Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is crcB [H]
Identifier: 187736398
GI number: 187736398
Start: 2326877
End: 2327245
Strand: Reverse
Name: crcB [H]
Synonym: Amuc_1916
Alternate gene names: 187736398
Gene position: 2327245-2326877 (Counterclockwise)
Preceding gene: 187736400
Following gene: 187736397
Centisome position: 87.36
GC content: 56.91
Gene sequence:
>369_bases ATGATGAAAATGCTGATGATAGTGGGCCTGGGAAGCTTTGCGGGCGGTGTATTGCGTTTCCTGCTGGCCCGGTTCGTCCA GGTCACTTCGGCAAGTTCGTTCCCCTGGGGCACGGCGGCAGTCAACCTGCTGGGATGTTTTATCCTGGGCTGCCTCTACG GTTTGTTCGACCGGAGCCTGGTGCATACGGAAACGCGGCTCTTTCTTACCGCAGGCCTGTGCGGCGGTTTCACCACCTTT TCCACGCTGATGAATGAATCCTTCCTGTTGTTGAAGGAAGGGAACTTCTCCGCCTTCTTCCTTTACACTCTCATCAGCTT TGCCGGGGGGCTCCTTGCCATTGGCCTGGGCTATCTGTCCGCCCGGTAA
Upstream 100 bases:
>100_bases ACCCTTTCATGGACAAGAAGCCGCAGTCCGTCTTTCCCGGCGGATTTCGGCAGCTGCTCCGAAACTTTATTCCCCATTAA AACATAGAAAAAGCCGCTAT
Downstream 100 bases:
>100_bases AGAAAAAACATGGAAACCCGGCAGCCGCGCTGTTTTTCAGGGGTGGTTTAAACGCTGTCAATTCGGTGGTAACGAGGCTC GATGCTTCCTTGACGCAGAA
Product: Camphor resistance CrcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MMKMLMIVGLGSFAGGVLRFLLARFVQVTSASSFPWGTAAVNLLGCFILGCLYGLFDRSLVHTETRLFLTAGLCGGFTTF STLMNESFLLLKEGNFSAFFLYTLISFAGGLLAIGLGYLSAR
Sequences:
>Translated_122_residues MMKMLMIVGLGSFAGGVLRFLLARFVQVTSASSFPWGTAAVNLLGCFILGCLYGLFDRSLVHTETRLFLTAGLCGGFTTF STLMNESFLLLKEGNFSAFFLYTLISFAGGLLAIGLGYLSAR >Mature_122_residues MMKMLMIVGLGSFAGGVLRFLLARFVQVTSASSFPWGTAAVNLLGCFILGCLYGLFDRSLVHTETRLFLTAGLCGGFTTF STLMNESFLLLKEGNFSAFFLYTLISFAGGLLAIGLGYLSAR
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
Organism=Escherichia coli, GI1786842, Length=120, Percent_Identity=35, Blast_Score=60, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13132; Mature: 13132
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKMLMIVGLGSFAGGVLRFLLARFVQVTSASSFPWGTAAVNLLGCFILGCLYGLFDRSL CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VHTETRLFLTAGLCGGFTTFSTLMNESFLLLKEGNFSAFFLYTLISFAGGLLAIGLGYLS HHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC AR CC >Mature Secondary Structure MMKMLMIVGLGSFAGGVLRFLLARFVQVTSASSFPWGTAAVNLLGCFILGCLYGLFDRSL CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VHTETRLFLTAGLCGGFTTFSTLMNESFLLLKEGNFSAFFLYTLISFAGGLLAIGLGYLS HHHHHHHHHHHHHHCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHC AR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12663928 [H]