLHSYGFVEGGWFWFFLFVGLQVLAAASALIPQR
CHHHHHHHHHHHHHHHHHHHHEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
SR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]