Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736391

Identifier: 187736391

GI number: 187736391

Start: 2314157

End: 2315206

Strand: Direct

Name: 187736391

Synonym: Amuc_1908

Alternate gene names: NA

Gene position: 2314157-2315206 (Clockwise)

Preceding gene: 187736390

Following gene: 187736392

Centisome position: 86.86

GC content: 43.9

Gene sequence:

>1050_bases
ATGAAGTCTATAATAAAATGTTTTCTGTCTTGCTCATCCTCCGTAGCGCTGCTTGCGACCTTTTCCTCTGTTATTGCATT
GCCTTCGTCCGCCGCTTTTCCAACAGATTCGCAAGAATTGAAATTCAACAAGGATTCTGACATTGGAGAATTAAAAAAAC
TTCTTCAGCAAGGAGAACTCGTAAAATTTTACCAAACAGCCCACACCCATATGGGGCAGCTTGAGTGGAGTGACATCAGA
GGGGGAGTTTCCCCGGACAAGCTGGATCGGTTATTGTTGATTGCCCGGATTACTTCCGCTGCTCCTCTGTTTGGAGAGAA
CGAAAATACACCGTTTGAACAAATGACGCAGGATTTCGCTTCGGCAGGAGATATTCGTCTTAAGGGAAAAGTTATGAAAA
ACCTACTCATCATTTCCAAAATCAATCTCAAGCAAAAATGCTCTGCCGTGAGAAAGAAAGAAGTGGGGCAGCTTTGCTCC
ATTTACGCGGCAACGATGCTGAAGATGATGAAAGAAGCCTACATTCCTGATTTTGAAGGCTGGAAGAAAGAAGTTATGGA
GAGAAAAACGGCGGTTTGGAGCAAAGAGTTTAACGCCAGGTGGGAGTCCTTCCTGAAAGAAAGAGACGAGAGAGTGGAGA
GAAAAAAGAAGGAACTCTCCATACCATTCGAACAGAGAATGCGACGGCAAAAAACGGAAGAGGAACGGATAAGAGACAGG
GAATTTGGAGAGAAAGACGCTGCCTTCATGCAGGAAGCCAGGGAAAAATGGAATAAACGAATGAATCTTGACGTCAGCCT
TTCTATGATGGATGGCCGAAACTCCAAAATCAAATCATTCCTCAAAGATAAGGGAGGATCCTTATTGCGCATTCTGTTGG
ACAACTACCCCGGCAAAGCCACCGAAGTGTTTAAATACCTGAAGCTGGCAGGGTATGAGGAAGGAGAAATGATGGAGTTT
ATTGACCGGGAAATGGGAAAAAACAAGGATACGGAGTTCCTGTATCAAAGTTCCTTGGGAAGAAAGTTCCTTAAAGAGAA
AAAAGAGTAA

Upstream 100 bases:

>100_bases
TCCGTAAATTTCTGGTGGATACCAAGAAGAAGGATGAATGTTCCGTTGAACGGACGTCTGGTGGCGATCATATTTTTAAA
CCCTGATATATAATTTGACA

Downstream 100 bases:

>100_bases
TTCTTTATAAAAAGTGCAATATGGATTCAACAGAGTTGTCAGGAATGATTTTTATTGTTCCTGTCCAGATGTTTTTCTTT
CTTCTTCCTTTTCTTAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKSIIKCFLSCSSSVALLATFSSVIALPSSAAFPTDSQELKFNKDSDIGELKKLLQQGELVKFYQTAHTHMGQLEWSDIR
GGVSPDKLDRLLLIARITSAAPLFGENENTPFEQMTQDFASAGDIRLKGKVMKNLLIISKINLKQKCSAVRKKEVGQLCS
IYAATMLKMMKEAYIPDFEGWKKEVMERKTAVWSKEFNARWESFLKERDERVERKKKELSIPFEQRMRRQKTEEERIRDR
EFGEKDAAFMQEAREKWNKRMNLDVSLSMMDGRNSKIKSFLKDKGGSLLRILLDNYPGKATEVFKYLKLAGYEEGEMMEF
IDREMGKNKDTEFLYQSSLGRKFLKEKKE

Sequences:

>Translated_349_residues
MKSIIKCFLSCSSSVALLATFSSVIALPSSAAFPTDSQELKFNKDSDIGELKKLLQQGELVKFYQTAHTHMGQLEWSDIR
GGVSPDKLDRLLLIARITSAAPLFGENENTPFEQMTQDFASAGDIRLKGKVMKNLLIISKINLKQKCSAVRKKEVGQLCS
IYAATMLKMMKEAYIPDFEGWKKEVMERKTAVWSKEFNARWESFLKERDERVERKKKELSIPFEQRMRRQKTEEERIRDR
EFGEKDAAFMQEAREKWNKRMNLDVSLSMMDGRNSKIKSFLKDKGGSLLRILLDNYPGKATEVFKYLKLAGYEEGEMMEF
IDREMGKNKDTEFLYQSSLGRKFLKEKKE
>Mature_349_residues
MKSIIKCFLSCSSSVALLATFSSVIALPSSAAFPTDSQELKFNKDSDIGELKKLLQQGELVKFYQTAHTHMGQLEWSDIR
GGVSPDKLDRLLLIARITSAAPLFGENENTPFEQMTQDFASAGDIRLKGKVMKNLLIISKINLKQKCSAVRKKEVGQLCS
IYAATMLKMMKEAYIPDFEGWKKEVMERKTAVWSKEFNARWESFLKERDERVERKKKELSIPFEQRMRRQKTEEERIRDR
EFGEKDAAFMQEAREKWNKRMNLDVSLSMMDGRNSKIKSFLKDKGGSLLRILLDNYPGKATEVFKYLKLAGYEEGEMMEF
IDREMGKNKDTEFLYQSSLGRKFLKEKKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40396; Mature: 40396

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIIKCFLSCSSSVALLATFSSVIALPSSAAFPTDSQELKFNKDSDIGELKKLLQQGEL
CHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCH
VKFYQTAHTHMGQLEWSDIRGGVSPDKLDRLLLIARITSAAPLFGENENTPFEQMTQDFA
HHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
SAGDIRLKGKVMKNLLIISKINLKQKCSAVRKKEVGQLCSIYAATMLKMMKEAYIPDFEG
CCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
WKKEVMERKTAVWSKEFNARWESFLKERDERVERKKKELSIPFEQRMRRQKTEEERIRDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH
EFGEKDAAFMQEAREKWNKRMNLDVSLSMMDGRNSKIKSFLKDKGGSLLRILLDNYPGKA
HCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCEEHHHHHCCCCHH
TEVFKYLKLAGYEEGEMMEFIDREMGKNKDTEFLYQSSLGRKFLKEKKE
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSIIKCFLSCSSSVALLATFSSVIALPSSAAFPTDSQELKFNKDSDIGELKKLLQQGEL
CHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCH
VKFYQTAHTHMGQLEWSDIRGGVSPDKLDRLLLIARITSAAPLFGENENTPFEQMTQDFA
HHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
SAGDIRLKGKVMKNLLIISKINLKQKCSAVRKKEVGQLCSIYAATMLKMMKEAYIPDFEG
CCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
WKKEVMERKTAVWSKEFNARWESFLKERDERVERKKKELSIPFEQRMRRQKTEEERIRDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH
EFGEKDAAFMQEAREKWNKRMNLDVSLSMMDGRNSKIKSFLKDKGGSLLRILLDNYPGKA
HCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCEEHHHHHCCCCHH
TEVFKYLKLAGYEEGEMMEFIDREMGKNKDTEFLYQSSLGRKFLKEKKE
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA