Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736393

Identifier: 187736393

GI number: 187736393

Start: 2316556

End: 2317836

Strand: Direct

Name: 187736393

Synonym: Amuc_1910

Alternate gene names: NA

Gene position: 2316556-2317836 (Clockwise)

Preceding gene: 187736392

Following gene: 187736394

Centisome position: 86.95

GC content: 53.16

Gene sequence:

>1281_bases
ATGAATACTTTCGTTTCTCTTTGCCTGGTCGGGAGCCTCAGCCTGGGTTCCCTTTGTTATGCGCAGTACATGGATAACGA
TGCCAAGAAGAAGGTAATCAAGGATTTGGATAATTTGCTCGCTCTGAACAGGTCTGCAGAAACCAAGGTAATCAATGCCG
CTATCAGCAAACTGAATTCCGCCGGCAGGGATCCCGGCGCCGCATATGACCTGCTGATTCAGTCCAAGAAGTTTCTGATG
GAAACGGAAAAGGAGAAGGACAAGAGCCAGGGGAAGAGCACCAAAATCGCCTCCAATTCCATGAAGGACTGGATGGACCG
TGAAGCGAAGAAGTACCAGGATAAAAATGCCCGCAAAGGATTAATGCTTCAATATCAATGGGGAGTTCTCGTCCTCAAGG
CTCGTCTTAAGGAAAATTTAATGAACGCCACCTCCCATTCCACCGGAGGAACAGCGGAGGAAACCCTGGACGTTACGGAG
TTCCAGAAGCCGGCCATGGATTTGCTGAATGCCTACCTGTCCGCCTGCTCCGACCCTGATTTTGTCGAACCTTCCTCTTC
CAAAAACAACAATGGAGCAGCCGGAAGAGCCGGCGCCCGTATTGCGGAACAATCCGTCCTTAATACGGAAGTGGGGGAGG
CCCTGGGCATCAGCAGCATGTCTTCCAAGGCTTTCCCGGATTCCATGAAAAACCGGGATGAAATTTTTGACAAGCTGTTT
TTCACCGGATACCGGAAGACCCGCAATCTTCCCGCCCTCAGGCAGGCGTGGAACAAGAGAATTTCCATGGAAGTGGCTCT
GGGAAAAATCAGCCATGCCATTTCCTCCGGCAAGAAATCCGGCATGCAAGGCCGCATCGCCAATGCGTCCGAAGACGAAT
TTGATGAGCAGGGAGCCGCCGTTCTGGATCGTTTGCGCTGGCGCTGCGAACTGGATTGCTTCGACTTGGGAGACCAGGCA
AACGCCACGAGGAATATGATGACGCTGATCCGGACGACGGTGGATCCCGTGCGCCGGGAACAAGGTATCCGCACCCTCCG
GGATAAACTGGTTCAGAGCATGAAGAGCTTGATGGATTCTCCGGAAGAAGAAAGCATGGCTGACGGTTCCTCTTCATCCT
CTGCACCGCGTCCTGCCATGCGTTCCTCCAAAAAGAAGGCTCCCTCCACCACGATTACGACCAGCCGTGAAATGGATGAT
CCCGGAGCCATCGGAACTGATGTGCCGAAGCCTCCCAAGCCGGCCCCAGCCCGGAGTGACGATTTTTTTGAAGACATCTG
A

Upstream 100 bases:

>100_bases
GCGCGGAATCATGATATTTTTAGTTTGCAAGGATATTTTATCTTTTTGAGATTCCTTCTCTCTTGCCAGATCACCTTTCA
TCCTTCATAATAAAAAAAGC

Downstream 100 bases:

>100_bases
CTTTCTTCAGACAAAAGATGTTGCCCGAACGGCGGTTTCCCTGTTCATGGAATGCGCAGAGCATCCTTGACGTCCGGAGC
CGCCGTTTTATACATTAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MNTFVSLCLVGSLSLGSLCYAQYMDNDAKKKVIKDLDNLLALNRSAETKVINAAISKLNSAGRDPGAAYDLLIQSKKFLM
ETEKEKDKSQGKSTKIASNSMKDWMDREAKKYQDKNARKGLMLQYQWGVLVLKARLKENLMNATSHSTGGTAEETLDVTE
FQKPAMDLLNAYLSACSDPDFVEPSSSKNNNGAAGRAGARIAEQSVLNTEVGEALGISSMSSKAFPDSMKNRDEIFDKLF
FTGYRKTRNLPALRQAWNKRISMEVALGKISHAISSGKKSGMQGRIANASEDEFDEQGAAVLDRLRWRCELDCFDLGDQA
NATRNMMTLIRTTVDPVRREQGIRTLRDKLVQSMKSLMDSPEEESMADGSSSSSAPRPAMRSSKKKAPSTTITTSREMDD
PGAIGTDVPKPPKPAPARSDDFFEDI

Sequences:

>Translated_426_residues
MNTFVSLCLVGSLSLGSLCYAQYMDNDAKKKVIKDLDNLLALNRSAETKVINAAISKLNSAGRDPGAAYDLLIQSKKFLM
ETEKEKDKSQGKSTKIASNSMKDWMDREAKKYQDKNARKGLMLQYQWGVLVLKARLKENLMNATSHSTGGTAEETLDVTE
FQKPAMDLLNAYLSACSDPDFVEPSSSKNNNGAAGRAGARIAEQSVLNTEVGEALGISSMSSKAFPDSMKNRDEIFDKLF
FTGYRKTRNLPALRQAWNKRISMEVALGKISHAISSGKKSGMQGRIANASEDEFDEQGAAVLDRLRWRCELDCFDLGDQA
NATRNMMTLIRTTVDPVRREQGIRTLRDKLVQSMKSLMDSPEEESMADGSSSSSAPRPAMRSSKKKAPSTTITTSREMDD
PGAIGTDVPKPPKPAPARSDDFFEDI
>Mature_426_residues
MNTFVSLCLVGSLSLGSLCYAQYMDNDAKKKVIKDLDNLLALNRSAETKVINAAISKLNSAGRDPGAAYDLLIQSKKFLM
ETEKEKDKSQGKSTKIASNSMKDWMDREAKKYQDKNARKGLMLQYQWGVLVLKARLKENLMNATSHSTGGTAEETLDVTE
FQKPAMDLLNAYLSACSDPDFVEPSSSKNNNGAAGRAGARIAEQSVLNTEVGEALGISSMSSKAFPDSMKNRDEIFDKLF
FTGYRKTRNLPALRQAWNKRISMEVALGKISHAISSGKKSGMQGRIANASEDEFDEQGAAVLDRLRWRCELDCFDLGDQA
NATRNMMTLIRTTVDPVRREQGIRTLRDKLVQSMKSLMDSPEEESMADGSSSSSAPRPAMRSSKKKAPSTTITTSREMDD
PGAIGTDVPKPPKPAPARSDDFFEDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46876; Mature: 46876

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFVSLCLVGSLSLGSLCYAQYMDNDAKKKVIKDLDNLLALNRSAETKVINAAISKLNS
CCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AGRDPGAAYDLLIQSKKFLMETEKEKDKSQGKSTKIASNSMKDWMDREAKKYQDKNARKG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
LMLQYQWGVLVLKARLKENLMNATSHSTGGTAEETLDVTEFQKPAMDLLNAYLSACSDPD
CEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FVEPSSSKNNNGAAGRAGARIAEQSVLNTEVGEALGISSMSSKAFPDSMKNRDEIFDKLF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHCCHHHHHHHHH
FTGYRKTRNLPALRQAWNKRISMEVALGKISHAISSGKKSGMQGRIANASEDEFDEQGAA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
VLDRLRWRCELDCFDLGDQANATRNMMTLIRTTVDPVRREQGIRTLRDKLVQSMKSLMDS
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PEEESMADGSSSSSAPRPAMRSSKKKAPSTTITTSREMDDPGAIGTDVPKPPKPAPARSD
CCHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
DFFEDI
HHHHCC
>Mature Secondary Structure
MNTFVSLCLVGSLSLGSLCYAQYMDNDAKKKVIKDLDNLLALNRSAETKVINAAISKLNS
CCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AGRDPGAAYDLLIQSKKFLMETEKEKDKSQGKSTKIASNSMKDWMDREAKKYQDKNARKG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
LMLQYQWGVLVLKARLKENLMNATSHSTGGTAEETLDVTEFQKPAMDLLNAYLSACSDPD
CEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
FVEPSSSKNNNGAAGRAGARIAEQSVLNTEVGEALGISSMSSKAFPDSMKNRDEIFDKLF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHCCHHHHHHHHH
FTGYRKTRNLPALRQAWNKRISMEVALGKISHAISSGKKSGMQGRIANASEDEFDEQGAA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
VLDRLRWRCELDCFDLGDQANATRNMMTLIRTTVDPVRREQGIRTLRDKLVQSMKSLMDS
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PEEESMADGSSSSSAPRPAMRSSKKKAPSTTITTSREMDDPGAIGTDVPKPPKPAPARSD
CCHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
DFFEDI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA