Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736376

Identifier: 187736376

GI number: 187736376

Start: 2299388

End: 2299741

Strand: Direct

Name: 187736376

Synonym: Amuc_1893

Alternate gene names: NA

Gene position: 2299388-2299741 (Clockwise)

Preceding gene: 187736375

Following gene: 187736378

Centisome position: 86.31

GC content: 58.47

Gene sequence:

>354_bases
ATGCGTATGGAAGACGGCGGAAAAGCGGTGCGGTATGAATGCACCAGATGCGGCGCGTGCTGCCGCTGGGCCGGGGATGT
GTGCGTTGAGACGGATGAAATCCGCGAGATTTCCCGTTTCCTGGACATGGACGAACAGGTTTTTATTGACACATGCTGCC
GGTTGAGAGCCAACCGGCGCGGATTGTCCATCCGGGACGCGGAAGATGGCGCCTGCATGATGCTGACGAAAGACGGCTGC
CGGATCAATCCCGTTAAACCCCGCCAGTGCCGGGATTTTCCCAACAAATGGAATTTTCCCGGCTGGCGGGATTTGTGCCG
CGCCAGAGAAGTGGGGGAGGAACGGGAAGCATAA

Upstream 100 bases:

>100_bases
CATCGGGAAATTGCCGCAGGATTTTGAACATGCCGTCAATAGCCCGCGATGGAGGAACGCCCATATGAACATAGGCGTCA
TCAGGGGAATTTTCACTTAA

Downstream 100 bases:

>100_bases
TATGGCCGGAATGCCGCAAGATTCTTTTCTGCTTCCGGCATTATTCCATGGACGGGGTGAAATCCGGCTGGAATCTTGCG
TTTTTTACAGGAACTGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MRMEDGGKAVRYECTRCGACCRWAGDVCVETDEIREISRFLDMDEQVFIDTCCRLRANRRGLSIRDAEDGACMMLTKDGC
RINPVKPRQCRDFPNKWNFPGWRDLCRAREVGEEREA

Sequences:

>Translated_117_residues
MRMEDGGKAVRYECTRCGACCRWAGDVCVETDEIREISRFLDMDEQVFIDTCCRLRANRRGLSIRDAEDGACMMLTKDGC
RINPVKPRQCRDFPNKWNFPGWRDLCRAREVGEEREA
>Mature_117_residues
MRMEDGGKAVRYECTRCGACCRWAGDVCVETDEIREISRFLDMDEQVFIDTCCRLRANRRGLSIRDAEDGACMMLTKDGC
RINPVKPRQCRDFPNKWNFPGWRDLCRAREVGEEREA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13618; Mature: 13618

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
13.7 %Cys+Met (Translated Protein)
9.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
13.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMEDGGKAVRYECTRCGACCRWAGDVCVETDEIREISRFLDMDEQVFIDTCCRLRANRR
CCCCCCCCEEEEHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
GLSIRDAEDGACMMLTKDGCRINPVKPRQCRDFPNKWNFPGWRDLCRAREVGEEREA
CCEEEECCCCEEEEEECCCCEECCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRMEDGGKAVRYECTRCGACCRWAGDVCVETDEIREISRFLDMDEQVFIDTCCRLRANRR
CCCCCCCCEEEEHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
GLSIRDAEDGACMMLTKDGCRINPVKPRQCRDFPNKWNFPGWRDLCRAREVGEEREA
CCEEEECCCCEEEEEECCCCEECCCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA