Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736301
Identifier: 187736301
GI number: 187736301
Start: 2201521
End: 2201967
Strand: Direct
Name: 187736301
Synonym: Amuc_1814
Alternate gene names: NA
Gene position: 2201521-2201967 (Clockwise)
Preceding gene: 187736298
Following gene: 187736302
Centisome position: 82.64
GC content: 59.51
Gene sequence:
>447_bases ATGACCATGTCCGTTTTCCCTTTCCTGCGTCTTGTCTCCGTTTGCGGCGCCGCTCTTATGGGTTCTTCCTGTCTGCCCAT GTTTGGCGCCGGGCAGGTGCTGGCGGGAAGCAGCCTCGCGGAAGGTCTGCTGCCCTCTTCCTCTCTGGATCTTGTGTGGA GGGGAGACATCCGTTCTTTTCCCTCTTCCGGTTTGAGGACGCCCCGCGGGTTCAAAGTTTCTCCCGCGGATTCTTATTCC CTGCTGATGGAAGCGCGCCCGGGGATTGCCGGAGAGTGGGCCTGCTATCATGACCGCAGCAATTACTACTGGGCTTTTGT AGCCGGAAAGAAGGAGGAAGAAGCGGGGCTTTACGCCGTGCGCCGCGGCGTGGCCGTAAGCGGCATTTCCGGAGAAATTG AAGATGCCCCCGCCGTGCAGGATGCTCAGCCATTCTCCGCCATGTAA
Upstream 100 bases:
>100_bases AAACGGCCTTTTTCCCCCAGTTTCAGAGAGAGGGCTGTTTTTGATTGACTGTGGAAGCTTTTGGAGGTTGAGTCCTTTCC GCCTTTTTCAGAAGCACGCC
Downstream 100 bases:
>100_bases GCACAGGTTCTGGTCTTTTTGCAAAAAATGCTGCCGGAACCCCGTTTTCCGGCAAGTTGGACACGATAGGTTTGACAGGC AGCTGTTATTGCGGGCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTMSVFPFLRLVSVCGAALMGSSCLPMFGAGQVLAGSSLAEGLLPSSSLDLVWRGDIRSFPSSGLRTPRGFKVSPADSYS LLMEARPGIAGEWACYHDRSNYYWAFVAGKKEEEAGLYAVRRGVAVSGISGEIEDAPAVQDAQPFSAM
Sequences:
>Translated_148_residues MTMSVFPFLRLVSVCGAALMGSSCLPMFGAGQVLAGSSLAEGLLPSSSLDLVWRGDIRSFPSSGLRTPRGFKVSPADSYS LLMEARPGIAGEWACYHDRSNYYWAFVAGKKEEEAGLYAVRRGVAVSGISGEIEDAPAVQDAQPFSAM >Mature_147_residues TMSVFPFLRLVSVCGAALMGSSCLPMFGAGQVLAGSSLAEGLLPSSSLDLVWRGDIRSFPSSGLRTPRGFKVSPADSYSL LMEARPGIAGEWACYHDRSNYYWAFVAGKKEEEAGLYAVRRGVAVSGISGEIEDAPAVQDAQPFSAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15719; Mature: 15588
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSVFPFLRLVSVCGAALMGSSCLPMFGAGQVLAGSSLAEGLLPSSSLDLVWRGDIRSF CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHCCCCCCCCCEEECCCCCCC PSSGLRTPRGFKVSPADSYSLLMEARPGIAGEWACYHDRSNYYWAFVAGKKEEEAGLYAV CCCCCCCCCCCEECCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHH RRGVAVSGISGEIEDAPAVQDAQPFSAM HCCEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TMSVFPFLRLVSVCGAALMGSSCLPMFGAGQVLAGSSLAEGLLPSSSLDLVWRGDIRSF CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHCCCCCCCCCEEECCCCCCC PSSGLRTPRGFKVSPADSYSLLMEARPGIAGEWACYHDRSNYYWAFVAGKKEEEAGLYAV CCCCCCCCCCCEECCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHH RRGVAVSGISGEIEDAPAVQDAQPFSAM HCCEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA