Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736392
Identifier: 187736392
GI number: 187736392
Start: 2315368
End: 2316444
Strand: Direct
Name: 187736392
Synonym: Amuc_1909
Alternate gene names: NA
Gene position: 2315368-2316444 (Clockwise)
Preceding gene: 187736391
Following gene: 187736393
Centisome position: 86.91
GC content: 43.08
Gene sequence:
>1077_bases ATGTTTTTTAATCCTGATTTTATGATTGACCGAATTTTCAGTTTTCTGTCTTGCTCATCCTCCGTAGCGCTGCTTGCGAC CTTTTCCTCTGTTATTGCATTGCCTTCGTCCGCCGCTTTTCCAACAGATTCGCAAGAATTGAAATTCAACAAGGATTCTG ACATTGGAGAATTAAAAAAACTTCTTCAGCAAGGAGAACTCGTAAAATTTTACCAAACAGCCCACACCCATATGGGGCAG CTTGAGTGGAGTGACATCAGAGGGGGAGTTTCCCCGGACAAGCTGGATCGGTTATTGTTGATTGCCCGGATTACTTCCGC TGCTCCTCTGTTTGGAGAGAACGAAAATACACCGTCTGAACAAATGACGCCGGATTTTGACTTAAAAAATGATATTTCTC TCAAAGGGAAAGTTATGGTAGATCTGGTTATCATTTCCAAAATCAATCTCAAGCAAAAATGCTCTGCCGTGAGAAAGAAA GAAGTGGGGCAGCTTTGTTCCATTTACGCGGCAACGATGCTGAAGATGATGAAAGAAGCCTACATTCCTGATTTCGAGGG CTGGAAGAAAGAAGTTATGGAGAGAAAAACGGCGGTTTGGAGCAAAGAGTTTAACGCCAGGTGGGAGTCCTTCCTGAAAG AAAGAGACGAGAGAGTGGAGAGAAAAAAGAAGGAACTCTCCATACCATTCGAACAGAGAATGCGACGGCAAAAAACGGAA GAGGAACGGATAAGAGACAGGGAATTTGGAGAGAAAGACGCCGCCTTCATGCAGGAAGCCAGGGAAAAATGGGACAAATG TAGGAATCTTGCCAATATATTAAGTATCATGGAAGATCGAAACTCCAAAATCAAATCATTCCTCAAAGATGGAGGAGGAG GTTTATTACGAATTTTGTTGGACAACTACCCCGGCAAAGCCACCGAAGTGTTTAAATACCTGAAGCTGGCGGGATATGAG GAAGGAGAAATGATGGAGTTGGTTGATCGGGAGGAGGGAAAAACCGAAGAAACGGAATTTTTGTATCAAAGCCCGTTGGG AAGAAAGTTCCTTAAAGAGAAGAAACAAAAGAAATAA
Upstream 100 bases:
>100_bases TGTCCAGATGTTTTTCTTTCTTCTTCCTTTTCTTAAGTTCTCAGCTGAATAGGATATTCTCCATTTGAAATGATTCAGGA ACGAACTTTCGGCGAAATCC
Downstream 100 bases:
>100_bases TTACTGCCAGAGCGCGGAATCATGATATTTTTAGTTTGCAAGGATATTTTATCTTTTTGAGATTCCTTCTCTCTTGCCAG ATCACCTTTCATCCTTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MFFNPDFMIDRIFSFLSCSSSVALLATFSSVIALPSSAAFPTDSQELKFNKDSDIGELKKLLQQGELVKFYQTAHTHMGQ LEWSDIRGGVSPDKLDRLLLIARITSAAPLFGENENTPSEQMTPDFDLKNDISLKGKVMVDLVIISKINLKQKCSAVRKK EVGQLCSIYAATMLKMMKEAYIPDFEGWKKEVMERKTAVWSKEFNARWESFLKERDERVERKKKELSIPFEQRMRRQKTE EERIRDREFGEKDAAFMQEAREKWDKCRNLANILSIMEDRNSKIKSFLKDGGGGLLRILLDNYPGKATEVFKYLKLAGYE EGEMMELVDREEGKTEETEFLYQSPLGRKFLKEKKQKK
Sequences:
>Translated_358_residues MFFNPDFMIDRIFSFLSCSSSVALLATFSSVIALPSSAAFPTDSQELKFNKDSDIGELKKLLQQGELVKFYQTAHTHMGQ LEWSDIRGGVSPDKLDRLLLIARITSAAPLFGENENTPSEQMTPDFDLKNDISLKGKVMVDLVIISKINLKQKCSAVRKK EVGQLCSIYAATMLKMMKEAYIPDFEGWKKEVMERKTAVWSKEFNARWESFLKERDERVERKKKELSIPFEQRMRRQKTE EERIRDREFGEKDAAFMQEAREKWDKCRNLANILSIMEDRNSKIKSFLKDGGGGLLRILLDNYPGKATEVFKYLKLAGYE EGEMMELVDREEGKTEETEFLYQSPLGRKFLKEKKQKK >Mature_358_residues MFFNPDFMIDRIFSFLSCSSSVALLATFSSVIALPSSAAFPTDSQELKFNKDSDIGELKKLLQQGELVKFYQTAHTHMGQ LEWSDIRGGVSPDKLDRLLLIARITSAAPLFGENENTPSEQMTPDFDLKNDISLKGKVMVDLVIISKINLKQKCSAVRKK EVGQLCSIYAATMLKMMKEAYIPDFEGWKKEVMERKTAVWSKEFNARWESFLKERDERVERKKKELSIPFEQRMRRQKTE EERIRDREFGEKDAAFMQEAREKWDKCRNLANILSIMEDRNSKIKSFLKDGGGGLLRILLDNYPGKATEVFKYLKLAGYE EGEMMELVDREEGKTEETEFLYQSPLGRKFLKEKKQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41476; Mature: 41476
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFNPDFMIDRIFSFLSCSSSVALLATFSSVIALPSSAAFPTDSQELKFNKDSDIGELKK CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH LLQQGELVKFYQTAHTHMGQLEWSDIRGGVSPDKLDRLLLIARITSAAPLFGENENTPSE HHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCH QMTPDFDLKNDISLKGKVMVDLVIISKINLKQKCSAVRKKEVGQLCSIYAATMLKMMKEA HCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIPDFEGWKKEVMERKTAVWSKEFNARWESFLKERDERVERKKKELSIPFEQRMRRQKTE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH EERIRDREFGEKDAAFMQEAREKWDKCRNLANILSIMEDRNSKIKSFLKDGGGGLLRILL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH DNYPGKATEVFKYLKLAGYEEGEMMELVDREEGKTEETEFLYQSPLGRKFLKEKKQKK HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure MFFNPDFMIDRIFSFLSCSSSVALLATFSSVIALPSSAAFPTDSQELKFNKDSDIGELKK CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH LLQQGELVKFYQTAHTHMGQLEWSDIRGGVSPDKLDRLLLIARITSAAPLFGENENTPSE HHHHCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCH QMTPDFDLKNDISLKGKVMVDLVIISKINLKQKCSAVRKKEVGQLCSIYAATMLKMMKEA HCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIPDFEGWKKEVMERKTAVWSKEFNARWESFLKERDERVERKKKELSIPFEQRMRRQKTE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCH EERIRDREFGEKDAAFMQEAREKWDKCRNLANILSIMEDRNSKIKSFLKDGGGGLLRILL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH DNYPGKATEVFKYLKLAGYEEGEMMELVDREEGKTEETEFLYQSPLGRKFLKEKKQKK HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA