Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736390

Identifier: 187736390

GI number: 187736390

Start: 2313075

End: 2314142

Strand: Direct

Name: 187736390

Synonym: Amuc_1907

Alternate gene names: NA

Gene position: 2313075-2314142 (Clockwise)

Preceding gene: 187736389

Following gene: 187736391

Centisome position: 86.82

GC content: 44.85

Gene sequence:

>1068_bases
ATGCAAGCATTTCATGGCCCTTGCCTTGTCCGTACCGTTGCCATTTTCATCCTTTTTTCATCTTTTTCCCTTCTTCATGC
CGAAGATGAGGAATTTTCCGATATCATGGAACTGGTATCGGAAACGGAGAACTGTTCCGCCAAACTGGCCCGTGACAAAA
ACGCGACGGAAGAACAGAAGAAGGAAGACAGAAAGCGCAGGAAAATCGGCATTGGAGAAACGGTCACCGTTACCCTGAAC
TGTAAAAAGCCGTTTCTGTTGGAGCCGAAGGATCAAATTCAATGGAAAGTGATTGAGGGAAAAGAGTTACTTGAAGATGG
CTTAAAAACAGAAGAAACAACAGAAAAAGCTAAATTTCGGATAAATCCTTGTGCCAGTAAAGAACAAATCCAGCAGTCTG
GAGGGAAAGTAGCCATTGAAGTGGAAACCGAACTGGGAACGGCCCTCCCCCGCCCTATCGAATTTGACGTTGTTTTTCCT
GAACATCTTACTGCGGAACATGAAACTTTGGGAGGAATGGTTAAAGGCGTTCCTGCGGCAGATATGGGATTCCCCCGGGA
TGGAGATCCTGCACATGGAGTTTCCGCACAGCTTCTCGTTTCCATCCATCCTCTGGATGTCTGTTTTAAAGGAATTCGTG
TCATTGAAAAAGACAAGGGGTATGTTGGAGCTGCCGGAAGTCTGGCGCAGCCCCATGCAGCGGACAGCGTTTGGAGCGTA
GGTCTTGACAACCGTTTTGGATTGCATGACAACATAGGTATAAAATCCGGGGTGAATGGCCATATGCAATGGGATGAAAT
TCAGGGTTATGATGCCGATGGTCATCCTGTCTATAAACATTCGTATCCTAATGAATTTACATGGAATTGCCTTTTCAGGA
CATATGGGGGAGATGAAAACAAAGAAGGAATATCCGATATTGCCACGGTTTTTCAGAATTTTTATATAGAGAGTAAAGGA
GAAGGATTGTTTTACGCCAGAATCCGTAAATTTCTGGTGGATACCAAGAAGAAGGATGAATGTTCCGTTGAACGGACGTC
TGGTGGCGATCATATTTTTAAACCCTGA

Upstream 100 bases:

>100_bases
CGGAATTATATTTGGCATTACATATATTATGCGAAGTATAGTTTAGGCAGCATTCTCCCATTCTCATTGGACGGAAAACG
CGCTCTGTCACTTGACAAAT

Downstream 100 bases:

>100_bases
TATATAATTTGACAATGAAGTCTATAATAAAATGTTTTCTGTCTTGCTCATCCTCCGTAGCGCTGCTTGCGACCTTTTCC
TCTGTTATTGCATTGCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MQAFHGPCLVRTVAIFILFSSFSLLHAEDEEFSDIMELVSETENCSAKLARDKNATEEQKKEDRKRRKIGIGETVTVTLN
CKKPFLLEPKDQIQWKVIEGKELLEDGLKTEETTEKAKFRINPCASKEQIQQSGGKVAIEVETELGTALPRPIEFDVVFP
EHLTAEHETLGGMVKGVPAADMGFPRDGDPAHGVSAQLLVSIHPLDVCFKGIRVIEKDKGYVGAAGSLAQPHAADSVWSV
GLDNRFGLHDNIGIKSGVNGHMQWDEIQGYDADGHPVYKHSYPNEFTWNCLFRTYGGDENKEGISDIATVFQNFYIESKG
EGLFYARIRKFLVDTKKKDECSVERTSGGDHIFKP

Sequences:

>Translated_355_residues
MQAFHGPCLVRTVAIFILFSSFSLLHAEDEEFSDIMELVSETENCSAKLARDKNATEEQKKEDRKRRKIGIGETVTVTLN
CKKPFLLEPKDQIQWKVIEGKELLEDGLKTEETTEKAKFRINPCASKEQIQQSGGKVAIEVETELGTALPRPIEFDVVFP
EHLTAEHETLGGMVKGVPAADMGFPRDGDPAHGVSAQLLVSIHPLDVCFKGIRVIEKDKGYVGAAGSLAQPHAADSVWSV
GLDNRFGLHDNIGIKSGVNGHMQWDEIQGYDADGHPVYKHSYPNEFTWNCLFRTYGGDENKEGISDIATVFQNFYIESKG
EGLFYARIRKFLVDTKKKDECSVERTSGGDHIFKP
>Mature_355_residues
MQAFHGPCLVRTVAIFILFSSFSLLHAEDEEFSDIMELVSETENCSAKLARDKNATEEQKKEDRKRRKIGIGETVTVTLN
CKKPFLLEPKDQIQWKVIEGKELLEDGLKTEETTEKAKFRINPCASKEQIQQSGGKVAIEVETELGTALPRPIEFDVVFP
EHLTAEHETLGGMVKGVPAADMGFPRDGDPAHGVSAQLLVSIHPLDVCFKGIRVIEKDKGYVGAAGSLAQPHAADSVWSV
GLDNRFGLHDNIGIKSGVNGHMQWDEIQGYDADGHPVYKHSYPNEFTWNCLFRTYGGDENKEGISDIATVFQNFYIESKG
EGLFYARIRKFLVDTKKKDECSVERTSGGDHIFKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39548; Mature: 39548

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAFHGPCLVRTVAIFILFSSFSLLHAEDEEFSDIMELVSETENCSAKLARDKNATEEQK
CCCCCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHH
KEDRKRRKIGIGETVTVTLNCKKPFLLEPKDQIQWKVIEGKELLEDGLKTEETTEKAKFR
HHHHHHHHCCCCCEEEEEEECCCCCEECCCCCEEEEEECCHHHHHCCCCCCCHHHHHEEE
INPCASKEQIQQSGGKVAIEVETELGTALPRPIEFDVVFPEHLTAEHETLGGMVKGVPAA
ECCCCCHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCHHHCHHHHHHHHHHCCCCCC
DMGFPRDGDPAHGVSAQLLVSIHPLDVCFKGIRVIEKDKGYVGAAGSLAQPHAADSVWSV
CCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHEEECCCCCEECCCCCCCCCCCCCCEEC
GLDNRFGLHDNIGIKSGVNGHMQWDEIQGYDADGHPVYKHSYPNEFTWNCLFRTYGGDEN
CCCCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCC
KEGISDIATVFQNFYIESKGEGLFYARIRKFLVDTKKKDECSVERTSGGDHIFKP
CCHHHHHHHHHHHHEEECCCCEEHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MQAFHGPCLVRTVAIFILFSSFSLLHAEDEEFSDIMELVSETENCSAKLARDKNATEEQK
CCCCCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHH
KEDRKRRKIGIGETVTVTLNCKKPFLLEPKDQIQWKVIEGKELLEDGLKTEETTEKAKFR
HHHHHHHHCCCCCEEEEEEECCCCCEECCCCCEEEEEECCHHHHHCCCCCCCHHHHHEEE
INPCASKEQIQQSGGKVAIEVETELGTALPRPIEFDVVFPEHLTAEHETLGGMVKGVPAA
ECCCCCHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCHHHCHHHHHHHHHHCCCCCC
DMGFPRDGDPAHGVSAQLLVSIHPLDVCFKGIRVIEKDKGYVGAAGSLAQPHAADSVWSV
CCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHEEECCCCCEECCCCCCCCCCCCCCEEC
GLDNRFGLHDNIGIKSGVNGHMQWDEIQGYDADGHPVYKHSYPNEFTWNCLFRTYGGDEN
CCCCCCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCC
KEGISDIATVFQNFYIESKGEGLFYARIRKFLVDTKKKDECSVERTSGGDHIFKP
CCHHHHHHHHHHHHEEECCCCEEHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA